RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 HFM1A2PYH4 1435 aa17.23■□□□□ 0.35
SPG7-222ENST00000569820 GCC2Q8IWJ2 1684 aa17.22■□□□□ 0.35
SPG7-222ENST00000569820 DNMT1P26358 1616 aaKnown RBP17.19■□□□□ 0.34
SPG7-222ENST00000569820 NAIPQ13075 1403 aa17.19■□□□□ 0.34
SPG7-222ENST00000569820 CDC42BPAQ5VT25 1732 aa17.19■□□□□ 0.34
SPG7-222ENST00000569820 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
SPG7-222ENST00000569820 ABCC2Q92887 1545 aa17.17■□□□□ 0.34
SPG7-222ENST00000569820 GPATCH8Q9UKJ3 1502 aaKnown RBP17.17■□□□□ 0.34
SPG7-222ENST00000569820 AKNAQ7Z591 1439 aa17.17■□□□□ 0.34
SPG7-222ENST00000569820 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
SPG7-222ENST00000569820 CAMSAP2Q08AD1 1489 aa17.14■□□□□ 0.33
SPG7-222ENST00000569820 DAPK1P53355 1430 aa17.14■□□□□ 0.33
SPG7-222ENST00000569820 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
SPG7-222ENST00000569820 PLEKHD1A6NEE1 506 aa17.12■□□□□ 0.33
SPG7-222ENST00000569820 ABCC5O15440 1437 aa17.11■□□□□ 0.33
SPG7-222ENST00000569820 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
SPG7-222ENST00000569820 KDM6BO15054 1643 aa17.1■□□□□ 0.33
SPG7-222ENST00000569820 ADGBQ8N7X0 1667 aa17.09■□□□□ 0.33
SPG7-222ENST00000569820 ZCCHC11Q5TAX3 1644 aaKnown RBP17.08■□□□□ 0.33
SPG7-222ENST00000569820 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.32
SPG7-222ENST00000569820 PREX2Q70Z35 1606 aa17.08■□□□□ 0.32
SPG7-222ENST00000569820 CHIC2Q9UKJ5 165 aa17.08■□□□□ 0.32
SPG7-222ENST00000569820 CFDP1Q9UEE9 299 aaPredicted RBP17.07■□□□□ 0.32
SPG7-222ENST00000569820 ROCK1Q13464 1354 aa17.07■□□□□ 0.32
SPG7-222ENST00000569820 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
SPG7-222ENST00000569820 CDC42BPBQ9Y5S2 1711 aa17.06■□□□□ 0.32
SPG7-222ENST00000569820 TTC37Q6PGP7 1564 aa17.05■□□□□ 0.32
SPG7-222ENST00000569820 KDM5BQ9UGL1 1544 aa17.04■□□□□ 0.32
SPG7-222ENST00000569820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.02■□□□□ 0.32
SPG7-222ENST00000569820 ADGRL2O95490 1459 aa17.01■□□□□ 0.31
SPG7-222ENST00000569820 SAMD9LQ8IVG5 1584 aa17.01■□□□□ 0.31
SPG7-222ENST00000569820 MYO5CQ9NQX4 1742 aa17■□□□□ 0.31
SPG7-222ENST00000569820 ARHGEF5Q12774 1597 aa16.99■□□□□ 0.31
SPG7-222ENST00000569820 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
SPG7-222ENST00000569820 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
SPG7-222ENST00000569820 ZNF777Q9ULD5 760 aaPredicted RBP16.99■□□□□ 0.31
SPG7-222ENST00000569820 SIN3AQ96ST3 1273 aa16.97■□□□□ 0.31
SPG7-222ENST00000569820 NCOA1Q15788 1441 aa16.97■□□□□ 0.31
SPG7-222ENST00000569820 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
SPG7-222ENST00000569820 ARHGAP5Q13017 1502 aa16.93■□□□□ 0.3
SPG7-222ENST00000569820 C9orf84Q5VXU9 1444 aa16.92■□□□□ 0.3
SPG7-222ENST00000569820 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
SPG7-222ENST00000569820 SYCP2Q9BX26 1530 aa16.91■□□□□ 0.3
SPG7-222ENST00000569820 BCANQ96GW7 911 aa16.91■□□□□ 0.3
SPG7-222ENST00000569820 CCDC141Q6ZP82 1450 aa16.9■□□□□ 0.3
SPG7-222ENST00000569820 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
SPG7-222ENST00000569820 TIMELESSQ9UNS1 1208 aa16.9■□□□□ 0.3
SPG7-222ENST00000569820 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
SPG7-222ENST00000569820 MAST1Q9Y2H9 1570 aa16.87■□□□□ 0.29
SPG7-222ENST00000569820 WDR7Q9Y4E6 1490 aa16.87■□□□□ 0.29
SPG7-222ENST00000569820 PLCH2O75038 1416 aa16.86■□□□□ 0.29
SPG7-222ENST00000569820 HNRNPMP52272 730 aaKnown RBP eCLIP16.86■□□□□ 0.29
SPG7-222ENST00000569820 FKBP8Q14318 412 aa16.86■□□□□ 0.29
SPG7-222ENST00000569820 MPHOSPH9Q99550 1183 aa16.86■□□□□ 0.29
SPG7-222ENST00000569820 PZPP20742 1482 aa16.86■□□□□ 0.29
SPG7-222ENST00000569820 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
SPG7-222ENST00000569820 ANKRD50Q9ULJ7 1429 aa16.85■□□□□ 0.29
SPG7-222ENST00000569820 PLEKHH2Q8IVE3 1493 aa16.85■□□□□ 0.29
SPG7-222ENST00000569820 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
SPG7-222ENST00000569820 ARAP3Q8WWN8 1544 aa16.84■□□□□ 0.29
SPG7-222ENST00000569820 KIAA1107Q9UPP5 1409 aa16.84■□□□□ 0.29
SPG7-222ENST00000569820 ABCC1P33527 1531 aa16.83■□□□□ 0.28
SPG7-222ENST00000569820 ABCA9Q8IUA7 1624 aa16.83■□□□□ 0.28
SPG7-222ENST00000569820 TONSLQ96HA7 1378 aa16.83■□□□□ 0.28
SPG7-222ENST00000569820 ARHGEF12Q9NZN5 1544 aa16.82■□□□□ 0.28
SPG7-222ENST00000569820 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
SPG7-222ENST00000569820 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
SPG7-222ENST00000569820 PLXNC1O60486 1568 aa16.81■□□□□ 0.28
SPG7-222ENST00000569820 KIF15Q9NS87 1388 aa16.81■□□□□ 0.28
SPG7-222ENST00000569820 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
SPG7-222ENST00000569820 RSPH4AQ5TD94 716 aa16.8■□□□□ 0.28
SPG7-222ENST00000569820 PPP1R15AO75807 674 aaPredicted RBP16.8■□□□□ 0.28
SPG7-222ENST00000569820 ANKRD30BQ9BXX2 1392 aa16.79■□□□□ 0.28
SPG7-222ENST00000569820 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
SPG7-222ENST00000569820 NEFLP07196 543 aa16.78■□□□□ 0.28
SPG7-222ENST00000569820 FOXD1Q16676 465 aa16.77■□□□□ 0.28
SPG7-222ENST00000569820 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
SPG7-222ENST00000569820 RPRD2Q5VT52 1461 aaKnown RBP16.76■□□□□ 0.27
SPG7-222ENST00000569820 EFCAB2Q5VUJ9 269 aa16.75■□□□□ 0.27
SPG7-222ENST00000569820 UNC13BO14795 1591 aa16.74■□□□□ 0.27
SPG7-222ENST00000569820 TRAPPC8Q9Y2L5 1435 aa16.72■□□□□ 0.27
SPG7-222ENST00000569820 TEX14Q8IWB6 1497 aa16.71■□□□□ 0.27
SPG7-222ENST00000569820 FANCAO15360 1455 aa16.71■□□□□ 0.27
SPG7-222ENST00000569820 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
SPG7-222ENST00000569820 NUP155O75694 1391 aa16.7■□□□□ 0.26
SPG7-222ENST00000569820 ZFYVE16Q7Z3T8 1539 aa16.7■□□□□ 0.26
SPG7-222ENST00000569820 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
SPG7-222ENST00000569820 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
SPG7-222ENST00000569820 FAM135AQ9P2D6 1515 aa16.68■□□□□ 0.26
SPG7-222ENST00000569820 INO80Q9ULG1 1556 aaPredicted RBP16.67■□□□□ 0.26
SPG7-222ENST00000569820 MSH5O43196 834 aa16.67■□□□□ 0.26
SPG7-222ENST00000569820 PKD2Q13563 968 aa16.67■□□□□ 0.26
SPG7-222ENST00000569820 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
SPG7-222ENST00000569820 ERBINQ96RT1 1412 aa16.66■□□□□ 0.26
SPG7-222ENST00000569820 MAGI2Q86UL8 1455 aa16.66■□□□□ 0.26
SPG7-222ENST00000569820 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
SPG7-222ENST00000569820 RTEL1-TNFRSF6BF6WH68 1400 aa16.65■□□□□ 0.26
SPG7-222ENST00000569820 UBE2Q2Q8WVN8 375 aa16.64■□□□□ 0.25
SPG7-222ENST00000569820 ADGRL1O94910 1474 aa16.64■□□□□ 0.25
SPG7-222ENST00000569820 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms