RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
CTDNEP1-212ENST00000576613 PLPPR3Q6T4P5 718 aa19.38■□□□□ 0.69
CTDNEP1-212ENST00000576613 HSPA2P54652 639 aa19.35■□□□□ 0.69
CTDNEP1-212ENST00000576613 MLECQ14165 292 aa19.35■□□□□ 0.69
CTDNEP1-212ENST00000576613 ATP1B4Q9UN42 357 aaPredicted RBP19.35■□□□□ 0.69
CTDNEP1-212ENST00000576613 CDK11AQ9UQ88 783 aaPredicted RBP19.35■□□□□ 0.69
CTDNEP1-212ENST00000576613 KIF14Q15058 1648 aa19.34■□□□□ 0.69
CTDNEP1-212ENST00000576613 UBTFP17480 764 aaKnown RBP19.34■□□□□ 0.69
CTDNEP1-212ENST00000576613 EFCAB2Q5VUJ9 269 aa19.34■□□□□ 0.69
CTDNEP1-212ENST00000576613 ATP10AO60312 1499 aa19.34■□□□□ 0.69
CTDNEP1-212ENST00000576613 C9orf84Q5VXU9 1444 aa19.34■□□□□ 0.69
CTDNEP1-212ENST00000576613 ARHGEF12Q9NZN5 1544 aa19.32■□□□□ 0.68
CTDNEP1-212ENST00000576613 ZNF518AQ6AHZ1 1483 aa19.31■□□□□ 0.68
CTDNEP1-212ENST00000576613 PREX1Q8TCU6 1659 aa19.3■□□□□ 0.68
CTDNEP1-212ENST00000576613 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
CTDNEP1-212ENST00000576613 CLIP1P30622 1438 aa19.29■□□□□ 0.68
CTDNEP1-212ENST00000576613 ARHGAP5Q13017 1502 aa19.29■□□□□ 0.68
CTDNEP1-212ENST00000576613 TROQ12816 1431 aaPredicted RBP19.27■□□□□ 0.68
CTDNEP1-212ENST00000576613 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
CTDNEP1-212ENST00000576613 KDM5CP41229 1560 aa19.27■□□□□ 0.67
CTDNEP1-212ENST00000576613 CERKQ8TCT0 537 aa19.23■□□□□ 0.67
CTDNEP1-212ENST00000576613 LRRIQ1Q96JM4 1722 aa19.22■□□□□ 0.67
CTDNEP1-212ENST00000576613 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
CTDNEP1-212ENST00000576613 REREQ9P2R6 1566 aa19.22■□□□□ 0.67
CTDNEP1-212ENST00000576613 DIP2CQ9Y2E4 1556 aa19.21■□□□□ 0.67
CTDNEP1-212ENST00000576613 CDC42BPBQ9Y5S2 1711 aa19.2■□□□□ 0.66
CTDNEP1-212ENST00000576613 AFAP1Q8N556 730 aa19.2■□□□□ 0.66
CTDNEP1-212ENST00000576613 PREX2Q70Z35 1606 aa19.19■□□□□ 0.66
CTDNEP1-212ENST00000576613 UHRF1BP1Q6BDS2 1440 aa19.18■□□□□ 0.66
CTDNEP1-212ENST00000576613 CEBPAP49715 358 aaPredicted RBP19.18■□□□□ 0.66
CTDNEP1-212ENST00000576613 ABCA6Q8N139 1617 aa19.18■□□□□ 0.66
CTDNEP1-212ENST00000576613 CCDC18Q5T9S5 1454 aa19.17■□□□□ 0.66
CTDNEP1-212ENST00000576613 MLH3Q9UHC1 1453 aa19.17■□□□□ 0.66
CTDNEP1-212ENST00000576613 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
CTDNEP1-212ENST00000576613 ABCC1P33527 1531 aa19.16■□□□□ 0.66
CTDNEP1-212ENST00000576613 SETD1BQ9UPS6 1966 aaKnown RBP19.15■□□□□ 0.66
CTDNEP1-212ENST00000576613 STRCQ7RTU9 1775 aa19.15■□□□□ 0.66
CTDNEP1-212ENST00000576613 ITSN2Q9NZM3 1697 aa19.14■□□□□ 0.66
CTDNEP1-212ENST00000576613 AGLP35573 1532 aa19.14■□□□□ 0.65
CTDNEP1-212ENST00000576613 C3P01024 1663 aa19.14■□□□□ 0.65
CTDNEP1-212ENST00000576613 ESF1Q9H501 851 aaKnown RBP19.13■□□□□ 0.65
CTDNEP1-212ENST00000576613 CASKIN1Q8WXD9 1431 aa19.13■□□□□ 0.65
CTDNEP1-212ENST00000576613 TRAPPC8Q9Y2L5 1435 aa19.1■□□□□ 0.65
CTDNEP1-212ENST00000576613 CDC42BPAQ5VT25 1732 aa19.1■□□□□ 0.65
CTDNEP1-212ENST00000576613 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
CTDNEP1-212ENST00000576613 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
CTDNEP1-212ENST00000576613 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.64
CTDNEP1-212ENST00000576613 FYCO1Q9BQS8 1478 aa19.07■□□□□ 0.64
CTDNEP1-212ENST00000576613 PTPRTO14522 1441 aa19.06■□□□□ 0.64
CTDNEP1-212ENST00000576613 SAMD9LQ8IVG5 1584 aa19.03■□□□□ 0.64
CTDNEP1-212ENST00000576613 MROH2AA6NES4 1674 aa19.03■□□□□ 0.64
CTDNEP1-212ENST00000576613 SYCP2Q9BX26 1530 aa19■□□□□ 0.63
CTDNEP1-212ENST00000576613 ZNF777Q9ULD5 760 aaPredicted RBP18.99■□□□□ 0.63
CTDNEP1-212ENST00000576613 NPATQ14207 1427 aa18.99■□□□□ 0.63
CTDNEP1-212ENST00000576613 NCOA1Q15788 1441 aa18.99■□□□□ 0.63
CTDNEP1-212ENST00000576613 GPATCH8Q9UKJ3 1502 aaKnown RBP18.98■□□□□ 0.63
CTDNEP1-212ENST00000576613 SPAG9O60271 1321 aaKnown RBP18.98■□□□□ 0.63
CTDNEP1-212ENST00000576613 SUPT6HQ7KZ85 1726 aaKnown RBP18.97■□□□□ 0.63
CTDNEP1-212ENST00000576613 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
CTDNEP1-212ENST00000576613 DISP3Q9P2K9 1392 aa18.96■□□□□ 0.63
CTDNEP1-212ENST00000576613 ATP7AQ04656 1500 aa18.96■□□□□ 0.63
CTDNEP1-212ENST00000576613 IQSEC2Q5JU85 1478 aa18.96■□□□□ 0.63
CTDNEP1-212ENST00000576613 INO80Q9ULG1 1556 aaPredicted RBP18.95■□□□□ 0.62
CTDNEP1-212ENST00000576613 CAMSAP1Q5T5Y3 1602 aa18.95■□□□□ 0.62
CTDNEP1-212ENST00000576613 LTBP4Q8N2S1 1624 aa18.95■□□□□ 0.62
CTDNEP1-212ENST00000576613 KIAA1107Q9UPP5 1409 aa18.94■□□□□ 0.62
CTDNEP1-212ENST00000576613 ZMYM3Q14202 1370 aa18.93■□□□□ 0.62
CTDNEP1-212ENST00000576613 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
CTDNEP1-212ENST00000576613 CLTCQ00610 1675 aaKnown RBP18.93■□□□□ 0.62
CTDNEP1-212ENST00000576613 HNRNPMP52272 730 aaKnown RBP eCLIP18.92■□□□□ 0.62
CTDNEP1-212ENST00000576613 CFDP1Q9UEE9 299 aaPredicted RBP18.92■□□□□ 0.62
CTDNEP1-212ENST00000576613 CCNB3Q8WWL7 1395 aa18.92■□□□□ 0.62
CTDNEP1-212ENST00000576613 A2MP01023 1474 aa18.91■□□□□ 0.62
CTDNEP1-212ENST00000576613 ZNF142P52746 1687 aaPredicted RBP18.91■□□□□ 0.62
CTDNEP1-212ENST00000576613 MYO3AQ8NEV4 1616 aa18.9■□□□□ 0.62
CTDNEP1-212ENST00000576613 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
CTDNEP1-212ENST00000576613 SPATA31D1Q6ZQQ2 1576 aa18.89■□□□□ 0.61
CTDNEP1-212ENST00000576613 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
CTDNEP1-212ENST00000576613 CEP170BQ9Y4F5 1589 aaPredicted RBP18.87■□□□□ 0.61
CTDNEP1-212ENST00000576613 PLA2R1Q13018 1463 aa18.86■□□□□ 0.61
CTDNEP1-212ENST00000576613 PTPRKQ15262 1439 aa18.84■□□□□ 0.61
CTDNEP1-212ENST00000576613 GGT6Q6P531 493 aa18.84■□□□□ 0.61
CTDNEP1-212ENST00000576613 PPP6R1Q9UPN7 881 aa18.84■□□□□ 0.61
CTDNEP1-212ENST00000576613 NCKAP5LQ9HCH0 1330 aa18.83■□□□□ 0.61
CTDNEP1-212ENST00000576613 PKD2Q13563 968 aa18.83■□□□□ 0.6
CTDNEP1-212ENST00000576613 ILDR2Q71H61 639 aa18.83■□□□□ 0.6
CTDNEP1-212ENST00000576613 TIAM1Q13009 1591 aa18.83■□□□□ 0.6
CTDNEP1-212ENST00000576613 EHBP1L1Q8N3D4 1523 aa18.83■□□□□ 0.6
CTDNEP1-212ENST00000576613 SOCS7O14512 581 aa18.81■□□□□ 0.6
CTDNEP1-212ENST00000576613 TCOF1Q13428 1488 aaKnown RBP18.81■□□□□ 0.6
CTDNEP1-212ENST00000576613 ZNF335Q9H4Z2 1342 aaPredicted RBP18.8■□□□□ 0.6
CTDNEP1-212ENST00000576613 RTEL1-TNFRSF6BF6WH68 1400 aa18.79■□□□□ 0.6
CTDNEP1-212ENST00000576613 MBD5Q9P267 1494 aa18.77■□□□□ 0.6
CTDNEP1-212ENST00000576613 A2ML1A8K2U0 1454 aa18.77■□□□□ 0.59
CTDNEP1-212ENST00000576613 ZNF644Q9H582 1327 aaPredicted RBP18.76■□□□□ 0.59
CTDNEP1-212ENST00000576613 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
CTDNEP1-212ENST00000576613 UBAP1LF5GYI3 381 aa18.76■□□□□ 0.59
CTDNEP1-212ENST00000576613 DNMT1P26358 1616 aaKnown RBP18.75■□□□□ 0.59
CTDNEP1-212ENST00000576613 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
CTDNEP1-212ENST00000576613 DHX29Q7Z478 1369 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms