RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 MYO5CQ9NQX4 1742 aa18.95■□□□□ 0.62
SPG7-216ENST00000567138 MLECQ14165 292 aa18.92■□□□□ 0.62
SPG7-216ENST00000567138 MAGI2Q86UL8 1455 aa18.92■□□□□ 0.62
SPG7-216ENST00000567138 PREX1Q8TCU6 1659 aa18.91■□□□□ 0.62
SPG7-216ENST00000567138 SCAPERQ9BY12 1400 aa18.89■□□□□ 0.61
SPG7-216ENST00000567138 ARHGEF12Q9NZN5 1544 aa18.88■□□□□ 0.61
SPG7-216ENST00000567138 KIF14Q15058 1648 aa18.87■□□□□ 0.61
SPG7-216ENST00000567138 PLCH2O75038 1416 aa18.87■□□□□ 0.61
SPG7-216ENST00000567138 C9orf84Q5VXU9 1444 aa18.85■□□□□ 0.61
SPG7-216ENST00000567138 LRRIQ1Q96JM4 1722 aa18.84■□□□□ 0.61
SPG7-216ENST00000567138 ATP10AO60312 1499 aa18.84■□□□□ 0.61
SPG7-216ENST00000567138 CERKQ8TCT0 537 aa18.82■□□□□ 0.6
SPG7-216ENST00000567138 STRCQ7RTU9 1775 aa18.82■□□□□ 0.6
SPG7-216ENST00000567138 EHMT2Q96KQ7 1210 aa18.8■□□□□ 0.6
SPG7-216ENST00000567138 ATP1B4Q9UN42 357 aaPredicted RBP18.8■□□□□ 0.6
SPG7-216ENST00000567138 KDM5CP41229 1560 aa18.79■□□□□ 0.6
SPG7-216ENST00000567138 ARHGAP5Q13017 1502 aa18.78■□□□□ 0.6
SPG7-216ENST00000567138 DIP2CQ9Y2E4 1556 aa18.78■□□□□ 0.6
SPG7-216ENST00000567138 CDC42BPBQ9Y5S2 1711 aa18.78■□□□□ 0.6
SPG7-216ENST00000567138 FMN1Q68DA7 1419 aa18.78■□□□□ 0.6
SPG7-216ENST00000567138 ZNF518AQ6AHZ1 1483 aa18.77■□□□□ 0.6
SPG7-216ENST00000567138 ABCA6Q8N139 1617 aa18.77■□□□□ 0.6
SPG7-216ENST00000567138 CEBPAP49715 358 aaPredicted RBP18.77■□□□□ 0.6
SPG7-216ENST00000567138 ARHGAP35Q9NRY4 1499 aa18.76■□□□□ 0.59
SPG7-216ENST00000567138 C3P01024 1663 aa18.76■□□□□ 0.59
SPG7-216ENST00000567138 SETD1BQ9UPS6 1966 aaKnown RBP18.76■□□□□ 0.59
SPG7-216ENST00000567138 EFCAB2Q5VUJ9 269 aa18.76■□□□□ 0.59
SPG7-216ENST00000567138 TROQ12816 1431 aaPredicted RBP18.73■□□□□ 0.59
SPG7-216ENST00000567138 ITSN2Q9NZM3 1697 aa18.73■□□□□ 0.59
SPG7-216ENST00000567138 PREX2Q70Z35 1606 aa18.72■□□□□ 0.59
SPG7-216ENST00000567138 UHRF1BP1Q6BDS2 1440 aa18.72■□□□□ 0.59
SPG7-216ENST00000567138 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
SPG7-216ENST00000567138 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
SPG7-216ENST00000567138 AFAP1Q8N556 730 aa18.7■□□□□ 0.58
SPG7-216ENST00000567138 MYT1LQ9UL68 1186 aa18.7■□□□□ 0.58
SPG7-216ENST00000567138 CLIP1P30622 1438 aa18.7■□□□□ 0.58
SPG7-216ENST00000567138 CDK11AQ9UQ88 783 aaPredicted RBP18.69■□□□□ 0.58
SPG7-216ENST00000567138 ABCC1P33527 1531 aa18.68■□□□□ 0.58
SPG7-216ENST00000567138 CDC42BPAQ5VT25 1732 aa18.67■□□□□ 0.58
SPG7-216ENST00000567138 KIDINS220Q9ULH0 1771 aa18.66■□□□□ 0.58
SPG7-216ENST00000567138 MLH3Q9UHC1 1453 aa18.64■□□□□ 0.58
SPG7-216ENST00000567138 TRAPPC8Q9Y2L5 1435 aa18.63■□□□□ 0.57
SPG7-216ENST00000567138 DISP3Q9P2K9 1392 aa18.63■□□□□ 0.57
SPG7-216ENST00000567138 AGLP35573 1532 aa18.63■□□□□ 0.57
SPG7-216ENST00000567138 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
SPG7-216ENST00000567138 SPATA31D1Q6ZQQ2 1576 aa18.61■□□□□ 0.57
SPG7-216ENST00000567138 PTPRTO14522 1441 aa18.6■□□□□ 0.57
SPG7-216ENST00000567138 CCDC18Q5T9S5 1454 aa18.59■□□□□ 0.57
SPG7-216ENST00000567138 MROH2AA6NES4 1674 aa18.58■□□□□ 0.57
SPG7-216ENST00000567138 ILDR2Q71H61 639 aa18.58■□□□□ 0.57
SPG7-216ENST00000567138 LTBP4Q8N2S1 1624 aa18.58■□□□□ 0.57
SPG7-216ENST00000567138 SUPT6HQ7KZ85 1726 aaKnown RBP18.58■□□□□ 0.56
SPG7-216ENST00000567138 ESF1Q9H501 851 aaKnown RBP18.57■□□□□ 0.56
SPG7-216ENST00000567138 SAMD9LQ8IVG5 1584 aa18.56■□□□□ 0.56
SPG7-216ENST00000567138 NCOA1Q15788 1441 aa18.55■□□□□ 0.56
SPG7-216ENST00000567138 CASKIN1Q8WXD9 1431 aa18.55■□□□□ 0.56
SPG7-216ENST00000567138 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
SPG7-216ENST00000567138 CLTCQ00610 1675 aaKnown RBP18.54■□□□□ 0.56
SPG7-216ENST00000567138 CAMSAP1Q5T5Y3 1602 aa18.54■□□□□ 0.56
SPG7-216ENST00000567138 CNTLNQ9NXG0 1405 aa18.53■□□□□ 0.56
SPG7-216ENST00000567138 MYO3AQ8NEV4 1616 aa18.51■□□□□ 0.55
SPG7-216ENST00000567138 ZNF142P52746 1687 aaPredicted RBP18.51■□□□□ 0.55
SPG7-216ENST00000567138 IQSEC2Q5JU85 1478 aa18.49■□□□□ 0.55
SPG7-216ENST00000567138 FYCO1Q9BQS8 1478 aa18.49■□□□□ 0.55
SPG7-216ENST00000567138 INO80Q9ULG1 1556 aaPredicted RBP18.49■□□□□ 0.55
SPG7-216ENST00000567138 ATP7AQ04656 1500 aa18.48■□□□□ 0.55
SPG7-216ENST00000567138 SOCS7O14512 581 aa18.48■□□□□ 0.55
SPG7-216ENST00000567138 ZNF777Q9ULD5 760 aaPredicted RBP18.48■□□□□ 0.55
SPG7-216ENST00000567138 NPATQ14207 1427 aa18.48■□□□□ 0.55
SPG7-216ENST00000567138 PLXNC1O60486 1568 aa18.47■□□□□ 0.55
SPG7-216ENST00000567138 GPATCH8Q9UKJ3 1502 aaKnown RBP18.44■□□□□ 0.54
SPG7-216ENST00000567138 CEP170BQ9Y4F5 1589 aaPredicted RBP18.44■□□□□ 0.54
SPG7-216ENST00000567138 ZMYM3Q14202 1370 aa18.43■□□□□ 0.54
SPG7-216ENST00000567138 SPAG9O60271 1321 aaKnown RBP18.43■□□□□ 0.54
SPG7-216ENST00000567138 ADGBQ8N7X0 1667 aa18.42■□□□□ 0.54
SPG7-216ENST00000567138 NCKAP5LQ9HCH0 1330 aa18.42■□□□□ 0.54
SPG7-216ENST00000567138 HNRNPMP52272 730 aaKnown RBP eCLIP18.42■□□□□ 0.54
SPG7-216ENST00000567138 A2MP01023 1474 aa18.41■□□□□ 0.54
SPG7-216ENST00000567138 ZNF335Q9H4Z2 1342 aaPredicted RBP18.4■□□□□ 0.54
SPG7-216ENST00000567138 PLA2R1Q13018 1463 aa18.38■□□□□ 0.53
SPG7-216ENST00000567138 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
SPG7-216ENST00000567138 PTPRKQ15262 1439 aa18.38■□□□□ 0.53
SPG7-216ENST00000567138 POLR1AO95602 1720 aaPredicted RBP18.37■□□□□ 0.53
SPG7-216ENST00000567138 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
SPG7-216ENST00000567138 KIAA1107Q9UPP5 1409 aa18.36■□□□□ 0.53
SPG7-216ENST00000567138 CCNB3Q8WWL7 1395 aa18.35■□□□□ 0.53
SPG7-216ENST00000567138 TIAM1Q13009 1591 aa18.35■□□□□ 0.53
SPG7-216ENST00000567138 GGT6Q6P531 493 aa18.34■□□□□ 0.53
SPG7-216ENST00000567138 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
SPG7-216ENST00000567138 DNMT1P26358 1616 aaKnown RBP18.33■□□□□ 0.53
SPG7-216ENST00000567138 UBAP1LF5GYI3 381 aa18.33■□□□□ 0.53
SPG7-216ENST00000567138 PKD2Q13563 968 aa18.31■□□□□ 0.52
SPG7-216ENST00000567138 A2ML1A8K2U0 1454 aa18.3■□□□□ 0.52
SPG7-216ENST00000567138 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
SPG7-216ENST00000567138 NEURL4Q96JN8 1562 aa18.29■□□□□ 0.52
SPG7-216ENST00000567138 EHBP1L1Q8N3D4 1523 aa18.28■□□□□ 0.52
SPG7-216ENST00000567138 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
SPG7-216ENST00000567138 ZNF644Q9H582 1327 aaPredicted RBP18.27■□□□□ 0.52
SPG7-216ENST00000567138 MBD5Q9P267 1494 aa18.26■□□□□ 0.51
SPG7-216ENST00000567138 KDM5DQ9BY66 1539 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms