RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 GTF3C3Q9Y5Q9 886 aa14.23□□□□□ -0.13
PDXDC1-210ENST00000563679 GPATCH8Q9UKJ3 1502 aaKnown RBP14.23□□□□□ -0.13
PDXDC1-210ENST00000563679 TONSLQ96HA7 1378 aa14.23□□□□□ -0.13
PDXDC1-210ENST00000563679 CAMSAP2Q08AD1 1489 aa14.23□□□□□ -0.13
PDXDC1-210ENST00000563679 PRG4Q92954 1404 aaPredicted RBP14.22□□□□□ -0.13
PDXDC1-210ENST00000563679 SHROOM2Q13796 1616 aa14.21□□□□□ -0.13
PDXDC1-210ENST00000563679 ABCC10Q5T3U5 1492 aa14.21□□□□□ -0.13
PDXDC1-210ENST00000563679 CDC42BPAQ5VT25 1732 aa14.21□□□□□ -0.14
PDXDC1-210ENST00000563679 JPH4Q96JJ6 628 aa14.21□□□□□ -0.14
PDXDC1-210ENST00000563679 RRP7BPQ9NSQ0 103 aa14.18□□□□□ -0.14
PDXDC1-210ENST00000563679 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
PDXDC1-210ENST00000563679 ATP10BO94823 1461 aa14.17□□□□□ -0.14
PDXDC1-210ENST00000563679 CHD1O14646 1710 aa14.17□□□□□ -0.14
PDXDC1-210ENST00000563679 YTHDC1Q96MU7 727 aaKnown RBP14.16□□□□□ -0.14
PDXDC1-210ENST00000563679 NCOA1Q15788 1441 aa14.15□□□□□ -0.14
PDXDC1-210ENST00000563679 RPRD2Q5VT52 1461 aaKnown RBP14.15□□□□□ -0.14
PDXDC1-210ENST00000563679 ANKRD30BQ9BXX2 1392 aa14.15□□□□□ -0.14
PDXDC1-210ENST00000563679 MPHOSPH9Q99550 1183 aa14.14□□□□□ -0.15
PDXDC1-210ENST00000563679 CHIC2Q9UKJ5 165 aa14.14□□□□□ -0.15
PDXDC1-210ENST00000563679 ARHGEF5Q12774 1597 aa14.14□□□□□ -0.15
PDXDC1-210ENST00000563679 PZPP20742 1482 aa14.13□□□□□ -0.15
PDXDC1-210ENST00000563679 TEX14Q8IWB6 1497 aa14.13□□□□□ -0.15
PDXDC1-210ENST00000563679 ZNF644Q9H582 1327 aaPredicted RBP14.12□□□□□ -0.15
PDXDC1-210ENST00000563679 KDM5DQ9BY66 1539 aa14.11□□□□□ -0.15
PDXDC1-210ENST00000563679 ARID3CA6NKF2 412 aa14.11□□□□□ -0.15
PDXDC1-210ENST00000563679 PREX2Q70Z35 1606 aa14.1□□□□□ -0.15
PDXDC1-210ENST00000563679 CFDP1Q9UEE9 299 aaPredicted RBP14.09□□□□□ -0.15
PDXDC1-210ENST00000563679 FBLN2P98095 1184 aa14.08□□□□□ -0.16
PDXDC1-210ENST00000563679 CCER2I3L3R5 266 aa14.07□□□□□ -0.16
PDXDC1-210ENST00000563679 POLR1AO95602 1720 aaPredicted RBP14.07□□□□□ -0.16
PDXDC1-210ENST00000563679 MBD5Q9P267 1494 aa14.07□□□□□ -0.16
PDXDC1-210ENST00000563679 PTPRGP23470 1445 aa14.07□□□□□ -0.16
PDXDC1-210ENST00000563679 CDC42BPBQ9Y5S2 1711 aa14.07□□□□□ -0.16
PDXDC1-210ENST00000563679 TRIM52Q96A61 297 aa14.07□□□□□ -0.16
PDXDC1-210ENST00000563679 ANKRD30AQ9BXX3 1397 aa14.06□□□□□ -0.16
PDXDC1-210ENST00000563679 DDX10Q13206 875 aaKnown RBP14.06□□□□□ -0.16
PDXDC1-210ENST00000563679 PLEKHD1A6NEE1 506 aa14.05□□□□□ -0.16
PDXDC1-210ENST00000563679 MAST1Q9Y2H9 1570 aa14.05□□□□□ -0.16
PDXDC1-210ENST00000563679 KIAA1107Q9UPP5 1409 aa14.04□□□□□ -0.16
PDXDC1-210ENST00000563679 SAMD9LQ8IVG5 1584 aa14.04□□□□□ -0.16
PDXDC1-210ENST00000563679 CLASP1Q7Z460 1538 aa14.04□□□□□ -0.16
PDXDC1-210ENST00000563679 C9orf84Q5VXU9 1444 aa14.03□□□□□ -0.16
PDXDC1-210ENST00000563679 ABCC2Q92887 1545 aa14.03□□□□□ -0.16
PDXDC1-210ENST00000563679 ANKRD50Q9ULJ7 1429 aa14.02□□□□□ -0.17
PDXDC1-210ENST00000563679 L3MBTL2Q969R5 705 aa14.01□□□□□ -0.17
PDXDC1-210ENST00000563679 SPATA31E1Q6ZUB1 1445 aa14□□□□□ -0.17
PDXDC1-210ENST00000563679 CCDC141Q6ZP82 1450 aa14□□□□□ -0.17
PDXDC1-210ENST00000563679 UHRF1BP1LA0JNW5 1464 aa13.99□□□□□ -0.17
PDXDC1-210ENST00000563679 TTC37Q6PGP7 1564 aa13.99□□□□□ -0.17
PDXDC1-210ENST00000563679 SLC4A1APQ9BWU0 796 aaKnown RBP13.98□□□□□ -0.17
PDXDC1-210ENST00000563679 PLXNC1O60486 1568 aa13.98□□□□□ -0.17
PDXDC1-210ENST00000563679 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.98□□□□□ -0.172e-7■■■■■ 47.7
PDXDC1-210ENST00000563679 ARHGEF12Q9NZN5 1544 aa13.98□□□□□ -0.17
PDXDC1-210ENST00000563679 MYO5CQ9NQX4 1742 aa13.98□□□□□ -0.17
PDXDC1-210ENST00000563679 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
PDXDC1-210ENST00000563679 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
PDXDC1-210ENST00000563679 ERCC6L2Q5T890 1561 aa13.97□□□□□ -0.17
PDXDC1-210ENST00000563679 UNC13BO14795 1591 aa13.97□□□□□ -0.17
PDXDC1-210ENST00000563679 ANP32CO43423 234 aa13.96□□□□□ -0.17
PDXDC1-210ENST00000563679 HIRIP3Q9BW71 556 aaPredicted RBP13.96□□□□□ -0.17
PDXDC1-210ENST00000563679 UHRF1BP1Q6BDS2 1440 aa13.96□□□□□ -0.17
PDXDC1-210ENST00000563679 WASHC2AQ641Q2 1341 aa13.96□□□□□ -0.17
PDXDC1-210ENST00000563679 EIF4G2P78344 907 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDXDC1-210ENST00000563679 FOXD1Q16676 465 aa13.95□□□□□ -0.18
PDXDC1-210ENST00000563679 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
PDXDC1-210ENST00000563679 PLEKHH2Q8IVE3 1493 aa13.95□□□□□ -0.18
PDXDC1-210ENST00000563679 CNTLNQ9NXG0 1405 aa13.95□□□□□ -0.18
PDXDC1-210ENST00000563679 NBPF8Q3BBV2 869 aa13.94□□□□□ -0.18
PDXDC1-210ENST00000563679 ZCCHC11Q5TAX3 1644 aaKnown RBP13.93□□□□□ -0.18
PDXDC1-210ENST00000563679 KIF15Q9NS87 1388 aa13.93□□□□□ -0.18
PDXDC1-210ENST00000563679 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
PDXDC1-210ENST00000563679 CCDC7Q96M83 1385 aa13.92□□□□□ -0.18
PDXDC1-210ENST00000563679 SYCP2Q9BX26 1530 aa13.92□□□□□ -0.18
PDXDC1-210ENST00000563679 ARAP3Q8WWN8 1544 aa13.91□□□□□ -0.18
PDXDC1-210ENST00000563679 KDM5CP41229 1560 aa13.91□□□□□ -0.18
PDXDC1-210ENST00000563679 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
PDXDC1-210ENST00000563679 MAGI2Q86UL8 1455 aa13.9□□□□□ -0.18
PDXDC1-210ENST00000563679 IQGAP3Q86VI3 1631 aa13.9□□□□□ -0.18
PDXDC1-210ENST00000563679 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.19
PDXDC1-210ENST00000563679 ARHGAP5Q13017 1502 aa13.89□□□□□ -0.19
PDXDC1-210ENST00000563679 TSPY4P0CV99 314 aa13.89□□□□□ -0.19
PDXDC1-210ENST00000563679 TSPY10P0CW01 314 aa13.89□□□□□ -0.19
PDXDC1-210ENST00000563679 PKD2Q13563 968 aa13.89□□□□□ -0.19
PDXDC1-210ENST00000563679 NUP155O75694 1391 aa13.88□□□□□ -0.19
PDXDC1-210ENST00000563679 SUPT16HQ9Y5B9 1047 aaKnown RBP13.87□□□□□ -0.19
PDXDC1-210ENST00000563679 ABCC1P33527 1531 aa13.86□□□□□ -0.19
PDXDC1-210ENST00000563679 PLCH2O75038 1416 aa13.86□□□□□ -0.19
PDXDC1-210ENST00000563679 DUOX2Q9NRD8 1548 aa13.86□□□□□ -0.19
PDXDC1-210ENST00000563679 BCORL1Q5H9F3 1711 aa13.86□□□□□ -0.19
PDXDC1-210ENST00000563679 HNRNPMP52272 730 aaKnown RBP eCLIP13.86□□□□□ -0.19
PDXDC1-210ENST00000563679 ARID4BQ4LE39 1312 aaPredicted RBP13.85□□□□□ -0.19
PDXDC1-210ENST00000563679 ATP10AO60312 1499 aa13.84□□□□□ -0.19
PDXDC1-210ENST00000563679 C11orf95C9JLR9 678 aaPredicted RBP13.84□□□□□ -0.19
PDXDC1-210ENST00000563679 ERBINQ96RT1 1412 aa13.84□□□□□ -0.19
PDXDC1-210ENST00000563679 LAMC1P11047 1609 aa13.83□□□□□ -0.2
PDXDC1-210ENST00000563679 KIF7Q2M1P5 1343 aa13.82□□□□□ -0.2
PDXDC1-210ENST00000563679 USP47Q96K76 1375 aa13.81□□□□□ -0.2
PDXDC1-210ENST00000563679 TRPM1Q7Z4N2 1603 aa13.8□□□□□ -0.2
PDXDC1-210ENST00000563679 PLA2R1Q13018 1463 aa13.8□□□□□ -0.2
PDXDC1-210ENST00000563679 ABCA9Q8IUA7 1624 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms