RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 RANGAP1P46060 587 aaPredicted RBP21.45■■□□□ 1.02
RNF40-208ENST00000565995 ARHGEF12Q9NZN5 1544 aa21.44■■□□□ 1.02
RNF40-208ENST00000565995 SCAPERQ9BY12 1400 aa21.43■■□□□ 1.02
RNF40-208ENST00000565995 ATP10AO60312 1499 aa21.42■■□□□ 1.02
RNF40-208ENST00000565995 HSPA2P54652 639 aa21.41■■□□□ 1.02
RNF40-208ENST00000565995 LRRIQ1Q96JM4 1722 aa21.41■■□□□ 1.02
RNF40-208ENST00000565995 STRCQ7RTU9 1775 aa21.38■■□□□ 1.01
RNF40-208ENST00000565995 C9orf84Q5VXU9 1444 aa21.38■■□□□ 1.01
RNF40-208ENST00000565995 CDC42BPBQ9Y5S2 1711 aa21.37■■□□□ 1.01
RNF40-208ENST00000565995 FMN1Q68DA7 1419 aa21.37■■□□□ 1.01
RNF40-208ENST00000565995 KIF14Q15058 1648 aa21.37■■□□□ 1.01
RNF40-208ENST00000565995 KDM5CP41229 1560 aa21.36■■□□□ 1.01
RNF40-208ENST00000565995 EFCAB2Q5VUJ9 269 aa21.35■■□□□ 1.01
RNF40-208ENST00000565995 REREQ9P2R6 1566 aa21.34■■□□□ 1.01
RNF40-208ENST00000565995 ZNF518AQ6AHZ1 1483 aa21.33■■□□□ 1.01
RNF40-208ENST00000565995 CERKQ8TCT0 537 aa21.33■■□□□ 1.01
RNF40-208ENST00000565995 ARHGAP35Q9NRY4 1499 aa21.32■■□□□ 1
RNF40-208ENST00000565995 MLECQ14165 292 aa21.31■■□□□ 1
RNF40-208ENST00000565995 CDK11AQ9UQ88 783 aaPredicted RBP21.31■■□□□ 1
RNF40-208ENST00000565995 TROQ12816 1431 aaPredicted RBP21.29■■□□□ 1
RNF40-208ENST00000565995 C3P01024 1663 aa21.28■■□□□ 1
RNF40-208ENST00000565995 DIP2CQ9Y2E4 1556 aa21.28■■□□□ 1
RNF40-208ENST00000565995 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
RNF40-208ENST00000565995 ARHGAP5Q13017 1502 aa21.26■□□□□ 0.99
RNF40-208ENST00000565995 PREX2Q70Z35 1606 aa21.25■□□□□ 0.99
RNF40-208ENST00000565995 ABCA6Q8N139 1617 aa21.25■□□□□ 0.99
RNF40-208ENST00000565995 MLH3Q9UHC1 1453 aa21.25■□□□□ 0.99
RNF40-208ENST00000565995 ITSN2Q9NZM3 1697 aa21.24■□□□□ 0.99
RNF40-208ENST00000565995 CDC42BPAQ5VT25 1732 aa21.22■□□□□ 0.99
RNF40-208ENST00000565995 CEBPAP49715 358 aaPredicted RBP21.22■□□□□ 0.99
RNF40-208ENST00000565995 AFAP1Q8N556 730 aa21.22■□□□□ 0.99
RNF40-208ENST00000565995 DMRT2Q9Y5R5 561 aa21.22■□□□□ 0.99
RNF40-208ENST00000565995 AGLP35573 1532 aa21.22■□□□□ 0.99
RNF40-208ENST00000565995 CLIP1P30622 1438 aa21.21■□□□□ 0.99
RNF40-208ENST00000565995 KIDINS220Q9ULH0 1771 aa21.21■□□□□ 0.99
RNF40-208ENST00000565995 UBTFP17480 764 aaKnown RBP21.21■□□□□ 0.99
RNF40-208ENST00000565995 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.98
RNF40-208ENST00000565995 UHRF1BP1Q6BDS2 1440 aa21.19■□□□□ 0.98
RNF40-208ENST00000565995 ABCC1P33527 1531 aa21.19■□□□□ 0.98
RNF40-208ENST00000565995 MROH2AA6NES4 1674 aa21.15■□□□□ 0.98
RNF40-208ENST00000565995 PTPRTO14522 1441 aa21.15■□□□□ 0.98
RNF40-208ENST00000565995 CCDC18Q5T9S5 1454 aa21.13■□□□□ 0.97
RNF40-208ENST00000565995 TRAPPC8Q9Y2L5 1435 aa21.12■□□□□ 0.97
RNF40-208ENST00000565995 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
RNF40-208ENST00000565995 LTBP4Q8N2S1 1624 aa21.09■□□□□ 0.97
RNF40-208ENST00000565995 CNTLNQ9NXG0 1405 aa21.09■□□□□ 0.97
RNF40-208ENST00000565995 SAMD9LQ8IVG5 1584 aa21.07■□□□□ 0.96
RNF40-208ENST00000565995 IQSEC2Q5JU85 1478 aa21.07■□□□□ 0.96
RNF40-208ENST00000565995 MYT1LQ9UL68 1186 aa21.06■□□□□ 0.96
RNF40-208ENST00000565995 SUPT6HQ7KZ85 1726 aaKnown RBP21.05■□□□□ 0.96
RNF40-208ENST00000565995 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
RNF40-208ENST00000565995 NPATQ14207 1427 aa21.04■□□□□ 0.96
RNF40-208ENST00000565995 NCOA1Q15788 1441 aa21.04■□□□□ 0.96
RNF40-208ENST00000565995 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
RNF40-208ENST00000565995 ESF1Q9H501 851 aaKnown RBP21.02■□□□□ 0.96
RNF40-208ENST00000565995 ZNF142P52746 1687 aaPredicted RBP21.02■□□□□ 0.95
RNF40-208ENST00000565995 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
RNF40-208ENST00000565995 CLTCQ00610 1675 aaKnown RBP21■□□□□ 0.95
RNF40-208ENST00000565995 PLXNC1O60486 1568 aa20.99■□□□□ 0.95
RNF40-208ENST00000565995 CAMSAP1Q5T5Y3 1602 aa20.99■□□□□ 0.95
RNF40-208ENST00000565995 GPATCH8Q9UKJ3 1502 aaKnown RBP20.99■□□□□ 0.95
RNF40-208ENST00000565995 INO80Q9ULG1 1556 aaPredicted RBP20.98■□□□□ 0.95
RNF40-208ENST00000565995 DISP3Q9P2K9 1392 aa20.97■□□□□ 0.95
RNF40-208ENST00000565995 SYCP2Q9BX26 1530 aa20.97■□□□□ 0.95
RNF40-208ENST00000565995 ATP7AQ04656 1500 aa20.96■□□□□ 0.95
RNF40-208ENST00000565995 ILDR2Q71H61 639 aa20.96■□□□□ 0.95
RNF40-208ENST00000565995 ZMYM3Q14202 1370 aa20.96■□□□□ 0.95
RNF40-208ENST00000565995 ADGBQ8N7X0 1667 aa20.96■□□□□ 0.95
RNF40-208ENST00000565995 KIAA1107Q9UPP5 1409 aa20.95■□□□□ 0.95
RNF40-208ENST00000565995 SPATA31D1Q6ZQQ2 1576 aa20.94■□□□□ 0.94
RNF40-208ENST00000565995 MYO3AQ8NEV4 1616 aa20.94■□□□□ 0.94
RNF40-208ENST00000565995 SOCS7O14512 581 aa20.93■□□□□ 0.94
RNF40-208ENST00000565995 PLEKHH2Q8IVE3 1493 aa20.93■□□□□ 0.94
RNF40-208ENST00000565995 SPAG9O60271 1321 aaKnown RBP20.92■□□□□ 0.94
RNF40-208ENST00000565995 PLA2R1Q13018 1463 aa20.91■□□□□ 0.94
RNF40-208ENST00000565995 HNRNPMP52272 730 aaKnown RBP eCLIP20.89■□□□□ 0.93
RNF40-208ENST00000565995 CEP170BQ9Y4F5 1589 aaPredicted RBP20.89■□□□□ 0.93
RNF40-208ENST00000565995 A2MP01023 1474 aa20.88■□□□□ 0.93
RNF40-208ENST00000565995 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
RNF40-208ENST00000565995 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
RNF40-208ENST00000565995 PPP6R1Q9UPN7 881 aa20.87■□□□□ 0.93
RNF40-208ENST00000565995 TCOF1Q13428 1488 aaKnown RBP20.87■□□□□ 0.93
RNF40-208ENST00000565995 PKD2Q13563 968 aa20.85■□□□□ 0.93
RNF40-208ENST00000565995 POLR1AO95602 1720 aaPredicted RBP20.84■□□□□ 0.93
RNF40-208ENST00000565995 CFDP1Q9UEE9 299 aaPredicted RBP20.83■□□□□ 0.93
RNF40-208ENST00000565995 NCKAP5LQ9HCH0 1330 aa20.82■□□□□ 0.92
RNF40-208ENST00000565995 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
RNF40-208ENST00000565995 DNMT1P26358 1616 aaKnown RBP20.82■□□□□ 0.92
RNF40-208ENST00000565995 TIAM1Q13009 1591 aa20.8■□□□□ 0.92
RNF40-208ENST00000565995 MBD5Q9P267 1494 aa20.8■□□□□ 0.92
RNF40-208ENST00000565995 ZNF335Q9H4Z2 1342 aaPredicted RBP20.79■□□□□ 0.92
RNF40-208ENST00000565995 RTEL1-TNFRSF6BF6WH68 1400 aa20.79■□□□□ 0.92
RNF40-208ENST00000565995 A2ML1A8K2U0 1454 aa20.78■□□□□ 0.92
RNF40-208ENST00000565995 GGT6Q6P531 493 aa20.76■□□□□ 0.91
RNF40-208ENST00000565995 FAM135AQ9P2D6 1515 aa20.76■□□□□ 0.91
RNF40-208ENST00000565995 MTUS2Q5JR59 1369 aa20.74■□□□□ 0.91
RNF40-208ENST00000565995 EHBP1L1Q8N3D4 1523 aa20.74■□□□□ 0.91
RNF40-208ENST00000565995 DHX29Q7Z478 1369 aaKnown RBP20.73■□□□□ 0.91
RNF40-208ENST00000565995 NEURL4Q96JN8 1562 aa20.72■□□□□ 0.91
RNF40-208ENST00000565995 UBAP1LF5GYI3 381 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms