RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 MARCH6O60337 910 aa20.14■□□□□ 0.81
CACNA1A-202ENST00000573710 MSH5O43196 834 aa20.14■□□□□ 0.81
CACNA1A-202ENST00000573710 CCAR2Q8N163 923 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-202ENST00000573710 SETQ01105 290 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-202ENST00000573710 MCCP23508 829 aa20.13■□□□□ 0.81
CACNA1A-202ENST00000573710 GORABQ5T7V8 394 aa20.13■□□□□ 0.81
CACNA1A-202ENST00000573710 NUDCQ9Y266 331 aa20.12■□□□□ 0.81
CACNA1A-202ENST00000573710 FRAT2O75474 233 aaPredicted RBP20.11■□□□□ 0.81
CACNA1A-202ENST00000573710 APPP05067 770 aa20.11■□□□□ 0.81
CACNA1A-202ENST00000573710 SUPT16HQ9Y5B9 1047 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-202ENST00000573710 KIAA1211Q6ZU35 1233 aa20.1■□□□□ 0.81
CACNA1A-202ENST00000573710 VSIG10Q8N0Z9 540 aa20.08■□□□□ 0.81
CACNA1A-202ENST00000573710 RTF1Q92541 710 aaKnown RBP20.08■□□□□ 0.81
CACNA1A-202ENST00000573710 RRP12Q5JTH9 1297 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-202ENST00000573710 NOL8Q76FK4 1167 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-202ENST00000573710 BCL11BQ9C0K0 894 aaPredicted RBP20.07■□□□□ 0.8
CACNA1A-202ENST00000573710 TOMM22Q9NS69 142 aa20.07■□□□□ 0.8
CACNA1A-202ENST00000573710 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.06■□□□□ 0.87e-11■■■■■ 260.8
CACNA1A-202ENST00000573710 B4GALNT3Q6L9W6 998 aa20.06■□□□□ 0.8
CACNA1A-202ENST00000573710 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-202ENST00000573710 FOXD4L5Q5VV16 416 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-202ENST00000573710 FOXD4L4Q8WXT5 416 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-202ENST00000573710 SAMD1Q6SPF0 538 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-202ENST00000573710 TCEAL9Q9UHQ7 104 aa20.03■□□□□ 0.8
CACNA1A-202ENST00000573710 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.02■□□□□ 0.8
CACNA1A-202ENST00000573710 SRPK2P78362 688 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-202ENST00000573710 CWC22Q9HCG8 908 aaKnown RBP20.01■□□□□ 0.79
CACNA1A-202ENST00000573710 FOXD4L1Q9NU39 408 aa20.01■□□□□ 0.79
CACNA1A-202ENST00000573710 TPM4P67936 248 aa20.01■□□□□ 0.79
CACNA1A-202ENST00000573710 GTF2E1P29083 439 aaPredicted RBP20■□□□□ 0.79
CACNA1A-202ENST00000573710 STK26Q9P289 416 aa20■□□□□ 0.79
CACNA1A-202ENST00000573710 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
CACNA1A-202ENST00000573710 MTUS2Q5JR59 1369 aa19.98■□□□□ 0.79
CACNA1A-202ENST00000573710 TPD52L1Q16890 204 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-202ENST00000573710 DHX37Q8IY37 1157 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-202ENST00000573710 MIER1Q8N108 512 aa19.96■□□□□ 0.79
CACNA1A-202ENST00000573710 FBXW7Q969H0 707 aa19.96■□□□□ 0.79
CACNA1A-202ENST00000573710 TPM3P06753 285 aa19.96■□□□□ 0.79
CACNA1A-202ENST00000573710 AK7Q96M32 723 aa19.96■□□□□ 0.79
CACNA1A-202ENST00000573710 CARD11Q9BXL7 1154 aa19.96■□□□□ 0.79
CACNA1A-202ENST00000573710 TRIM6-TRIM34B2RNG4 842 aa19.95■□□□□ 0.78
CACNA1A-202ENST00000573710 CTDP1Q9Y5B0 961 aaPredicted RBP19.95■□□□□ 0.78
CACNA1A-202ENST00000573710 FOXD4L6Q3SYB3 417 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-202ENST00000573710 FOXD4L3Q6VB84 417 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-202ENST00000573710 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
CACNA1A-202ENST00000573710 DEKP35659 375 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-202ENST00000573710 PLCD4Q9BRC7 762 aa19.91■□□□□ 0.78
CACNA1A-202ENST00000573710 CDCA8Q53HL2 280 aa19.9■□□□□ 0.78
CACNA1A-202ENST00000573710 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
CACNA1A-202ENST00000573710 SLKQ9H2G2 1235 aaPredicted RBP19.89■□□□□ 0.78
CACNA1A-202ENST00000573710 CHMP4BQ9H444 224 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-202ENST00000573710 SKIDA1Q1XH10 827 aa19.89■□□□□ 0.77
CACNA1A-202ENST00000573710 TRIM34Q9BYJ4 488 aa19.88■□□□□ 0.77
CACNA1A-202ENST00000573710 PCMTD1Q96MG8 357 aaPredicted RBP19.88■□□□□ 0.77
CACNA1A-202ENST00000573710 PAF1Q8N7H5 531 aa19.87■□□□□ 0.77
CACNA1A-202ENST00000573710 ZNF592Q92610 1267 aa19.84■□□□□ 0.77
CACNA1A-202ENST00000573710 TSR1Q2NL82 804 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-202ENST00000573710 SLC4A10Q6U841 1118 aa19.83■□□□□ 0.76
CACNA1A-202ENST00000573710 ZNF771Q7L3S4 317 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-202ENST00000573710 LTV1Q96GA3 475 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-202ENST00000573710 ZFYVE27Q5T4F4 411 aa19.8■□□□□ 0.76
CACNA1A-202ENST00000573710 PLEKHD1A6NEE1 506 aa19.8■□□□□ 0.76
CACNA1A-202ENST00000573710 SF3A1Q15459 793 aaKnown RBP19.8■□□□□ 0.76
CACNA1A-202ENST00000573710 HTATSF1O43719 755 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 MS4A1P11836 297 aa19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 ITPRIPQ8IWB1 547 aa19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 MAP7D2Q96T17 732 aa19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 CCDC34Q96HJ3 373 aa19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 WDR70Q9NW82 654 aa19.79■□□□□ 0.76
CACNA1A-202ENST00000573710 GPATCH3Q96I76 525 aa19.78■□□□□ 0.76
CACNA1A-202ENST00000573710 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-202ENST00000573710 NUTM2FA1L443 756 aa19.77■□□□□ 0.76
CACNA1A-202ENST00000573710 MORC1Q86VD1 984 aa19.77■□□□□ 0.75
CACNA1A-202ENST00000573710 PPM1FP49593 454 aaPredicted RBP19.76■□□□□ 0.75
CACNA1A-202ENST00000573710 NGEFQ8N5V2 710 aa19.76■□□□□ 0.75
CACNA1A-202ENST00000573710 USP35Q9P2H5 1018 aa19.75■□□□□ 0.75
CACNA1A-202ENST00000573710 DHX16O60231 1041 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-202ENST00000573710 ODF2Q5BJF6 829 aa19.75■□□□□ 0.75
CACNA1A-202ENST00000573710 NAP1L1P55209 391 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-202ENST00000573710 DCAF8L1A6NGE4 600 aa19.72■□□□□ 0.75
CACNA1A-202ENST00000573710 CCDC97Q96F63 343 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-202ENST00000573710 GBP4Q96PP9 640 aa19.72■□□□□ 0.75
CACNA1A-202ENST00000573710 MFAP1P55081 439 aaKnown RBP19.72■□□□□ 0.75
CACNA1A-202ENST00000573710 SYAP1Q96A49 352 aaPredicted RBP19.71■□□□□ 0.75
CACNA1A-202ENST00000573710 CT47A1Q5JQC4 288 aaPredicted RBP19.7■□□□□ 0.74
CACNA1A-202ENST00000573710 CCDC43Q96MW1 224 aaKnown RBP19.7■□□□□ 0.74
CACNA1A-202ENST00000573710 SYTL4Q96C24 671 aaPredicted RBP19.7■□□□□ 0.74
CACNA1A-202ENST00000573710 H3BQV1 296 aa19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 AKAP17AQ02040 695 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 IFFO2Q5TF58 517 aa19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 EVA1CP58658 441 aa19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 PPP1R1BQ9UD71 204 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 TPM2P07951 284 aa19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 CCDC70Q6NSX1 233 aa19.69■□□□□ 0.74
CACNA1A-202ENST00000573710 CFDP1Q9UEE9 299 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-202ENST00000573710 SLC4A3P48751 1232 aa19.66■□□□□ 0.74
CACNA1A-202ENST00000573710 MCTP1Q6DN14 999 aa19.66■□□□□ 0.74
CACNA1A-202ENST00000573710 HDGFP51858 240 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms