RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 OSCARQ8IYS5 282 aa26.28■■□□□ 1.8
SMPD3-211ENST00000568373 CFDP1Q9UEE9 299 aaPredicted RBP26.26■■□□□ 1.79
SMPD3-211ENST00000568373 CAMSAP2Q08AD1 1489 aa26.26■■□□□ 1.79
SMPD3-211ENST00000568373 KDM6BO15054 1643 aa26.24■■□□□ 1.79
SMPD3-211ENST00000568373 ABCC10Q5T3U5 1492 aa26.22■■□□□ 1.79
SMPD3-211ENST00000568373 CDC42BPAQ5VT25 1732 aa26.2■■□□□ 1.78
SMPD3-211ENST00000568373 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
SMPD3-211ENST00000568373 ERCC6L2Q5T890 1561 aa26.17■■□□□ 1.78
SMPD3-211ENST00000568373 ACIN1Q9UKV3 1341 aaKnown RBP26.16■■□□□ 1.78
SMPD3-211ENST00000568373 CROCC2H7BZ55 1655 aa26.14■■□□□ 1.78
SMPD3-211ENST00000568373 TRIM52Q96A61 297 aa26.14■■□□□ 1.77
SMPD3-211ENST00000568373 DENND4BO75064 1496 aaPredicted RBP26.14■■□□□ 1.77
SMPD3-211ENST00000568373 ADGBQ8N7X0 1667 aa26.13■■□□□ 1.77
SMPD3-211ENST00000568373 PPP1R15AO75807 674 aaPredicted RBP26.12■■□□□ 1.77
SMPD3-211ENST00000568373 ZNF777Q9ULD5 760 aaPredicted RBP26.12■■□□□ 1.77
SMPD3-211ENST00000568373 TONSLQ96HA7 1378 aa26.12■■□□□ 1.77
SMPD3-211ENST00000568373 ABCC2Q92887 1545 aa26.1■■□□□ 1.77
SMPD3-211ENST00000568373 MIER1Q8N108 512 aa26.1■■□□□ 1.77
SMPD3-211ENST00000568373 ADGRL2O95490 1459 aa26.1■■□□□ 1.77
SMPD3-211ENST00000568373 NCOA1Q15788 1441 aa26.08■■□□□ 1.77
SMPD3-211ENST00000568373 MPHOSPH9Q99550 1183 aa26.07■■□□□ 1.76
SMPD3-211ENST00000568373 SHANK2Q9UPX8 1470 aa26.03■■□□□ 1.76
SMPD3-211ENST00000568373 PREX2Q70Z35 1606 aa26.01■■□□□ 1.76
SMPD3-211ENST00000568373 ANKRD30AQ9BXX3 1397 aa26.01■■□□□ 1.75
SMPD3-211ENST00000568373 CDC42BPBQ9Y5S2 1711 aa25.99■■□□□ 1.75
SMPD3-211ENST00000568373 KDM5BQ9UGL1 1544 aa25.98■■□□□ 1.75
SMPD3-211ENST00000568373 ARHGEF5Q12774 1597 aa25.98■■□□□ 1.75
SMPD3-211ENST00000568373 UHRF1BP1LA0JNW5 1464 aa25.97■■□□□ 1.75
SMPD3-211ENST00000568373 C9orf84Q5VXU9 1444 aa25.96■■□□□ 1.75
SMPD3-211ENST00000568373 TTC37Q6PGP7 1564 aa25.95■■□□□ 1.74
SMPD3-211ENST00000568373 SAMD9LQ8IVG5 1584 aa25.95■■□□□ 1.74
SMPD3-211ENST00000568373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.94■■□□□ 1.74
SMPD3-211ENST00000568373 MBD5Q9P267 1494 aa25.93■■□□□ 1.74
SMPD3-211ENST00000568373 ANKRD30BQ9BXX2 1392 aa25.92■■□□□ 1.74
SMPD3-211ENST00000568373 ZCCHC11Q5TAX3 1644 aaKnown RBP25.92■■□□□ 1.74
SMPD3-211ENST00000568373 CENPBP07199 599 aaPredicted RBP25.92■■□□□ 1.74
SMPD3-211ENST00000568373 PZPP20742 1482 aa25.91■■□□□ 1.74
SMPD3-211ENST00000568373 SLC4A1APQ9BWU0 796 aaKnown RBP25.91■■□□□ 1.74
SMPD3-211ENST00000568373 ANKRD50Q9ULJ7 1429 aa25.91■■□□□ 1.74
SMPD3-211ENST00000568373 TSPY4P0CV99 314 aa25.9■■□□□ 1.74
SMPD3-211ENST00000568373 TSPY10P0CW01 314 aa25.9■■□□□ 1.74
SMPD3-211ENST00000568373 FOXD1Q16676 465 aa25.9■■□□□ 1.74
SMPD3-211ENST00000568373 HNRNPMP52272 730 aaKnown RBP eCLIP25.89■■□□□ 1.73
SMPD3-211ENST00000568373 CCDC141Q6ZP82 1450 aa25.88■■□□□ 1.73
SMPD3-211ENST00000568373 MYO5CQ9NQX4 1742 aa25.87■■□□□ 1.73
SMPD3-211ENST00000568373 ARHGAP5Q13017 1502 aa25.87■■□□□ 1.73
SMPD3-211ENST00000568373 RSPH4AQ5TD94 716 aa25.86■■□□□ 1.73
SMPD3-211ENST00000568373 RPRD2Q5VT52 1461 aaKnown RBP25.86■■□□□ 1.73
SMPD3-211ENST00000568373 SYCP2Q9BX26 1530 aa25.82■■□□□ 1.72
SMPD3-211ENST00000568373 KIF15Q9NS87 1388 aa25.82■■□□□ 1.72
SMPD3-211ENST00000568373 KCNH8Q96L42 1107 aa25.79■■□□□ 1.72
SMPD3-211ENST00000568373 PLEKHH2Q8IVE3 1493 aa25.79■■□□□ 1.72
SMPD3-211ENST00000568373 KIAA1107Q9UPP5 1409 aa25.79■■□□□ 1.72
SMPD3-211ENST00000568373 L3MBTL2Q969R5 705 aa25.78■■□□□ 1.72
SMPD3-211ENST00000568373 YTHDC1Q96MU7 727 aaKnown RBP25.78■■□□□ 1.72
SMPD3-211ENST00000568373 MAST1Q9Y2H9 1570 aa25.78■■□□□ 1.72
SMPD3-211ENST00000568373 KDM5DQ9BY66 1539 aa25.77■■□□□ 1.72
SMPD3-211ENST00000568373 TEX14Q8IWB6 1497 aa25.76■■□□□ 1.71
SMPD3-211ENST00000568373 HIRIP3Q9BW71 556 aaPredicted RBP25.76■■□□□ 1.71
SMPD3-211ENST00000568373 PLCH2O75038 1416 aa25.76■■□□□ 1.71
SMPD3-211ENST00000568373 SCAF1Q9H7N4 1312 aaKnown RBP25.74■■□□□ 1.71
SMPD3-211ENST00000568373 NUP155O75694 1391 aa25.73■■□□□ 1.71
SMPD3-211ENST00000568373 DDX10Q13206 875 aaKnown RBP25.72■■□□□ 1.71
SMPD3-211ENST00000568373 PKD2Q13563 968 aa25.72■■□□□ 1.71
SMPD3-211ENST00000568373 CYB5RLQ6IPT4 315 aa25.72■■□□□ 1.71
SMPD3-211ENST00000568373 RIMBP3CA6NJZ7 1639 aa25.71■■□□□ 1.71
SMPD3-211ENST00000568373 RIMBP3BA6NNM3 1639 aa25.71■■□□□ 1.71
SMPD3-211ENST00000568373 RIMBP3Q9UFD9 1639 aa25.71■■□□□ 1.71
SMPD3-211ENST00000568373 PLXNC1O60486 1568 aa25.68■■□□□ 1.7
SMPD3-211ENST00000568373 ARHGEF12Q9NZN5 1544 aa25.68■■□□□ 1.7
SMPD3-211ENST00000568373 EFCAB2Q5VUJ9 269 aa25.67■■□□□ 1.7
SMPD3-211ENST00000568373 WDR7Q9Y4E6 1490 aa25.66■■□□□ 1.7
SMPD3-211ENST00000568373 ARAP3Q8WWN8 1544 aa25.66■■□□□ 1.7
SMPD3-211ENST00000568373 ABCC1P33527 1531 aa25.65■■□□□ 1.7
SMPD3-211ENST00000568373 HSPA5P11021 654 aaKnown RBP25.6■■□□□ 1.69
SMPD3-211ENST00000568373 UNC13BO14795 1591 aa25.6■■□□□ 1.69
SMPD3-211ENST00000568373 FAM135AQ9P2D6 1515 aa25.59■■□□□ 1.69
SMPD3-211ENST00000568373 EIF4G2P78344 907 aaKnown RBP eCLIP25.59■■□□□ 1.69
SMPD3-211ENST00000568373 NBPF8Q3BBV2 869 aa25.59■■□□□ 1.69
SMPD3-211ENST00000568373 DUOX2Q9NRD8 1548 aa25.58■■□□□ 1.69
SMPD3-211ENST00000568373 ABCA9Q8IUA7 1624 aa25.56■■□□□ 1.68
SMPD3-211ENST00000568373 TRAPPC8Q9Y2L5 1435 aa25.55■■□□□ 1.68
SMPD3-211ENST00000568373 ERBINQ96RT1 1412 aa25.53■■□□□ 1.68
SMPD3-211ENST00000568373 DNAJC5Q9H3Z4 198 aa25.53■■□□□ 1.68
SMPD3-211ENST00000568373 ASXL2Q76L83 1435 aa25.52■■□□□ 1.68
SMPD3-211ENST00000568373 IQGAP3Q86VI3 1631 aa25.5■■□□□ 1.67
SMPD3-211ENST00000568373 FANCAO15360 1455 aa25.48■■□□□ 1.67
SMPD3-211ENST00000568373 MAGI2Q86UL8 1455 aa25.48■■□□□ 1.67
SMPD3-211ENST00000568373 WASHC2AQ641Q2 1341 aa25.48■■□□□ 1.67
SMPD3-211ENST00000568373 RTEL1-TNFRSF6BF6WH68 1400 aa25.48■■□□□ 1.67
SMPD3-211ENST00000568373 GTF3C3Q9Y5Q9 886 aa25.48■■□□□ 1.67
SMPD3-211ENST00000568373 SPATA31E1Q6ZUB1 1445 aa25.46■■□□□ 1.67
SMPD3-211ENST00000568373 ANP32CO43423 234 aa25.46■■□□□ 1.67
SMPD3-211ENST00000568373 ZFYVE16Q7Z3T8 1539 aa25.46■■□□□ 1.67
SMPD3-211ENST00000568373 SPAG9O60271 1321 aaKnown RBP25.45■■□□□ 1.66
SMPD3-211ENST00000568373 UHRF1BP1Q6BDS2 1440 aa25.44■■□□□ 1.66
SMPD3-211ENST00000568373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.43■■□□□ 1.66
SMPD3-211ENST00000568373 AFAP1Q8N556 730 aa25.42■■□□□ 1.66
SMPD3-211ENST00000568373 NPM1P06748 294 aaKnown RBP eCLIP25.41■■□□□ 1.66
SMPD3-211ENST00000568373 CCER2I3L3R5 266 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms