RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 ZFYVE16Q7Z3T8 1539 aa15□□□□□ -0.01
CDK5RAP3-224ENST00000582275 YEATS2Q9ULM3 1422 aa15□□□□□ -0.01
CDK5RAP3-224ENST00000582275 TTC37Q6PGP7 1564 aa14.98□□□□□ -0.01
CDK5RAP3-224ENST00000582275 FER1L4A9Z1Z3 1794 aa14.96□□□□□ -0.01
CDK5RAP3-224ENST00000582275 SPATA31D1Q6ZQQ2 1576 aa14.96□□□□□ -0.01
CDK5RAP3-224ENST00000582275 MLECQ14165 292 aa14.95□□□□□ -0.02
CDK5RAP3-224ENST00000582275 PREX1Q8TCU6 1659 aa14.95□□□□□ -0.02
CDK5RAP3-224ENST00000582275 NUP153P49790 1475 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-224ENST00000582275 SAMD9Q5K651 1589 aa14.94□□□□□ -0.02
CDK5RAP3-224ENST00000582275 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-224ENST00000582275 SETD1BQ9UPS6 1966 aaKnown RBP14.92□□□□□ -0.02
CDK5RAP3-224ENST00000582275 ARHGEF12Q9NZN5 1544 aa14.92□□□□□ -0.02
CDK5RAP3-224ENST00000582275 UHRF1BP1Q6BDS2 1440 aa14.92□□□□□ -0.02
CDK5RAP3-224ENST00000582275 C9orf84Q5VXU9 1444 aa14.91□□□□□ -0.02
CDK5RAP3-224ENST00000582275 ATP10AO60312 1499 aa14.9□□□□□ -0.02
CDK5RAP3-224ENST00000582275 HECW1Q76N89 1606 aa14.9□□□□□ -0.02
CDK5RAP3-224ENST00000582275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.9□□□□□ -0.02
CDK5RAP3-224ENST00000582275 PTPRTO14522 1441 aa14.9□□□□□ -0.02
CDK5RAP3-224ENST00000582275 IQSEC2Q5JU85 1478 aa14.89□□□□□ -0.03
CDK5RAP3-224ENST00000582275 SCAPERQ9BY12 1400 aa14.88□□□□□ -0.03
CDK5RAP3-224ENST00000582275 SIGLEC1Q9BZZ2 1709 aa14.88□□□□□ -0.03
CDK5RAP3-224ENST00000582275 STRCQ7RTU9 1775 aa14.87□□□□□ -0.03
CDK5RAP3-224ENST00000582275 PLCH2O75038 1416 aa14.85□□□□□ -0.03
CDK5RAP3-224ENST00000582275 CEBPAP49715 358 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-224ENST00000582275 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-224ENST00000582275 EFCAB2Q5VUJ9 269 aa14.83□□□□□ -0.04
CDK5RAP3-224ENST00000582275 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
CDK5RAP3-224ENST00000582275 ESF1Q9H501 851 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-224ENST00000582275 ZNF518AQ6AHZ1 1483 aa14.8□□□□□ -0.04
CDK5RAP3-224ENST00000582275 LTBP4Q8N2S1 1624 aa14.79□□□□□ -0.04
CDK5RAP3-224ENST00000582275 TRAPPC8Q9Y2L5 1435 aa14.77□□□□□ -0.04
CDK5RAP3-224ENST00000582275 MYT1LQ9UL68 1186 aa14.77□□□□□ -0.05
CDK5RAP3-224ENST00000582275 CDK11AQ9UQ88 783 aaPredicted RBP14.77□□□□□ -0.05
CDK5RAP3-224ENST00000582275 RANGAP1P46060 587 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-224ENST00000582275 NCOA1Q15788 1441 aa14.75□□□□□ -0.05
CDK5RAP3-224ENST00000582275 REREQ9P2R6 1566 aa14.75□□□□□ -0.05
CDK5RAP3-224ENST00000582275 MYO5CQ9NQX4 1742 aa14.74□□□□□ -0.05
CDK5RAP3-224ENST00000582275 CNTLNQ9NXG0 1405 aa14.74□□□□□ -0.05
CDK5RAP3-224ENST00000582275 KDM5CP41229 1560 aa14.73□□□□□ -0.05
CDK5RAP3-224ENST00000582275 C3P01024 1663 aa14.72□□□□□ -0.05
CDK5RAP3-224ENST00000582275 EEA1Q15075 1411 aa14.72□□□□□ -0.05
CDK5RAP3-224ENST00000582275 AGLP35573 1532 aa14.71□□□□□ -0.05
CDK5RAP3-224ENST00000582275 CDK13Q14004 1512 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-224ENST00000582275 UBAP1LF5GYI3 381 aa14.71□□□□□ -0.05
CDK5RAP3-224ENST00000582275 AFAP1Q8N556 730 aa14.71□□□□□ -0.05
CDK5RAP3-224ENST00000582275 MLH3Q9UHC1 1453 aa14.69□□□□□ -0.06
CDK5RAP3-224ENST00000582275 DIP2CQ9Y2E4 1556 aa14.69□□□□□ -0.06
CDK5RAP3-224ENST00000582275 NPATQ14207 1427 aa14.69□□□□□ -0.06
CDK5RAP3-224ENST00000582275 ARHGAP5Q13017 1502 aa14.69□□□□□ -0.06
CDK5RAP3-224ENST00000582275 CLIP1P30622 1438 aa14.67□□□□□ -0.06
CDK5RAP3-224ENST00000582275 KIF14Q15058 1648 aa14.67□□□□□ -0.06
CDK5RAP3-224ENST00000582275 PKD2Q13563 968 aa14.67□□□□□ -0.06
CDK5RAP3-224ENST00000582275 FMN1Q68DA7 1419 aa14.66□□□□□ -0.06
CDK5RAP3-224ENST00000582275 CAMSAP1Q5T5Y3 1602 aa14.66□□□□□ -0.06
CDK5RAP3-224ENST00000582275 ATP1B4Q9UN42 357 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-224ENST00000582275 TROQ12816 1431 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-224ENST00000582275 ZNF335Q9H4Z2 1342 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-224ENST00000582275 ABCA6Q8N139 1617 aa14.63□□□□□ -0.07
CDK5RAP3-224ENST00000582275 PLA2R1Q13018 1463 aa14.63□□□□□ -0.07
CDK5RAP3-224ENST00000582275 MROH2AA6NES4 1674 aa14.61□□□□□ -0.07
CDK5RAP3-224ENST00000582275 NCKAP5LQ9HCH0 1330 aa14.61□□□□□ -0.07
CDK5RAP3-224ENST00000582275 ZMYM3Q14202 1370 aa14.6□□□□□ -0.07
CDK5RAP3-224ENST00000582275 CNKSR2Q8WXI2 1034 aa14.6□□□□□ -0.07
CDK5RAP3-224ENST00000582275 TOM1O60784 492 aa14.59□□□□□ -0.07
CDK5RAP3-224ENST00000582275 ABCC1P33527 1531 aa14.57□□□□□ -0.08
CDK5RAP3-224ENST00000582275 MED1Q15648 1581 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-224ENST00000582275 TCOF1Q13428 1488 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-224ENST00000582275 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-224ENST00000582275 ZNF142P52746 1687 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-224ENST00000582275 CDC42BPBQ9Y5S2 1711 aa14.55□□□□□ -0.08
CDK5RAP3-224ENST00000582275 HSPA1LP34931 641 aa14.55□□□□□ -0.08
CDK5RAP3-224ENST00000582275 KIDINS220Q9ULH0 1771 aa14.55□□□□□ -0.08
CDK5RAP3-224ENST00000582275 KCNA4P22459 653 aa14.54□□□□□ -0.08
CDK5RAP3-224ENST00000582275 POTEDQ86YR6 584 aa14.54□□□□□ -0.08
CDK5RAP3-224ENST00000582275 PREX2Q70Z35 1606 aa14.54□□□□□ -0.08
CDK5RAP3-224ENST00000582275 ITSN2Q9NZM3 1697 aa14.54□□□□□ -0.08
CDK5RAP3-224ENST00000582275 CEP170BQ9Y4F5 1589 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-224ENST00000582275 CPS1P31327 1500 aa14.53□□□□□ -0.08
CDK5RAP3-224ENST00000582275 SUPT6HQ7KZ85 1726 aaKnown RBP14.52□□□□□ -0.08
CDK5RAP3-224ENST00000582275 MYO3AQ8NEV4 1616 aa14.52□□□□□ -0.08
CDK5RAP3-224ENST00000582275 PIP4K2BP78356 416 aa14.52□□□□□ -0.09
CDK5RAP3-224ENST00000582275 SPAG9O60271 1321 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-224ENST00000582275 UBTFP17480 764 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-224ENST00000582275 PTPRKQ15262 1439 aa14.5□□□□□ -0.09
CDK5RAP3-224ENST00000582275 SAMD9LQ8IVG5 1584 aa14.49□□□□□ -0.09
CDK5RAP3-224ENST00000582275 CCDC18Q5T9S5 1454 aa14.49□□□□□ -0.09
CDK5RAP3-224ENST00000582275 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
CDK5RAP3-224ENST00000582275 CLTCQ00610 1675 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-224ENST00000582275 A2ML1A8K2U0 1454 aa14.47□□□□□ -0.09
CDK5RAP3-224ENST00000582275 SHANK2Q9UPX8 1470 aa14.46□□□□□ -0.09
CDK5RAP3-224ENST00000582275 A2MP01023 1474 aa14.45□□□□□ -0.1
CDK5RAP3-224ENST00000582275 PLEKHH2Q8IVE3 1493 aa14.45□□□□□ -0.1
CDK5RAP3-224ENST00000582275 GGT6Q6P531 493 aa14.45□□□□□ -0.1
CDK5RAP3-224ENST00000582275 ZNF777Q9ULD5 760 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-224ENST00000582275 KIAA1107Q9UPP5 1409 aa14.44□□□□□ -0.1
CDK5RAP3-224ENST00000582275 ATP7AQ04656 1500 aa14.44□□□□□ -0.1
CDK5RAP3-224ENST00000582275 PLXNC1O60486 1568 aa14.43□□□□□ -0.1
CDK5RAP3-224ENST00000582275 CDC42BPAQ5VT25 1732 aa14.43□□□□□ -0.1
CDK5RAP3-224ENST00000582275 SYCP2Q9BX26 1530 aa14.42□□□□□ -0.1
CDK5RAP3-224ENST00000582275 DNMT1P26358 1616 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms