RNA–Protein interactions for RNA: ENST00000585850.1

ABCA8-206, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,502 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-206ENST00000585850 PPP1R15AO75807 674 aaPredicted RBP13.27□□□□□ -0.29
ABCA8-206ENST00000585850 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
ABCA8-206ENST00000585850 DISP1Q96F81 1524 aa13.27□□□□□ -0.29
ABCA8-206ENST00000585850 MAGI1Q96QZ7 1491 aaPredicted RBP13.26□□□□□ -0.29
ABCA8-206ENST00000585850 DSG3P32926 999 aa13.25□□□□□ -0.29
ABCA8-206ENST00000585850 TONSLQ96HA7 1378 aa13.24□□□□□ -0.29
ABCA8-206ENST00000585850 DNMT1P26358 1616 aaKnown RBP13.23□□□□□ -0.29
ABCA8-206ENST00000585850 ERCC6Q03468 1493 aa13.22□□□□□ -0.29
ABCA8-206ENST00000585850 ITSN2Q9NZM3 1697 aa13.22□□□□□ -0.29
ABCA8-206ENST00000585850 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.3
ABCA8-206ENST00000585850 CEP170Q5SW79 1584 aa13.2□□□□□ -0.3
ABCA8-206ENST00000585850 SYNJ2O15056 1496 aa13.2□□□□□ -0.3
ABCA8-206ENST00000585850 NUP153P49790 1475 aaKnown RBP13.2□□□□□ -0.3
ABCA8-206ENST00000585850 KDM6BO15054 1643 aa13.2□□□□□ -0.3
ABCA8-206ENST00000585850 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
ABCA8-206ENST00000585850 CAPN15O75808 1086 aa13.18□□□□□ -0.3
ABCA8-206ENST00000585850 KDM5BQ9UGL1 1544 aa13.18□□□□□ -0.3
ABCA8-206ENST00000585850 ROCK1Q13464 1354 aa13.18□□□□□ -0.3
ABCA8-206ENST00000585850 DAPK1P53355 1430 aa13.17□□□□□ -0.3
ABCA8-206ENST00000585850 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
ABCA8-206ENST00000585850 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
ABCA8-206ENST00000585850 CDK11AQ9UQ88 783 aaPredicted RBP13.15□□□□□ -0.3
ABCA8-206ENST00000585850 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
ABCA8-206ENST00000585850 NUP160Q12769 1436 aa13.14□□□□□ -0.31
ABCA8-206ENST00000585850 TROQ12816 1431 aaPredicted RBP13.14□□□□□ -0.31
ABCA8-206ENST00000585850 DDX10Q13206 875 aaKnown RBP13.14□□□□□ -0.31
ABCA8-206ENST00000585850 CHIC2Q9UKJ5 165 aa13.13□□□□□ -0.31
ABCA8-206ENST00000585850 ABCC5O15440 1437 aa13.13□□□□□ -0.31
ABCA8-206ENST00000585850 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
ABCA8-206ENST00000585850 CHMP7Q8WUX9 453 aaPredicted RBP13.11□□□□□ -0.31
ABCA8-206ENST00000585850 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
ABCA8-206ENST00000585850 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
ABCA8-206ENST00000585850 ABCA8O94911 1581 aa13.1□□□□□ -0.31
ABCA8-206ENST00000585850 KIF14Q15058 1648 aa13.09□□□□□ -0.31
ABCA8-206ENST00000585850 ARID3CA6NKF2 412 aa13.09□□□□□ -0.31
ABCA8-206ENST00000585850 CDC42BPAQ5VT25 1732 aa13.09□□□□□ -0.31
ABCA8-206ENST00000585850 CAMSAP2Q08AD1 1489 aa13.09□□□□□ -0.31
ABCA8-206ENST00000585850 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.31
ABCA8-206ENST00000585850 PLB1Q6P1J6 1458 aa13.08□□□□□ -0.32
ABCA8-206ENST00000585850 POLR1AO95602 1720 aaPredicted RBP13.08□□□□□ -0.32
ABCA8-206ENST00000585850 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
ABCA8-206ENST00000585850 ADGRL2O95490 1459 aa13.07□□□□□ -0.32
ABCA8-206ENST00000585850 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
ABCA8-206ENST00000585850 ANP32CO43423 234 aa13.06□□□□□ -0.32
ABCA8-206ENST00000585850 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
ABCA8-206ENST00000585850 RPRD2Q5VT52 1461 aaKnown RBP13.05□□□□□ -0.32
ABCA8-206ENST00000585850 HIRIP3Q9BW71 556 aaPredicted RBP13.05□□□□□ -0.32
ABCA8-206ENST00000585850 JPH4Q96JJ6 628 aa13.04□□□□□ -0.32
ABCA8-206ENST00000585850 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
ABCA8-206ENST00000585850 ANKRD30BQ9BXX2 1392 aa13.04□□□□□ -0.32
ABCA8-206ENST00000585850 ZNF644Q9H582 1327 aaPredicted RBP13.03□□□□□ -0.32
ABCA8-206ENST00000585850 TEX14Q8IWB6 1497 aa13.02□□□□□ -0.33
ABCA8-206ENST00000585850 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
ABCA8-206ENST00000585850 SUPT16HQ9Y5B9 1047 aaKnown RBP13.01□□□□□ -0.33
ABCA8-206ENST00000585850 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
ABCA8-206ENST00000585850 PZPP20742 1482 aa13.01□□□□□ -0.33
ABCA8-206ENST00000585850 ABCC10Q5T3U5 1492 aa13.01□□□□□ -0.33
ABCA8-206ENST00000585850 SHANK2Q9UPX8 1470 aa13□□□□□ -0.33
ABCA8-206ENST00000585850 FBLN2P98095 1184 aa13□□□□□ -0.33
ABCA8-206ENST00000585850 CHD1O14646 1710 aa13□□□□□ -0.33
ABCA8-206ENST00000585850 ATP10BO94823 1461 aa12.99□□□□□ -0.33
ABCA8-206ENST00000585850 HSPA5P11021 654 aaKnown RBP12.99□□□□□ -0.33
ABCA8-206ENST00000585850 EIF4G2P78344 907 aaKnown RBP eCLIP12.98□□□□□ -0.33
ABCA8-206ENST00000585850 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
ABCA8-206ENST00000585850 ANKRD30AQ9BXX3 1397 aa12.98□□□□□ -0.33
ABCA8-206ENST00000585850 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
ABCA8-206ENST00000585850 ARHGEF5Q12774 1597 aa12.97□□□□□ -0.33
ABCA8-206ENST00000585850 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.33
ABCA8-206ENST00000585850 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.34
ABCA8-206ENST00000585850 SHROOM2Q13796 1616 aa12.95□□□□□ -0.34
ABCA8-206ENST00000585850 PREX2Q70Z35 1606 aa12.95□□□□□ -0.34
ABCA8-206ENST00000585850 CDC42BPBQ9Y5S2 1711 aa12.95□□□□□ -0.34
ABCA8-206ENST00000585850 KDM5DQ9BY66 1539 aa12.95□□□□□ -0.34
ABCA8-206ENST00000585850 CNTLNQ9NXG0 1405 aa12.94□□□□□ -0.34
ABCA8-206ENST00000585850 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
ABCA8-206ENST00000585850 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
ABCA8-206ENST00000585850 MBD5Q9P267 1494 aa12.93□□□□□ -0.34
ABCA8-206ENST00000585850 ANKRD50Q9ULJ7 1429 aa12.92□□□□□ -0.34
ABCA8-206ENST00000585850 ZNF777Q9ULD5 760 aaPredicted RBP12.92□□□□□ -0.34
ABCA8-206ENST00000585850 CCDC7Q96M83 1385 aa12.92□□□□□ -0.34
ABCA8-206ENST00000585850 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
ABCA8-206ENST00000585850 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
ABCA8-206ENST00000585850 PTPRGP23470 1445 aa12.9□□□□□ -0.34
ABCA8-206ENST00000585850 NBPF8Q3BBV2 869 aa12.9□□□□□ -0.34
ABCA8-206ENST00000585850 SAMD9LQ8IVG5 1584 aa12.9□□□□□ -0.34
ABCA8-206ENST00000585850 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
ABCA8-206ENST00000585850 ABCB7O75027 752 aa12.89□□□□□ -0.35
ABCA8-206ENST00000585850 MAST1Q9Y2H9 1570 aa12.88□□□□□ -0.35
ABCA8-206ENST00000585850 MYO5CQ9NQX4 1742 aa12.88□□□□□ -0.35
ABCA8-206ENST00000585850 POTEHQ6S545 545 aa12.88□□□□□ -0.35
ABCA8-206ENST00000585850 ARHGEF12Q9NZN5 1544 aa12.87□□□□□ -0.35
ABCA8-206ENST00000585850 CCDC141Q6ZP82 1450 aa12.86□□□□□ -0.35
ABCA8-206ENST00000585850 KDM5CP41229 1560 aa12.86□□□□□ -0.35
ABCA8-206ENST00000585850 TSPY4P0CV99 314 aa12.86□□□□□ -0.35
ABCA8-206ENST00000585850 TSPY10P0CW01 314 aa12.86□□□□□ -0.35
ABCA8-206ENST00000585850 UHRF1BP1Q6BDS2 1440 aa12.85□□□□□ -0.35
ABCA8-206ENST00000585850 PKD2Q13563 968 aa12.85□□□□□ -0.35
ABCA8-206ENST00000585850 NEFLP07196 543 aa12.84□□□□□ -0.35
ABCA8-206ENST00000585850 RSPH4AQ5TD94 716 aa12.84□□□□□ -0.35
ABCA8-206ENST00000585850 BCORL1Q5H9F3 1711 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms