RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 ABCC9O60706 1549 aa6.48□□□□□ -1.37
NF1-219ENST00000579081 HIRIP3Q9BW71 556 aaPredicted RBP6.47□□□□□ -1.37
NF1-219ENST00000579081 RTN4Q9NQC3 1192 aaKnown RBP6.47□□□□□ -1.37
NF1-219ENST00000579081 MTUS2Q5JR59 1369 aa6.47□□□□□ -1.37
NF1-219ENST00000579081 TNNT3P45378 269 aaPredicted RBP6.47□□□□□ -1.37
NF1-219ENST00000579081 HTATSF1O43719 755 aaKnown RBP6.46□□□□□ -1.37
NF1-219ENST00000579081 SENP3-EIF4A1A0A087X0R7 540 aa6.46□□□□□ -1.37
NF1-219ENST00000579081 TPM4P67936 248 aa6.46□□□□□ -1.37
NF1-219ENST00000579081 CLIP1P30622 1438 aa6.46□□□□□ -1.38
NF1-219ENST00000579081 GOLGA6L1Q8N7Z2 621 aa6.46□□□□□ -1.38
NF1-219ENST00000579081 TSPYL1Q9H0U9 437 aa6.46□□□□□ -1.38
NF1-219ENST00000579081 RRP7BPQ9NSQ0 103 aa6.46□□□□□ -1.38
NF1-219ENST00000579081 G3V3G9 751 aa6.46□□□□□ -1.38
NF1-219ENST00000579081 DCAF8Q5TAQ9 597 aa6.46□□□□□ -1.38
NF1-219ENST00000579081 PLEKHD1A6NEE1 506 aa6.45□□□□□ -1.38
NF1-219ENST00000579081 KIAA1211Q6ZU35 1233 aa6.45□□□□□ -1.38
NF1-219ENST00000579081 CCDC34Q96HJ3 373 aa6.45□□□□□ -1.38
NF1-219ENST00000579081 PDIA4P13667 645 aaKnown RBP6.44□□□□□ -1.38
NF1-219ENST00000579081 RTF1Q92541 710 aaKnown RBP6.44□□□□□ -1.38
NF1-219ENST00000579081 KTN1Q86UP2 1357 aaKnown RBP6.44□□□□□ -1.38
NF1-219ENST00000579081 CARD11Q9BXL7 1154 aa6.44□□□□□ -1.38
NF1-219ENST00000579081 SOX12O15370 315 aa6.44□□□□□ -1.38
NF1-219ENST00000579081 HDGFP51858 240 aaKnown RBP6.44□□□□□ -1.38
NF1-219ENST00000579081 ZNF330Q9Y3S2 320 aaPredicted RBP6.44□□□□□ -1.38
NF1-219ENST00000579081 RASSF8Q8NHQ8 419 aa6.44□□□□□ -1.38
NF1-219ENST00000579081 CSB-PGBD3P0DP91 1061 aa6.43□□□□□ -1.38
NF1-219ENST00000579081 HSP90B1P14625 803 aaKnown RBP6.43□□□□□ -1.38
NF1-219ENST00000579081 MARCH6O60337 910 aa6.43□□□□□ -1.38
NF1-219ENST00000579081 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.43□□□□□ -1.38
NF1-219ENST00000579081 CCDC9Q9Y3X0 531 aaKnown RBP6.43□□□□□ -1.38
NF1-219ENST00000579081 GORABQ5T7V8 394 aa6.42□□□□□ -1.38
NF1-219ENST00000579081 KLHL34Q8N239 644 aa6.42□□□□□ -1.38
NF1-219ENST00000579081 NACADO15069 1562 aa6.42□□□□□ -1.38
NF1-219ENST00000579081 VPS53Q5VIR6 699 aa6.41□□□□□ -1.38
NF1-219ENST00000579081 CAVIN1Q6NZI2 390 aaKnown RBP6.41□□□□□ -1.38
NF1-219ENST00000579081 SPRYD3Q8NCJ5 442 aa6.41□□□□□ -1.38
NF1-219ENST00000579081 FBXO3Q9UK99 471 aa6.41□□□□□ -1.38
NF1-219ENST00000579081 NOP58Q9Y2X3 529 aaKnown RBP6.41□□□□□ -1.38
NF1-219ENST00000579081 CCER2I3L3R5 266 aa6.41□□□□□ -1.38
NF1-219ENST00000579081 TPM3P06753 285 aa6.41□□□□□ -1.38
NF1-219ENST00000579081 TAF7LQ5H9L4 462 aa6.41□□□□□ -1.38
NF1-219ENST00000579081 SUPT16HQ9Y5B9 1047 aaKnown RBP6.41□□□□□ -1.38
NF1-219ENST00000579081 ROCK2O75116 1388 aaKnown RBP6.41□□□□□ -1.38
NF1-219ENST00000579081 TRHP20396 242 aaPredicted RBP6.41□□□□□ -1.38
NF1-219ENST00000579081 PPP4R2Q9NY27 417 aa6.41□□□□□ -1.38
NF1-219ENST00000579081 SCAPERQ9BY12 1400 aa6.41□□□□□ -1.38
NF1-219ENST00000579081 CREBRFQ8IUR6 639 aa6.41□□□□□ -1.38
NF1-219ENST00000579081 APBB1O00213 710 aa6.4□□□□□ -1.38
NF1-219ENST00000579081 BCL11BQ9C0K0 894 aaPredicted RBP6.4□□□□□ -1.38
NF1-219ENST00000579081 MIER1Q8N108 512 aa6.4□□□□□ -1.38
NF1-219ENST00000579081 CC2D1BQ5T0F9 858 aaKnown RBP6.4□□□□□ -1.38
NF1-219ENST00000579081 WWC1Q8IX03 1113 aa6.4□□□□□ -1.38
NF1-219ENST00000579081 RSF1Q96T23 1441 aaPredicted RBP6.4□□□□□ -1.39
NF1-219ENST00000579081 CNKSR2Q8WXI2 1034 aa6.4□□□□□ -1.39
NF1-219ENST00000579081 SYAP1Q96A49 352 aaPredicted RBP6.39□□□□□ -1.39
NF1-219ENST00000579081 GBP4Q96PP9 640 aa6.39□□□□□ -1.39
NF1-219ENST00000579081 SETQ01105 290 aaPredicted RBP6.39□□□□□ -1.39
NF1-219ENST00000579081 SRPK2P78362 688 aaKnown RBP6.39□□□□□ -1.39
NF1-219ENST00000579081 ZNF526Q8TF50 670 aaPredicted RBP6.39□□□□□ -1.39
NF1-219ENST00000579081 CHMP3Q9Y3E7 222 aa6.38□□□□□ -1.39
NF1-219ENST00000579081 TOMM22Q9NS69 142 aa6.38□□□□□ -1.39
NF1-219ENST00000579081 IPO8O15397 1037 aaKnown RBP6.38□□□□□ -1.39
NF1-219ENST00000579081 MLECQ14165 292 aa6.38□□□□□ -1.39
NF1-219ENST00000579081 MORC1Q86VD1 984 aa6.37□□□□□ -1.39
NF1-219ENST00000579081 FHAD1B1AJZ9 1412 aa6.37□□□□□ -1.39
NF1-219ENST00000579081 CFDP1Q9UEE9 299 aaPredicted RBP6.37□□□□□ -1.39
NF1-219ENST00000579081 FRAT2O75474 233 aaPredicted RBP6.37□□□□□ -1.39
NF1-219ENST00000579081 CSPP1Q1MSJ5 1256 aa6.37□□□□□ -1.39
NF1-219ENST00000579081 GPATCH3Q96I76 525 aa6.37□□□□□ -1.39
NF1-219ENST00000579081 PAK3O75914 559 aaPredicted RBP6.37□□□□□ -1.39
NF1-219ENST00000579081 TMF1P82094 1093 aa6.37□□□□□ -1.39
NF1-219ENST00000579081 HDAC5Q9UQL6 1122 aa6.36□□□□□ -1.39
NF1-219ENST00000579081 CTDP1Q9Y5B0 961 aaPredicted RBP6.36□□□□□ -1.39
NF1-219ENST00000579081 HDGFL2Q7Z4V5 671 aaPredicted RBP6.36□□□□□ -1.39
NF1-219ENST00000579081 KIF16BQ96L93 1317 aa6.36□□□□□ -1.39
NF1-219ENST00000579081 PATL2C9JE40 543 aaKnown RBP6.36□□□□□ -1.39
NF1-219ENST00000579081 GTF2E1P29083 439 aaPredicted RBP6.36□□□□□ -1.39
NF1-219ENST00000579081 AKNAQ7Z591 1439 aa6.36□□□□□ -1.39
NF1-219ENST00000579081 PES1O00541 588 aaKnown RBP6.36□□□□□ -1.39
NF1-219ENST00000579081 TPD52L1Q16890 204 aaPredicted RBP6.36□□□□□ -1.39
NF1-219ENST00000579081 CALD1Q05682 793 aaKnown RBP6.35□□□□□ -1.39
NF1-219ENST00000579081 EIF3AQ14152 1382 aaKnown RBP6.35□□□□□ -1.39
NF1-219ENST00000579081 TPM2P07951 284 aa6.35□□□□□ -1.39
NF1-219ENST00000579081 TSR1Q2NL82 804 aaKnown RBP6.35□□□□□ -1.39
NF1-219ENST00000579081 TCEAL9Q9UHQ7 104 aa6.35□□□□□ -1.39
NF1-219ENST00000579081 CEP164Q9UPV0 1460 aa6.35□□□□□ -1.39
NF1-219ENST00000579081 RB1CC1Q8TDY2 1594 aa6.35□□□□□ -1.39
NF1-219ENST00000579081 CCDC144AA2RUR9 1427 aa6.35□□□□□ -1.39
NF1-219ENST00000579081 SF3A1Q15459 793 aaKnown RBP6.35□□□□□ -1.39
NF1-219ENST00000579081 STK31Q9BXU1 1019 aa6.34□□□□□ -1.39
NF1-219ENST00000579081 WRNQ14191 1432 aaPredicted RBP eCLIP6.34□□□□□ -1.392e-6■■■■□ 22.3
NF1-219ENST00000579081 PHF14O94880 888 aa6.34□□□□□ -1.39
NF1-219ENST00000579081 SAFB2Q14151 953 aaKnown RBP eCLIP6.34□□□□□ -1.39
NF1-219ENST00000579081 RRP12Q5JTH9 1297 aaKnown RBP6.34□□□□□ -1.4
NF1-219ENST00000579081 KIF3AQ9Y496 699 aa6.34□□□□□ -1.4
NF1-219ENST00000579081 CWC22Q9HCG8 908 aaKnown RBP6.33□□□□□ -1.4
NF1-219ENST00000579081 KANK1Q14678 1352 aa6.33□□□□□ -1.4
NF1-219ENST00000579081 SKOR2Q2VWA4 1001 aaPredicted RBP6.33□□□□□ -1.4
NF1-219ENST00000579081 B4GALNT3Q6L9W6 998 aa6.33□□□□□ -1.4
NF1-219ENST00000579081 CCDC70Q6NSX1 233 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms