RNA–Protein interactions for RNA: ENST00000589923.1

GRN-216, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 437 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-216ENST00000589923 PLCH2O75038 1416 aa18.38■□□□□ 0.53
GRN-216ENST00000589923 SCAPERQ9BY12 1400 aa18.38■□□□□ 0.53
GRN-216ENST00000589923 KIF14Q15058 1648 aa18.36■□□□□ 0.53
GRN-216ENST00000589923 MYO5CQ9NQX4 1742 aa18.36■□□□□ 0.53
GRN-216ENST00000589923 PREX1Q8TCU6 1659 aa18.35■□□□□ 0.53
GRN-216ENST00000589923 MLECQ14165 292 aa18.34■□□□□ 0.53
GRN-216ENST00000589923 ATP10AO60312 1499 aa18.33■□□□□ 0.52
GRN-216ENST00000589923 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
GRN-216ENST00000589923 STRCQ7RTU9 1775 aa18.32■□□□□ 0.52
GRN-216ENST00000589923 LRRIQ1Q96JM4 1722 aa18.32■□□□□ 0.52
GRN-216ENST00000589923 KDM5CP41229 1560 aa18.31■□□□□ 0.52
GRN-216ENST00000589923 CERKQ8TCT0 537 aa18.3■□□□□ 0.52
GRN-216ENST00000589923 ARHGAP35Q9NRY4 1499 aa18.29■□□□□ 0.52
GRN-216ENST00000589923 DIP2CQ9Y2E4 1556 aa18.28■□□□□ 0.52
GRN-216ENST00000589923 CEBPAP49715 358 aaPredicted RBP18.26■□□□□ 0.51
GRN-216ENST00000589923 ABCA6Q8N139 1617 aa18.26■□□□□ 0.51
GRN-216ENST00000589923 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
GRN-216ENST00000589923 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
GRN-216ENST00000589923 REREQ9P2R6 1566 aa18.24■□□□□ 0.51
GRN-216ENST00000589923 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
GRN-216ENST00000589923 ARHGAP5Q13017 1502 aa18.23■□□□□ 0.51
GRN-216ENST00000589923 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
GRN-216ENST00000589923 C3P01024 1663 aa18.22■□□□□ 0.51
GRN-216ENST00000589923 EFCAB2Q5VUJ9 269 aa18.22■□□□□ 0.51
GRN-216ENST00000589923 AFAP1Q8N556 730 aa18.21■□□□□ 0.51
GRN-216ENST00000589923 PREX2Q70Z35 1606 aa18.19■□□□□ 0.5
GRN-216ENST00000589923 ABCC1P33527 1531 aa18.18■□□□□ 0.5
GRN-216ENST00000589923 UHRF1BP1Q6BDS2 1440 aa18.17■□□□□ 0.5
GRN-216ENST00000589923 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
GRN-216ENST00000589923 MLH3Q9UHC1 1453 aa18.17■□□□□ 0.5
GRN-216ENST00000589923 ITSN2Q9NZM3 1697 aa18.17■□□□□ 0.5
GRN-216ENST00000589923 SETD1BQ9UPS6 1966 aaKnown RBP18.17■□□□□ 0.5
GRN-216ENST00000589923 ATP1B4Q9UN42 357 aaPredicted RBP18.16■□□□□ 0.5
GRN-216ENST00000589923 TRAPPC8Q9Y2L5 1435 aa18.15■□□□□ 0.5
GRN-216ENST00000589923 KIDINS220Q9ULH0 1771 aa18.15■□□□□ 0.5
GRN-216ENST00000589923 AGLP35573 1532 aa18.15■□□□□ 0.5
GRN-216ENST00000589923 LTBP4Q8N2S1 1624 aa18.13■□□□□ 0.49
GRN-216ENST00000589923 ILDR2Q71H61 639 aa18.13■□□□□ 0.49
GRN-216ENST00000589923 CLIP1P30622 1438 aa18.13■□□□□ 0.49
GRN-216ENST00000589923 CDC42BPAQ5VT25 1732 aa18.12■□□□□ 0.49
GRN-216ENST00000589923 CDK11AQ9UQ88 783 aaPredicted RBP18.12■□□□□ 0.49
GRN-216ENST00000589923 UBTFP17480 764 aaKnown RBP18.11■□□□□ 0.49
GRN-216ENST00000589923 PTPRTO14522 1441 aa18.11■□□□□ 0.49
GRN-216ENST00000589923 NCOA1Q15788 1441 aa18.07■□□□□ 0.48
GRN-216ENST00000589923 DISP3Q9P2K9 1392 aa18.07■□□□□ 0.48
GRN-216ENST00000589923 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
GRN-216ENST00000589923 SAMD9LQ8IVG5 1584 aa18.07■□□□□ 0.48
GRN-216ENST00000589923 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
GRN-216ENST00000589923 MROH2AA6NES4 1674 aa18.06■□□□□ 0.48
GRN-216ENST00000589923 SPATA31D1Q6ZQQ2 1576 aa18.05■□□□□ 0.48
GRN-216ENST00000589923 CCDC18Q5T9S5 1454 aa18.05■□□□□ 0.48
GRN-216ENST00000589923 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
GRN-216ENST00000589923 SYCP2Q9BX26 1530 aa18.03■□□□□ 0.48
GRN-216ENST00000589923 CNTLNQ9NXG0 1405 aa18.02■□□□□ 0.48
GRN-216ENST00000589923 CAMSAP1Q5T5Y3 1602 aa18.01■□□□□ 0.47
GRN-216ENST00000589923 PLXNC1O60486 1568 aa18.01■□□□□ 0.47
GRN-216ENST00000589923 IQSEC2Q5JU85 1478 aa18.01■□□□□ 0.47
GRN-216ENST00000589923 SUPT6HQ7KZ85 1726 aaKnown RBP18■□□□□ 0.47
GRN-216ENST00000589923 INO80Q9ULG1 1556 aaPredicted RBP18■□□□□ 0.47
GRN-216ENST00000589923 ZNF142P52746 1687 aaPredicted RBP17.99■□□□□ 0.47
GRN-216ENST00000589923 NPATQ14207 1427 aa17.99■□□□□ 0.47
GRN-216ENST00000589923 SOCS7O14512 581 aa17.99■□□□□ 0.47
GRN-216ENST00000589923 MYO3AQ8NEV4 1616 aa17.98■□□□□ 0.47
GRN-216ENST00000589923 FYCO1Q9BQS8 1478 aa17.98■□□□□ 0.47
GRN-216ENST00000589923 CLTCQ00610 1675 aaKnown RBP17.98■□□□□ 0.47
GRN-216ENST00000589923 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
GRN-216ENST00000589923 CHIC1Q5VXU3 224 aa17.96■□□□□ 0.47
GRN-216ENST00000589923 ATP7AQ04656 1500 aa17.96■□□□□ 0.47
GRN-216ENST00000589923 ZMYM3Q14202 1370 aa17.94■□□□□ 0.46
GRN-216ENST00000589923 CEP170BQ9Y4F5 1589 aaPredicted RBP17.93■□□□□ 0.46
GRN-216ENST00000589923 ESF1Q9H501 851 aaKnown RBP17.93■□□□□ 0.46
GRN-216ENST00000589923 PTPRKQ15262 1439 aa17.91■□□□□ 0.46
GRN-216ENST00000589923 PLA2R1Q13018 1463 aa17.91■□□□□ 0.46
GRN-216ENST00000589923 TCOF1Q13428 1488 aaKnown RBP17.91■□□□□ 0.46
GRN-216ENST00000589923 ZNF335Q9H4Z2 1342 aaPredicted RBP17.91■□□□□ 0.46
GRN-216ENST00000589923 NCKAP5LQ9HCH0 1330 aa17.91■□□□□ 0.46
GRN-216ENST00000589923 HNRNPMP52272 730 aaKnown RBP eCLIP17.9■□□□□ 0.46
GRN-216ENST00000589923 ZNF777Q9ULD5 760 aaPredicted RBP17.9■□□□□ 0.46
GRN-216ENST00000589923 SPAG9O60271 1321 aaKnown RBP17.9■□□□□ 0.46
GRN-216ENST00000589923 KIAA1107Q9UPP5 1409 aa17.89■□□□□ 0.46
GRN-216ENST00000589923 A2MP01023 1474 aa17.89■□□□□ 0.45
GRN-216ENST00000589923 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
GRN-216ENST00000589923 TIAM1Q13009 1591 aa17.85■□□□□ 0.45
GRN-216ENST00000589923 PLEKHH2Q8IVE3 1493 aa17.84■□□□□ 0.45
GRN-216ENST00000589923 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.45
GRN-216ENST00000589923 NEURL4Q96JN8 1562 aa17.83■□□□□ 0.44
GRN-216ENST00000589923 MBD5Q9P267 1494 aa17.82■□□□□ 0.44
GRN-216ENST00000589923 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
GRN-216ENST00000589923 ZNF644Q9H582 1327 aaPredicted RBP17.8■□□□□ 0.44
GRN-216ENST00000589923 CFDP1Q9UEE9 299 aaPredicted RBP17.8■□□□□ 0.44
GRN-216ENST00000589923 POLR1AO95602 1720 aaPredicted RBP17.8■□□□□ 0.44
GRN-216ENST00000589923 A2ML1A8K2U0 1454 aa17.8■□□□□ 0.44
GRN-216ENST00000589923 UBAP1LF5GYI3 381 aa17.79■□□□□ 0.44
GRN-216ENST00000589923 PKD2Q13563 968 aa17.79■□□□□ 0.44
GRN-216ENST00000589923 GGT6Q6P531 493 aa17.79■□□□□ 0.44
GRN-216ENST00000589923 PPP6R1Q9UPN7 881 aa17.75■□□□□ 0.43
GRN-216ENST00000589923 EHBP1L1Q8N3D4 1523 aa17.75■□□□□ 0.43
GRN-216ENST00000589923 MTUS2Q5JR59 1369 aa17.75■□□□□ 0.43
GRN-216ENST00000589923 RTEL1-TNFRSF6BF6WH68 1400 aa17.74■□□□□ 0.43
GRN-216ENST00000589923 ALKQ9UM73 1620 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms