RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 KDM5BQ9UGL1 1544 aa13.34□□□□□ -0.27
CDK5RAP3-208ENST00000578525 FBLN2P98095 1184 aa13.34□□□□□ -0.27
CDK5RAP3-208ENST00000578525 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
CDK5RAP3-208ENST00000578525 ADGBQ8N7X0 1667 aa13.34□□□□□ -0.27
CDK5RAP3-208ENST00000578525 KIF14Q15058 1648 aa13.33□□□□□ -0.28
CDK5RAP3-208ENST00000578525 CAMSAP2Q08AD1 1489 aa13.33□□□□□ -0.28
CDK5RAP3-208ENST00000578525 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
CDK5RAP3-208ENST00000578525 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
CDK5RAP3-208ENST00000578525 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-208ENST00000578525 ADGRL2O95490 1459 aa13.29□□□□□ -0.28
CDK5RAP3-208ENST00000578525 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
CDK5RAP3-208ENST00000578525 ZNF644Q9H582 1327 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-208ENST00000578525 ABCC10Q5T3U5 1492 aa13.28□□□□□ -0.28
CDK5RAP3-208ENST00000578525 CHD1O14646 1710 aa13.26□□□□□ -0.29
CDK5RAP3-208ENST00000578525 ATP10BO94823 1461 aa13.26□□□□□ -0.29
CDK5RAP3-208ENST00000578525 DDX10Q13206 875 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-208ENST00000578525 CDC42BPAQ5VT25 1732 aa13.26□□□□□ -0.29
CDK5RAP3-208ENST00000578525 CFDP1Q9UEE9 299 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-208ENST00000578525 PELP1Q8IZL8 1130 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-208ENST00000578525 SHANK2Q9UPX8 1470 aa13.24□□□□□ -0.29
CDK5RAP3-208ENST00000578525 ANKRD30BQ9BXX2 1392 aa13.23□□□□□ -0.29
CDK5RAP3-208ENST00000578525 PLEKHD1A6NEE1 506 aa13.23□□□□□ -0.29
CDK5RAP3-208ENST00000578525 SHROOM2Q13796 1616 aa13.23□□□□□ -0.29
CDK5RAP3-208ENST00000578525 PZPP20742 1482 aa13.23□□□□□ -0.29
CDK5RAP3-208ENST00000578525 NCOA1Q15788 1441 aa13.22□□□□□ -0.29
CDK5RAP3-208ENST00000578525 RPRD2Q5VT52 1461 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-208ENST00000578525 PTPRGP23470 1445 aa13.22□□□□□ -0.29
CDK5RAP3-208ENST00000578525 ANKRD30AQ9BXX3 1397 aa13.21□□□□□ -0.29
CDK5RAP3-208ENST00000578525 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-208ENST00000578525 TEX14Q8IWB6 1497 aa13.2□□□□□ -0.3
CDK5RAP3-208ENST00000578525 ARHGEF5Q12774 1597 aa13.2□□□□□ -0.3
CDK5RAP3-208ENST00000578525 CCER2I3L3R5 266 aa13.19□□□□□ -0.3
CDK5RAP3-208ENST00000578525 ZNF777Q9ULD5 760 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-208ENST00000578525 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-208ENST00000578525 PREX2Q70Z35 1606 aa13.17□□□□□ -0.3
CDK5RAP3-208ENST00000578525 ANP32CO43423 234 aa13.17□□□□□ -0.3
CDK5RAP3-208ENST00000578525 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
CDK5RAP3-208ENST00000578525 C9orf84Q5VXU9 1444 aa13.16□□□□□ -0.3
CDK5RAP3-208ENST00000578525 KIAA1107Q9UPP5 1409 aa13.16□□□□□ -0.3
CDK5RAP3-208ENST00000578525 HSPA5P11021 654 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-208ENST00000578525 FOXD1Q16676 465 aa13.16□□□□□ -0.3
CDK5RAP3-208ENST00000578525 KDM5DQ9BY66 1539 aa13.16□□□□□ -0.3
CDK5RAP3-208ENST00000578525 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
CDK5RAP3-208ENST00000578525 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDK5RAP3-208ENST00000578525 KCNH8Q96L42 1107 aa13.14□□□□□ -0.31
CDK5RAP3-208ENST00000578525 SAMD9LQ8IVG5 1584 aa13.13□□□□□ -0.31
CDK5RAP3-208ENST00000578525 CDC42BPBQ9Y5S2 1711 aa13.13□□□□□ -0.31
CDK5RAP3-208ENST00000578525 ABCC2Q92887 1545 aa13.13□□□□□ -0.31
CDK5RAP3-208ENST00000578525 MBD5Q9P267 1494 aa13.12□□□□□ -0.31
CDK5RAP3-208ENST00000578525 CCDC141Q6ZP82 1450 aa13.11□□□□□ -0.31
CDK5RAP3-208ENST00000578525 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
CDK5RAP3-208ENST00000578525 CLASP1Q7Z460 1538 aa13.1□□□□□ -0.31
CDK5RAP3-208ENST00000578525 TSPY4P0CV99 314 aa13.09□□□□□ -0.31
CDK5RAP3-208ENST00000578525 TSPY10P0CW01 314 aa13.09□□□□□ -0.31
CDK5RAP3-208ENST00000578525 NBPF8Q3BBV2 869 aa13.09□□□□□ -0.31
CDK5RAP3-208ENST00000578525 ERCC6L2Q5T890 1561 aa13.09□□□□□ -0.31
CDK5RAP3-208ENST00000578525 CNTLNQ9NXG0 1405 aa13.09□□□□□ -0.31
CDK5RAP3-208ENST00000578525 WASHC2AQ641Q2 1341 aa13.09□□□□□ -0.31
CDK5RAP3-208ENST00000578525 POLR1AO95602 1720 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-208ENST00000578525 TTC37Q6PGP7 1564 aa13.08□□□□□ -0.32
CDK5RAP3-208ENST00000578525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.08□□□□□ -0.32
CDK5RAP3-208ENST00000578525 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
CDK5RAP3-208ENST00000578525 PKD2Q13563 968 aa13.07□□□□□ -0.32
CDK5RAP3-208ENST00000578525 RSPH4AQ5TD94 716 aa13.07□□□□□ -0.32
CDK5RAP3-208ENST00000578525 MYO5CQ9NQX4 1742 aa13.07□□□□□ -0.32
CDK5RAP3-208ENST00000578525 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
CDK5RAP3-208ENST00000578525 UHRF1BP1LA0JNW5 1464 aa13.06□□□□□ -0.32
CDK5RAP3-208ENST00000578525 PLEKHH2Q8IVE3 1493 aa13.06□□□□□ -0.32
CDK5RAP3-208ENST00000578525 ARHGAP5Q13017 1502 aa13.06□□□□□ -0.32
CDK5RAP3-208ENST00000578525 NUP155O75694 1391 aa13.06□□□□□ -0.32
CDK5RAP3-208ENST00000578525 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
CDK5RAP3-208ENST00000578525 SYCP2Q9BX26 1530 aa13.05□□□□□ -0.32
CDK5RAP3-208ENST00000578525 ARHGEF12Q9NZN5 1544 aa13.05□□□□□ -0.32
CDK5RAP3-208ENST00000578525 HNRNPMP52272 730 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDK5RAP3-208ENST00000578525 UNC13BO14795 1591 aa13.04□□□□□ -0.32
CDK5RAP3-208ENST00000578525 UHRF1BP1Q6BDS2 1440 aa13.04□□□□□ -0.32
CDK5RAP3-208ENST00000578525 PLXNC1O60486 1568 aa13.03□□□□□ -0.32
CDK5RAP3-208ENST00000578525 ZCCHC11Q5TAX3 1644 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-208ENST00000578525 SUPT16HQ9Y5B9 1047 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-208ENST00000578525 RALGAPBQ86X10 1494 aa13.01□□□□□ -0.33
CDK5RAP3-208ENST00000578525 FAM135AQ9P2D6 1515 aa13□□□□□ -0.33
CDK5RAP3-208ENST00000578525 KDM5CP41229 1560 aa12.99□□□□□ -0.33
CDK5RAP3-208ENST00000578525 C11orf95C9JLR9 678 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-208ENST00000578525 PLCH2O75038 1416 aa12.97□□□□□ -0.33
CDK5RAP3-208ENST00000578525 KIF7Q2M1P5 1343 aa12.97□□□□□ -0.33
CDK5RAP3-208ENST00000578525 IQGAP3Q86VI3 1631 aa12.97□□□□□ -0.33
CDK5RAP3-208ENST00000578525 DUOX2Q9NRD8 1548 aa12.97□□□□□ -0.33
CDK5RAP3-208ENST00000578525 USP47Q96K76 1375 aa12.96□□□□□ -0.33
CDK5RAP3-208ENST00000578525 ABCC1P33527 1531 aa12.96□□□□□ -0.33
CDK5RAP3-208ENST00000578525 ARAP3Q8WWN8 1544 aa12.95□□□□□ -0.34
CDK5RAP3-208ENST00000578525 BCORL1Q5H9F3 1711 aa12.95□□□□□ -0.34
CDK5RAP3-208ENST00000578525 ERBINQ96RT1 1412 aa12.95□□□□□ -0.34
CDK5RAP3-208ENST00000578525 ARID4BQ4LE39 1312 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-208ENST00000578525 MAGI2Q86UL8 1455 aa12.94□□□□□ -0.34
CDK5RAP3-208ENST00000578525 ZNF326Q5BKZ1 582 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-208ENST00000578525 EFCAB2Q5VUJ9 269 aa12.92□□□□□ -0.34
CDK5RAP3-208ENST00000578525 PRKRIP1Q9H875 184 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-208ENST00000578525 CCDC144AA2RUR9 1427 aa12.9□□□□□ -0.34
CDK5RAP3-208ENST00000578525 NEFLP07196 543 aa12.9□□□□□ -0.34
CDK5RAP3-208ENST00000578525 ROCK2O75116 1388 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms