RNA–Protein interactions for RNA: ENST00000586569.2

TNFRSF11A-202, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 8,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-202ENST00000586569 CARD11Q9BXL7 1154 aa18.48■□□□□ 0.55
TNFRSF11A-202ENST00000586569 TPM3P06753 285 aa18.48■□□□□ 0.55
TNFRSF11A-202ENST00000586569 KRI1Q8N9T8 703 aaKnown RBP18.48■□□□□ 0.55
TNFRSF11A-202ENST00000586569 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
TNFRSF11A-202ENST00000586569 CCDC34Q96HJ3 373 aa18.46■□□□□ 0.55
TNFRSF11A-202ENST00000586569 SLKQ9H2G2 1235 aaPredicted RBP18.46■□□□□ 0.55
TNFRSF11A-202ENST00000586569 PES1O00541 588 aaKnown RBP18.45■□□□□ 0.54
TNFRSF11A-202ENST00000586569 ABCC9O60706 1549 aa18.45■□□□□ 0.54
TNFRSF11A-202ENST00000586569 VPS53Q5VIR6 699 aa18.43■□□□□ 0.54
TNFRSF11A-202ENST00000586569 CCAR2Q8N163 923 aaKnown RBP18.43■□□□□ 0.54
TNFRSF11A-202ENST00000586569 ZNF330Q9Y3S2 320 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF11A-202ENST00000586569 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF11A-202ENST00000586569 RTF1Q92541 710 aaKnown RBP18.41■□□□□ 0.54
TNFRSF11A-202ENST00000586569 GOLGA6L3A6NEY3 463 aa18.41■□□□□ 0.54
TNFRSF11A-202ENST00000586569 HSP90AA2PQ14568 343 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF11A-202ENST00000586569 RRP12Q5JTH9 1297 aaKnown RBP18.4■□□□□ 0.54
TNFRSF11A-202ENST00000586569 GORABQ5T7V8 394 aa18.38■□□□□ 0.53
TNFRSF11A-202ENST00000586569 CSPP1Q1MSJ5 1256 aa18.38■□□□□ 0.53
TNFRSF11A-202ENST00000586569 TPD52L1Q16890 204 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF11A-202ENST00000586569 CALD1Q05682 793 aaKnown RBP18.37■□□□□ 0.53
TNFRSF11A-202ENST00000586569 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
TNFRSF11A-202ENST00000586569 TAF7LQ5H9L4 462 aa18.36■□□□□ 0.53
TNFRSF11A-202ENST00000586569 MARCH6O60337 910 aa18.36■□□□□ 0.53
TNFRSF11A-202ENST00000586569 TSR1Q2NL82 804 aaKnown RBP18.36■□□□□ 0.53
TNFRSF11A-202ENST00000586569 ZNF771Q7L3S4 317 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF11A-202ENST00000586569 TRIM6-TRIM34B2RNG4 842 aa18.35■□□□□ 0.53
TNFRSF11A-202ENST00000586569 NOL8Q76FK4 1167 aaKnown RBP18.34■□□□□ 0.53
TNFRSF11A-202ENST00000586569 G3V3G9 751 aa18.34■□□□□ 0.53
TNFRSF11A-202ENST00000586569 DCAF8Q5TAQ9 597 aa18.34■□□□□ 0.53
TNFRSF11A-202ENST00000586569 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.53
TNFRSF11A-202ENST00000586569 PHF14O94880 888 aa18.33■□□□□ 0.53
TNFRSF11A-202ENST00000586569 GPATCH3Q96I76 525 aa18.32■□□□□ 0.52
TNFRSF11A-202ENST00000586569 CCDC70Q6NSX1 233 aa18.31■□□□□ 0.52
TNFRSF11A-202ENST00000586569 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF11A-202ENST00000586569 GPS2Q13227 327 aa18.31■□□□□ 0.52
TNFRSF11A-202ENST00000586569 RBM19Q9Y4C8 960 aaKnown RBP18.31■□□□□ 0.52
TNFRSF11A-202ENST00000586569 SF3A1Q15459 793 aaKnown RBP18.3■□□□□ 0.52
TNFRSF11A-202ENST00000586569 MFAP1P55081 439 aaKnown RBP18.3■□□□□ 0.52
TNFRSF11A-202ENST00000586569 FOXD4L5Q5VV16 416 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF11A-202ENST00000586569 FOXD4L4Q8WXT5 416 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF11A-202ENST00000586569 ITPRIPQ8IWB1 547 aa18.29■□□□□ 0.52
TNFRSF11A-202ENST00000586569 DCAF1Q9Y4B6 1507 aa18.29■□□□□ 0.52
TNFRSF11A-202ENST00000586569 IPO8O15397 1037 aaKnown RBP18.28■□□□□ 0.52
TNFRSF11A-202ENST00000586569 SRPK2P78362 688 aaKnown RBP18.28■□□□□ 0.52
TNFRSF11A-202ENST00000586569 VSIG10Q8N0Z9 540 aa18.28■□□□□ 0.52
TNFRSF11A-202ENST00000586569 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.51
TNFRSF11A-202ENST00000586569 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
TNFRSF11A-202ENST00000586569 TPM2P07951 284 aa18.25■□□□□ 0.51
TNFRSF11A-202ENST00000586569 ZNF592Q92610 1267 aa18.25■□□□□ 0.51
TNFRSF11A-202ENST00000586569 GOLGA6L19H0YKK7 550 aa18.25■□□□□ 0.51
TNFRSF11A-202ENST00000586569 MORC1Q86VD1 984 aa18.24■□□□□ 0.51
TNFRSF11A-202ENST00000586569 TPM1P09493 284 aa18.23■□□□□ 0.51
TNFRSF11A-202ENST00000586569 KIF16BQ96L93 1317 aa18.23■□□□□ 0.51
TNFRSF11A-202ENST00000586569 SAFB2Q14151 953 aaKnown RBP eCLIP18.22■□□□□ 0.51
TNFRSF11A-202ENST00000586569 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF11A-202ENST00000586569 TMF1P82094 1093 aa18.21■□□□□ 0.51
TNFRSF11A-202ENST00000586569 H3BQV1 296 aa18.21■□□□□ 0.51
TNFRSF11A-202ENST00000586569 IFFO2Q5TF58 517 aa18.21■□□□□ 0.51
TNFRSF11A-202ENST00000586569 RWDD1Q9H446 243 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF11A-202ENST00000586569 FRAT2O75474 233 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF11A-202ENST00000586569 PCMTD1Q96MG8 357 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF11A-202ENST00000586569 PLEKHD1A6NEE1 506 aa18.2■□□□□ 0.5
TNFRSF11A-202ENST00000586569 TEX35Q5T0J7 233 aa18.2■□□□□ 0.5
TNFRSF11A-202ENST00000586569 TCEAL9Q9UHQ7 104 aa18.19■□□□□ 0.5
TNFRSF11A-202ENST00000586569 FOXD4L6Q3SYB3 417 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF11A-202ENST00000586569 FOXD4L3Q6VB84 417 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF11A-202ENST00000586569 CSB-PGBD3P0DP91 1061 aa18.18■□□□□ 0.5
TNFRSF11A-202ENST00000586569 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
TNFRSF11A-202ENST00000586569 MAP7D2Q96T17 732 aa18.17■□□□□ 0.5
TNFRSF11A-202ENST00000586569 BECN2A8MW95 431 aa18.16■□□□□ 0.5
TNFRSF11A-202ENST00000586569 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF11A-202ENST00000586569 KIF3AQ9Y496 699 aa18.15■□□□□ 0.5
TNFRSF11A-202ENST00000586569 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
TNFRSF11A-202ENST00000586569 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.15■□□□□ 0.5
TNFRSF11A-202ENST00000586569 ST18O60284 1047 aa18.15■□□□□ 0.5
TNFRSF11A-202ENST00000586569 PMFBP1Q8TBY8 1022 aa18.14■□□□□ 0.49
TNFRSF11A-202ENST00000586569 SLC4A10Q6U841 1118 aa18.14■□□□□ 0.49
TNFRSF11A-202ENST00000586569 FAM184AQ8NB25 1140 aa18.13■□□□□ 0.49
TNFRSF11A-202ENST00000586569 CFDP1Q9UEE9 299 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF11A-202ENST00000586569 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
TNFRSF11A-202ENST00000586569 RUFY1Q96T51 708 aa18.13■□□□□ 0.49
TNFRSF11A-202ENST00000586569 AKAP17AQ02040 695 aaKnown RBP18.12■□□□□ 0.49
TNFRSF11A-202ENST00000586569 IPO7O95373 1038 aaKnown RBP18.11■□□□□ 0.49
TNFRSF11A-202ENST00000586569 STK31Q9BXU1 1019 aa18.11■□□□□ 0.49
TNFRSF11A-202ENST00000586569 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
TNFRSF11A-202ENST00000586569 DCAF11Q8TEB1 546 aa18.11■□□□□ 0.49
TNFRSF11A-202ENST00000586569 RAD21O60216 631 aa18.1■□□□□ 0.49
TNFRSF11A-202ENST00000586569 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
TNFRSF11A-202ENST00000586569 NOM1Q5C9Z4 860 aaKnown RBP18.1■□□□□ 0.49
TNFRSF11A-202ENST00000586569 STK26Q9P289 416 aa18.1■□□□□ 0.49
TNFRSF11A-202ENST00000586569 HOMER1Q86YM7 354 aa18.1■□□□□ 0.49
TNFRSF11A-202ENST00000586569 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
TNFRSF11A-202ENST00000586569 MCTP1Q6DN14 999 aa18.09■□□□□ 0.49
TNFRSF11A-202ENST00000586569 AK7Q96M32 723 aa18.09■□□□□ 0.49
TNFRSF11A-202ENST00000586569 DDX11L8A8MPP1 907 aa18.09■□□□□ 0.49
TNFRSF11A-202ENST00000586569 APPP05067 770 aa18.09■□□□□ 0.49
TNFRSF11A-202ENST00000586569 HMMRO75330 724 aa18.09■□□□□ 0.49
TNFRSF11A-202ENST00000586569 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.09■□□□□ 0.49
TNFRSF11A-202ENST00000586569 SIN3AQ96ST3 1273 aa18.08■□□□□ 0.48
TNFRSF11A-202ENST00000586569 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms