RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 EHMT2Q96KQ7 1210 aa19.87■□□□□ 0.77
BRCA1-225ENST00000586385 MLECQ14165 292 aa19.83■□□□□ 0.77
BRCA1-225ENST00000586385 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
BRCA1-225ENST00000586385 FMN1Q68DA7 1419 aa19.83■□□□□ 0.76
BRCA1-225ENST00000586385 UBTFP17480 764 aaKnown RBP19.82■□□□□ 0.76
BRCA1-225ENST00000586385 KIF14Q15058 1648 aa19.8■□□□□ 0.76
BRCA1-225ENST00000586385 ATP10AO60312 1499 aa19.8■□□□□ 0.76
BRCA1-225ENST00000586385 EFCAB2Q5VUJ9 269 aa19.8■□□□□ 0.76
BRCA1-225ENST00000586385 ATP1B4Q9UN42 357 aaPredicted RBP19.8■□□□□ 0.76
BRCA1-225ENST00000586385 ARHGEF12Q9NZN5 1544 aa19.8■□□□□ 0.76
BRCA1-225ENST00000586385 TROQ12816 1431 aaPredicted RBP19.78■□□□□ 0.76
BRCA1-225ENST00000586385 C9orf84Q5VXU9 1444 aa19.77■□□□□ 0.76
BRCA1-225ENST00000586385 CHIC1Q5VXU3 224 aa19.76■□□□□ 0.75
BRCA1-225ENST00000586385 AFAP1Q8N556 730 aa19.76■□□□□ 0.75
BRCA1-225ENST00000586385 MYO5CQ9NQX4 1742 aa19.74■□□□□ 0.75
BRCA1-225ENST00000586385 CDK11AQ9UQ88 783 aaPredicted RBP19.74■□□□□ 0.75
BRCA1-225ENST00000586385 FER1L4A9Z1Z3 1794 aa19.74■□□□□ 0.75
BRCA1-225ENST00000586385 KDM5CP41229 1560 aa19.74■□□□□ 0.75
BRCA1-225ENST00000586385 CEBPAP49715 358 aaPredicted RBP19.73■□□□□ 0.75
BRCA1-225ENST00000586385 ZNF518AQ6AHZ1 1483 aa19.73■□□□□ 0.75
BRCA1-225ENST00000586385 LRRIQ1Q96JM4 1722 aa19.72■□□□□ 0.75
BRCA1-225ENST00000586385 ARHGAP5Q13017 1502 aa19.71■□□□□ 0.75
BRCA1-225ENST00000586385 DIP2CQ9Y2E4 1556 aa19.69■□□□□ 0.74
BRCA1-225ENST00000586385 CLIP1P30622 1438 aa19.68■□□□□ 0.74
BRCA1-225ENST00000586385 CERKQ8TCT0 537 aa19.67■□□□□ 0.74
BRCA1-225ENST00000586385 TRAPPC8Q9Y2L5 1435 aa19.67■□□□□ 0.74
BRCA1-225ENST00000586385 MLH3Q9UHC1 1453 aa19.65■□□□□ 0.74
BRCA1-225ENST00000586385 CASKIN1Q8WXD9 1431 aa19.64■□□□□ 0.73
BRCA1-225ENST00000586385 REREQ9P2R6 1566 aa19.64■□□□□ 0.73
BRCA1-225ENST00000586385 ABCA6Q8N139 1617 aa19.64■□□□□ 0.73
BRCA1-225ENST00000586385 CDC42BPBQ9Y5S2 1711 aa19.64■□□□□ 0.73
BRCA1-225ENST00000586385 ABCC1P33527 1531 aa19.63■□□□□ 0.73
BRCA1-225ENST00000586385 PREX1Q8TCU6 1659 aa19.62■□□□□ 0.73
BRCA1-225ENST00000586385 PREX2Q70Z35 1606 aa19.61■□□□□ 0.73
BRCA1-225ENST00000586385 AGLP35573 1532 aa19.6■□□□□ 0.73
BRCA1-225ENST00000586385 STRCQ7RTU9 1775 aa19.59■□□□□ 0.73
BRCA1-225ENST00000586385 CCDC18Q5T9S5 1454 aa19.58■□□□□ 0.72
BRCA1-225ENST00000586385 MYT1LQ9UL68 1186 aa19.57■□□□□ 0.72
BRCA1-225ENST00000586385 UHRF1BP1Q6BDS2 1440 aa19.57■□□□□ 0.72
BRCA1-225ENST00000586385 ITSN2Q9NZM3 1697 aa19.56■□□□□ 0.72
BRCA1-225ENST00000586385 KIDINS220Q9ULH0 1771 aa19.55■□□□□ 0.72
BRCA1-225ENST00000586385 C3P01024 1663 aa19.53■□□□□ 0.72
BRCA1-225ENST00000586385 CDC42BPAQ5VT25 1732 aa19.52■□□□□ 0.72
BRCA1-225ENST00000586385 FYCO1Q9BQS8 1478 aa19.52■□□□□ 0.72
BRCA1-225ENST00000586385 GPATCH8Q9UKJ3 1502 aaKnown RBP19.51■□□□□ 0.71
BRCA1-225ENST00000586385 SAMD9LQ8IVG5 1584 aa19.51■□□□□ 0.71
BRCA1-225ENST00000586385 SETD1BQ9UPS6 1966 aaKnown RBP19.5■□□□□ 0.71
BRCA1-225ENST00000586385 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
BRCA1-225ENST00000586385 PTPRTO14522 1441 aa19.49■□□□□ 0.71
BRCA1-225ENST00000586385 SYCP2Q9BX26 1530 aa19.48■□□□□ 0.71
BRCA1-225ENST00000586385 HNRNPMP52272 730 aaKnown RBP eCLIP19.47■□□□□ 0.71
BRCA1-225ENST00000586385 ZNF777Q9ULD5 760 aaPredicted RBP19.47■□□□□ 0.71
BRCA1-225ENST00000586385 CNTLNQ9NXG0 1405 aa19.46■□□□□ 0.71
BRCA1-225ENST00000586385 NCOA1Q15788 1441 aa19.45■□□□□ 0.7
BRCA1-225ENST00000586385 SPAG9O60271 1321 aaKnown RBP19.44■□□□□ 0.7
BRCA1-225ENST00000586385 LTBP4Q8N2S1 1624 aa19.43■□□□□ 0.7
BRCA1-225ENST00000586385 KIAA1107Q9UPP5 1409 aa19.43■□□□□ 0.7
BRCA1-225ENST00000586385 ESF1Q9H501 851 aaKnown RBP19.43■□□□□ 0.7
BRCA1-225ENST00000586385 ZMYM3Q14202 1370 aa19.42■□□□□ 0.7
BRCA1-225ENST00000586385 NPATQ14207 1427 aa19.42■□□□□ 0.7
BRCA1-225ENST00000586385 PLXNC1O60486 1568 aa19.41■□□□□ 0.7
BRCA1-225ENST00000586385 ATP7AQ04656 1500 aa19.41■□□□□ 0.7
BRCA1-225ENST00000586385 INO80Q9ULG1 1556 aaPredicted RBP19.4■□□□□ 0.7
BRCA1-225ENST00000586385 CFDP1Q9UEE9 299 aaPredicted RBP19.39■□□□□ 0.69
BRCA1-225ENST00000586385 MROH2AA6NES4 1674 aa19.37■□□□□ 0.69
BRCA1-225ENST00000586385 A2MP01023 1474 aa19.37■□□□□ 0.69
BRCA1-225ENST00000586385 CCNB3Q8WWL7 1395 aa19.37■□□□□ 0.69
BRCA1-225ENST00000586385 ZNF644Q9H582 1327 aaPredicted RBP19.37■□□□□ 0.69
BRCA1-225ENST00000586385 PLEKHH2Q8IVE3 1493 aa19.36■□□□□ 0.69
BRCA1-225ENST00000586385 ILDR2Q71H61 639 aa19.36■□□□□ 0.69
BRCA1-225ENST00000586385 CAMSAP1Q5T5Y3 1602 aa19.36■□□□□ 0.69
BRCA1-225ENST00000586385 PTPRKQ15262 1439 aa19.35■□□□□ 0.69
BRCA1-225ENST00000586385 SUPT6HQ7KZ85 1726 aaKnown RBP19.35■□□□□ 0.69
BRCA1-225ENST00000586385 MBD5Q9P267 1494 aa19.35■□□□□ 0.69
BRCA1-225ENST00000586385 NCKAP5LQ9HCH0 1330 aa19.34■□□□□ 0.69
BRCA1-225ENST00000586385 MTUS2Q5JR59 1369 aa19.33■□□□□ 0.69
BRCA1-225ENST00000586385 TIAM1Q13009 1591 aa19.32■□□□□ 0.68
BRCA1-225ENST00000586385 DISP3Q9P2K9 1392 aa19.32■□□□□ 0.68
BRCA1-225ENST00000586385 CLTCQ00610 1675 aaKnown RBP19.31■□□□□ 0.68
BRCA1-225ENST00000586385 GGT6Q6P531 493 aa19.31■□□□□ 0.68
BRCA1-225ENST00000586385 IQSEC2Q5JU85 1478 aa19.3■□□□□ 0.68
BRCA1-225ENST00000586385 MYO3AQ8NEV4 1616 aa19.29■□□□□ 0.68
BRCA1-225ENST00000586385 ZNF335Q9H4Z2 1342 aaPredicted RBP19.29■□□□□ 0.68
BRCA1-225ENST00000586385 PLA2R1Q13018 1463 aa19.28■□□□□ 0.68
BRCA1-225ENST00000586385 TCOF1Q13428 1488 aaKnown RBP19.28■□□□□ 0.68
BRCA1-225ENST00000586385 ZNF142P52746 1687 aaPredicted RBP19.27■□□□□ 0.68
BRCA1-225ENST00000586385 CEP170BQ9Y4F5 1589 aaPredicted RBP19.27■□□□□ 0.67
BRCA1-225ENST00000586385 CEP162Q5TB80 1403 aa19.26■□□□□ 0.67
BRCA1-225ENST00000586385 EHBP1L1Q8N3D4 1523 aa19.25■□□□□ 0.67
BRCA1-225ENST00000586385 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
BRCA1-225ENST00000586385 RTEL1-TNFRSF6BF6WH68 1400 aa19.25■□□□□ 0.67
BRCA1-225ENST00000586385 DHX29Q7Z478 1369 aaKnown RBP19.24■□□□□ 0.67
BRCA1-225ENST00000586385 PKD2Q13563 968 aa19.24■□□□□ 0.67
BRCA1-225ENST00000586385 ADGBQ8N7X0 1667 aa19.23■□□□□ 0.67
BRCA1-225ENST00000586385 A2ML1A8K2U0 1454 aa19.21■□□□□ 0.67
BRCA1-225ENST00000586385 SPATA31D1Q6ZQQ2 1576 aa19.2■□□□□ 0.66
BRCA1-225ENST00000586385 FBXO31Q5XUX0 539 aaPredicted RBP19.2■□□□□ 0.66
BRCA1-225ENST00000586385 SOCS7O14512 581 aa19.19■□□□□ 0.66
BRCA1-225ENST00000586385 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
BRCA1-225ENST00000586385 DNMT1P26358 1616 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms