RNA–Protein interactions for RNA: ENST00000565184.5

PKM-216, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 2,503 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-216ENST00000565184 ROCK1Q13464 1354 aa24.46■■□□□ 1.51
PKM-216ENST00000565184 TIMELESSQ9UNS1 1208 aa24.45■■□□□ 1.51
PKM-216ENST00000565184 CAMSAP2Q08AD1 1489 aa24.45■■□□□ 1.5
PKM-216ENST00000565184 ERCC6L2Q5T890 1561 aa24.44■■□□□ 1.5
PKM-216ENST00000565184 ABCC10Q5T3U5 1492 aa24.43■■□□□ 1.5
PKM-216ENST00000565184 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
PKM-216ENST00000565184 ZNF777Q9ULD5 760 aaPredicted RBP24.4■■□□□ 1.5
PKM-216ENST00000565184 TRIM52Q96A61 297 aa24.38■■□□□ 1.49
PKM-216ENST00000565184 DENND4BO75064 1496 aaPredicted RBP24.36■■□□□ 1.49
PKM-216ENST00000565184 CDC42BPAQ5VT25 1732 aa24.36■■□□□ 1.49
PKM-216ENST00000565184 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
PKM-216ENST00000565184 MIER1Q8N108 512 aa24.33■■□□□ 1.49
PKM-216ENST00000565184 MPHOSPH9Q99550 1183 aa24.31■■□□□ 1.48
PKM-216ENST00000565184 ABCC2Q92887 1545 aa24.3■■□□□ 1.48
PKM-216ENST00000565184 TONSLQ96HA7 1378 aa24.3■■□□□ 1.48
PKM-216ENST00000565184 NCOA1Q15788 1441 aa24.29■■□□□ 1.48
PKM-216ENST00000565184 CROCC2H7BZ55 1655 aa24.28■■□□□ 1.48
PKM-216ENST00000565184 ADGRL2O95490 1459 aa24.27■■□□□ 1.48
PKM-216ENST00000565184 ACIN1Q9UKV3 1341 aaKnown RBP24.27■■□□□ 1.48
PKM-216ENST00000565184 ADGBQ8N7X0 1667 aa24.27■■□□□ 1.47
PKM-216ENST00000565184 ANKRD30AQ9BXX3 1397 aa24.22■■□□□ 1.47
PKM-216ENST00000565184 FOXD1Q16676 465 aa24.2■■□□□ 1.46
PKM-216ENST00000565184 KDM5BQ9UGL1 1544 aa24.19■■□□□ 1.46
PKM-216ENST00000565184 UHRF1BP1LA0JNW5 1464 aa24.19■■□□□ 1.46
PKM-216ENST00000565184 SHANK2Q9UPX8 1470 aa24.19■■□□□ 1.46
PKM-216ENST00000565184 PREX2Q70Z35 1606 aa24.19■■□□□ 1.46
PKM-216ENST00000565184 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.46
PKM-216ENST00000565184 CDC42BPBQ9Y5S2 1711 aa24.18■■□□□ 1.46
PKM-216ENST00000565184 C9orf84Q5VXU9 1444 aa24.17■■□□□ 1.46
PKM-216ENST00000565184 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.17■■□□□ 1.461e-7■■□□□ 11.8
PKM-216ENST00000565184 MBD5Q9P267 1494 aa24.17■■□□□ 1.46
PKM-216ENST00000565184 TTC37Q6PGP7 1564 aa24.17■■□□□ 1.46
PKM-216ENST00000565184 SAMD9LQ8IVG5 1584 aa24.16■■□□□ 1.46
PKM-216ENST00000565184 ARHGEF5Q12774 1597 aa24.15■■□□□ 1.46
PKM-216ENST00000565184 SLC4A1APQ9BWU0 796 aaKnown RBP24.15■■□□□ 1.46
PKM-216ENST00000565184 PZPP20742 1482 aa24.14■■□□□ 1.46
PKM-216ENST00000565184 ANKRD30BQ9BXX2 1392 aa24.14■■□□□ 1.46
PKM-216ENST00000565184 TSPY4P0CV99 314 aa24.14■■□□□ 1.45
PKM-216ENST00000565184 TSPY10P0CW01 314 aa24.14■■□□□ 1.45
PKM-216ENST00000565184 ZCCHC11Q5TAX3 1644 aaKnown RBP24.14■■□□□ 1.45
PKM-216ENST00000565184 ANKRD50Q9ULJ7 1429 aa24.12■■□□□ 1.45
PKM-216ENST00000565184 KCNH8Q96L42 1107 aa24.12■■□□□ 1.45
PKM-216ENST00000565184 ARHGAP5Q13017 1502 aa24.09■■□□□ 1.45
PKM-216ENST00000565184 CCDC141Q6ZP82 1450 aa24.09■■□□□ 1.45
PKM-216ENST00000565184 RSPH4AQ5TD94 716 aa24.07■■□□□ 1.44
PKM-216ENST00000565184 HIRIP3Q9BW71 556 aaPredicted RBP24.06■■□□□ 1.44
PKM-216ENST00000565184 RPRD2Q5VT52 1461 aaKnown RBP24.05■■□□□ 1.44
PKM-216ENST00000565184 CENPBP07199 599 aaPredicted RBP24.05■■□□□ 1.44
PKM-216ENST00000565184 KIF15Q9NS87 1388 aa24.04■■□□□ 1.44
PKM-216ENST00000565184 MYO5CQ9NQX4 1742 aa24.04■■□□□ 1.44
PKM-216ENST00000565184 SYCP2Q9BX26 1530 aa24.04■■□□□ 1.44
PKM-216ENST00000565184 L3MBTL2Q969R5 705 aa24.04■■□□□ 1.44
PKM-216ENST00000565184 YTHDC1Q96MU7 727 aaKnown RBP24.02■■□□□ 1.44
PKM-216ENST00000565184 PLCH2O75038 1416 aa24.01■■□□□ 1.43
PKM-216ENST00000565184 KIAA1107Q9UPP5 1409 aa24.01■■□□□ 1.43
PKM-216ENST00000565184 PKD2Q13563 968 aa23.99■■□□□ 1.43
PKM-216ENST00000565184 NUP155O75694 1391 aa23.98■■□□□ 1.43
PKM-216ENST00000565184 PLEKHH2Q8IVE3 1493 aa23.98■■□□□ 1.43
PKM-216ENST00000565184 DDX10Q13206 875 aaKnown RBP23.98■■□□□ 1.43
PKM-216ENST00000565184 MAST1Q9Y2H9 1570 aa23.97■■□□□ 1.43
PKM-216ENST00000565184 OSCARQ8IYS5 282 aa23.97■■□□□ 1.43
PKM-216ENST00000565184 TEX14Q8IWB6 1497 aa23.96■■□□□ 1.43
PKM-216ENST00000565184 ARHGEF12Q9NZN5 1544 aa23.96■■□□□ 1.43
PKM-216ENST00000565184 SCAF1Q9H7N4 1312 aaKnown RBP23.95■■□□□ 1.43
PKM-216ENST00000565184 KDM5DQ9BY66 1539 aa23.95■■□□□ 1.43
PKM-216ENST00000565184 EFCAB2Q5VUJ9 269 aa23.94■■□□□ 1.42
PKM-216ENST00000565184 WDR7Q9Y4E6 1490 aa23.9■■□□□ 1.42
PKM-216ENST00000565184 NBPF8Q3BBV2 869 aa23.89■■□□□ 1.42
PKM-216ENST00000565184 HSPA5P11021 654 aaKnown RBP23.87■■□□□ 1.41
PKM-216ENST00000565184 ABCC1P33527 1531 aa23.87■■□□□ 1.41
PKM-216ENST00000565184 PLXNC1O60486 1568 aa23.87■■□□□ 1.41
PKM-216ENST00000565184 ARAP3Q8WWN8 1544 aa23.84■■□□□ 1.41
PKM-216ENST00000565184 TRAPPC8Q9Y2L5 1435 aa23.84■■□□□ 1.41
PKM-216ENST00000565184 EIF4G2P78344 907 aaKnown RBP eCLIP23.82■■□□□ 1.4
PKM-216ENST00000565184 FAM135AQ9P2D6 1515 aa23.82■■□□□ 1.4
PKM-216ENST00000565184 ASXL2Q76L83 1435 aa23.81■■□□□ 1.4
PKM-216ENST00000565184 UNC13BO14795 1591 aa23.8■■□□□ 1.4
PKM-216ENST00000565184 DUOX2Q9NRD8 1548 aa23.8■■□□□ 1.4
PKM-216ENST00000565184 ABCA9Q8IUA7 1624 aa23.78■■□□□ 1.4
PKM-216ENST00000565184 AFAP1Q8N556 730 aa23.75■■□□□ 1.39
PKM-216ENST00000565184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.75■■□□□ 1.393e-16■□□□□ 9.7
PKM-216ENST00000565184 ERBINQ96RT1 1412 aa23.75■■□□□ 1.39
PKM-216ENST00000565184 WASHC2AQ641Q2 1341 aa23.74■■□□□ 1.39
PKM-216ENST00000565184 FANCAO15360 1455 aa23.74■■□□□ 1.39
PKM-216ENST00000565184 SPAG9O60271 1321 aaKnown RBP23.73■■□□□ 1.39
PKM-216ENST00000565184 RTEL1-TNFRSF6BF6WH68 1400 aa23.71■■□□□ 1.39
PKM-216ENST00000565184 NPM1P06748 294 aaKnown RBP eCLIP23.71■■□□□ 1.39
PKM-216ENST00000565184 GTF3C3Q9Y5Q9 886 aa23.7■■□□□ 1.38
PKM-216ENST00000565184 IQGAP3Q86VI3 1631 aa23.7■■□□□ 1.38
PKM-216ENST00000565184 SPATA31E1Q6ZUB1 1445 aa23.7■■□□□ 1.38
PKM-216ENST00000565184 MAGI2Q86UL8 1455 aa23.69■■□□□ 1.38
PKM-216ENST00000565184 ZFYVE16Q7Z3T8 1539 aa23.68■■□□□ 1.38
PKM-216ENST00000565184 ANP32CO43423 234 aa23.68■■□□□ 1.38
PKM-216ENST00000565184 UHRF1BP1Q6BDS2 1440 aa23.67■■□□□ 1.38
PKM-216ENST00000565184 C11orf95C9JLR9 678 aaPredicted RBP23.67■■□□□ 1.38
PKM-216ENST00000565184 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
PKM-216ENST00000565184 PLA2R1Q13018 1463 aa23.67■■□□□ 1.38
PKM-216ENST00000565184 PELP1Q8IZL8 1130 aaKnown RBP23.65■■□□□ 1.38
PKM-216ENST00000565184 ADGRL1O94910 1474 aa23.65■■□□□ 1.38
PKM-216ENST00000565184 SCAPERQ9BY12 1400 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms