RNA–Protein interactions for RNA: ENST00000563563.2

KIAA0040-204, Transcript of KIAA0040, humanhuman

TSL 5

Gene KIAA0040, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA0040-204ENST00000563563 SCAPERQ9BY12 1400 aa29.73■■■□□ 2.35
KIAA0040-204ENST00000563563 CDK13Q14004 1512 aaKnown RBP29.71■■■□□ 2.35
KIAA0040-204ENST00000563563 CERKQ8TCT0 537 aa29.71■■■□□ 2.35
KIAA0040-204ENST00000563563 MLECQ14165 292 aa29.7■■■□□ 2.35
KIAA0040-204ENST00000563563 ARHGEF12Q9NZN5 1544 aa29.68■■■□□ 2.34
KIAA0040-204ENST00000563563 ATP10AO60312 1499 aa29.68■■■□□ 2.34
KIAA0040-204ENST00000563563 C9orf84Q5VXU9 1444 aa29.64■■■□□ 2.34
KIAA0040-204ENST00000563563 EFCAB2Q5VUJ9 269 aa29.62■■■□□ 2.33
KIAA0040-204ENST00000563563 PREX1Q8TCU6 1659 aa29.62■■■□□ 2.33
KIAA0040-204ENST00000563563 MYO5CQ9NQX4 1742 aa29.62■■■□□ 2.33
KIAA0040-204ENST00000563563 FMN1Q68DA7 1419 aa29.56■■■□□ 2.32
KIAA0040-204ENST00000563563 CDK11AQ9UQ88 783 aaPredicted RBP29.55■■■□□ 2.32
KIAA0040-204ENST00000563563 ZNF518AQ6AHZ1 1483 aa29.54■■■□□ 2.32
KIAA0040-204ENST00000563563 SETD1BQ9UPS6 1966 aaKnown RBP29.53■■■□□ 2.32
KIAA0040-204ENST00000563563 CEBPAP49715 358 aaPredicted RBP29.52■■■□□ 2.32
KIAA0040-204ENST00000563563 KDM5CP41229 1560 aa29.52■■■□□ 2.32
KIAA0040-204ENST00000563563 DMRT2Q9Y5R5 561 aa29.51■■■□□ 2.31
KIAA0040-204ENST00000563563 KIF14Q15058 1648 aa29.5■■■□□ 2.31
KIAA0040-204ENST00000563563 STRCQ7RTU9 1775 aa29.5■■■□□ 2.31
KIAA0040-204ENST00000563563 ATP1B4Q9UN42 357 aaPredicted RBP29.49■■■□□ 2.31
KIAA0040-204ENST00000563563 TROQ12816 1431 aaPredicted RBP29.47■■■□□ 2.31
KIAA0040-204ENST00000563563 ARHGAP35Q9NRY4 1499 aa29.47■■■□□ 2.31
KIAA0040-204ENST00000563563 AFAP1Q8N556 730 aa29.46■■■□□ 2.31
KIAA0040-204ENST00000563563 REREQ9P2R6 1566 aa29.46■■■□□ 2.31
KIAA0040-204ENST00000563563 UHRF1BP1Q6BDS2 1440 aa29.45■■■□□ 2.31
KIAA0040-204ENST00000563563 ARHGAP5Q13017 1502 aa29.45■■■□□ 2.31
KIAA0040-204ENST00000563563 DIP2CQ9Y2E4 1556 aa29.43■■■□□ 2.3
KIAA0040-204ENST00000563563 UBTFP17480 764 aaKnown RBP29.42■■■□□ 2.3
KIAA0040-204ENST00000563563 CLIP1P30622 1438 aa29.4■■■□□ 2.3
KIAA0040-204ENST00000563563 MLH3Q9UHC1 1453 aa29.4■■■□□ 2.3
KIAA0040-204ENST00000563563 CDC42BPBQ9Y5S2 1711 aa29.39■■■□□ 2.3
KIAA0040-204ENST00000563563 C3P01024 1663 aa29.37■■■□□ 2.29
KIAA0040-204ENST00000563563 LRRIQ1Q96JM4 1722 aa29.37■■■□□ 2.29
KIAA0040-204ENST00000563563 AGLP35573 1532 aa29.36■■■□□ 2.29
KIAA0040-204ENST00000563563 ABCA6Q8N139 1617 aa29.36■■■□□ 2.29
KIAA0040-204ENST00000563563 MYT1LQ9UL68 1186 aa29.36■■■□□ 2.29
KIAA0040-204ENST00000563563 PTPRTO14522 1441 aa29.36■■■□□ 2.29
KIAA0040-204ENST00000563563 DISP3Q9P2K9 1392 aa29.3■■■□□ 2.28
KIAA0040-204ENST00000563563 PREX2Q70Z35 1606 aa29.3■■■□□ 2.28
KIAA0040-204ENST00000563563 EHMT2Q96KQ7 1210 aa29.29■■■□□ 2.28
KIAA0040-204ENST00000563563 ABCC1P33527 1531 aa29.29■■■□□ 2.28
KIAA0040-204ENST00000563563 TRAPPC8Q9Y2L5 1435 aa29.28■■■□□ 2.28
KIAA0040-204ENST00000563563 ILDR2Q71H61 639 aa29.27■■■□□ 2.28
KIAA0040-204ENST00000563563 ESF1Q9H501 851 aaKnown RBP29.27■■■□□ 2.28
KIAA0040-204ENST00000563563 ITSN2Q9NZM3 1697 aa29.27■■■□□ 2.28
KIAA0040-204ENST00000563563 KIDINS220Q9ULH0 1771 aa29.24■■■□□ 2.27
KIAA0040-204ENST00000563563 CNTLNQ9NXG0 1405 aa29.23■■■□□ 2.27
KIAA0040-204ENST00000563563 LTBP4Q8N2S1 1624 aa29.23■■■□□ 2.27
KIAA0040-204ENST00000563563 SOCS7O14512 581 aa29.21■■■□□ 2.27
KIAA0040-204ENST00000563563 IQSEC2Q5JU85 1478 aa29.21■■■□□ 2.27
KIAA0040-204ENST00000563563 CCDC18Q5T9S5 1454 aa29.21■■■□□ 2.27
KIAA0040-204ENST00000563563 NCOA1Q15788 1441 aa29.2■■■□□ 2.26
KIAA0040-204ENST00000563563 CASKIN1Q8WXD9 1431 aa29.19■■■□□ 2.26
KIAA0040-204ENST00000563563 CDC42BPAQ5VT25 1732 aa29.18■■■□□ 2.26
KIAA0040-204ENST00000563563 MROH2AA6NES4 1674 aa29.15■■■□□ 2.26
KIAA0040-204ENST00000563563 NPATQ14207 1427 aa29.14■■■□□ 2.26
KIAA0040-204ENST00000563563 SPATA31D1Q6ZQQ2 1576 aa29.12■■■□□ 2.25
KIAA0040-204ENST00000563563 SAMD9LQ8IVG5 1584 aa29.12■■■□□ 2.25
KIAA0040-204ENST00000563563 CAMSAP1Q5T5Y3 1602 aa29.09■■■□□ 2.25
KIAA0040-204ENST00000563563 ZMYM3Q14202 1370 aa29.09■■■□□ 2.25
KIAA0040-204ENST00000563563 SPAG9O60271 1321 aaKnown RBP29.03■■■□□ 2.24
KIAA0040-204ENST00000563563 SYCP2Q9BX26 1530 aa29.03■■■□□ 2.24
KIAA0040-204ENST00000563563 GPATCH8Q9UKJ3 1502 aaKnown RBP29.03■■■□□ 2.24
KIAA0040-204ENST00000563563 FYCO1Q9BQS8 1478 aa29.03■■■□□ 2.24
KIAA0040-204ENST00000563563 SUPT6HQ7KZ85 1726 aaKnown RBP29.03■■■□□ 2.24
KIAA0040-204ENST00000563563 ZNF777Q9ULD5 760 aaPredicted RBP29.02■■■□□ 2.24
KIAA0040-204ENST00000563563 KIAA1107Q9UPP5 1409 aa28.99■■■□□ 2.23
KIAA0040-204ENST00000563563 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
KIAA0040-204ENST00000563563 ZNF142P52746 1687 aaPredicted RBP28.99■■■□□ 2.23
KIAA0040-204ENST00000563563 PLA2R1Q13018 1463 aa28.98■■■□□ 2.23
KIAA0040-204ENST00000563563 PLXNC1O60486 1568 aa28.98■■■□□ 2.23
KIAA0040-204ENST00000563563 HNRNPMP52272 730 aaKnown RBP eCLIP28.98■■■□□ 2.23
KIAA0040-204ENST00000563563 CLTCQ00610 1675 aaKnown RBP28.98■■■□□ 2.23
KIAA0040-204ENST00000563563 NCKAP5LQ9HCH0 1330 aa28.97■■■□□ 2.23
KIAA0040-204ENST00000563563 PKD2Q13563 968 aa28.96■■■□□ 2.23
KIAA0040-204ENST00000563563 PLEKHH2Q8IVE3 1493 aa28.96■■■□□ 2.23
KIAA0040-204ENST00000563563 INO80Q9ULG1 1556 aaPredicted RBP28.96■■■□□ 2.23
KIAA0040-204ENST00000563563 MYO3AQ8NEV4 1616 aa28.95■■■□□ 2.23
KIAA0040-204ENST00000563563 A2MP01023 1474 aa28.95■■■□□ 2.22
KIAA0040-204ENST00000563563 PTPRKQ15262 1439 aa28.94■■■□□ 2.22
KIAA0040-204ENST00000563563 ZNF335Q9H4Z2 1342 aaPredicted RBP28.94■■■□□ 2.22
KIAA0040-204ENST00000563563 TCOF1Q13428 1488 aaKnown RBP28.92■■■□□ 2.22
KIAA0040-204ENST00000563563 CEP170BQ9Y4F5 1589 aaPredicted RBP28.92■■■□□ 2.22
KIAA0040-204ENST00000563563 PPP6R1Q9UPN7 881 aa28.91■■■□□ 2.22
KIAA0040-204ENST00000563563 CFDP1Q9UEE9 299 aaPredicted RBP28.9■■■□□ 2.22
KIAA0040-204ENST00000563563 UBAP1LF5GYI3 381 aa28.88■■■□□ 2.21
KIAA0040-204ENST00000563563 GGT6Q6P531 493 aa28.87■■■□□ 2.21
KIAA0040-204ENST00000563563 ADGBQ8N7X0 1667 aa28.85■■■□□ 2.21
KIAA0040-204ENST00000563563 CCNB3Q8WWL7 1395 aa28.85■■■□□ 2.21
KIAA0040-204ENST00000563563 A2ML1A8K2U0 1454 aa28.79■■■□□ 2.2
KIAA0040-204ENST00000563563 DNMT1P26358 1616 aaKnown RBP28.78■■■□□ 2.2
KIAA0040-204ENST00000563563 MBD5Q9P267 1494 aa28.76■■■□□ 2.19
KIAA0040-204ENST00000563563 RTEL1-TNFRSF6BF6WH68 1400 aa28.76■■■□□ 2.19
KIAA0040-204ENST00000563563 MTUS2Q5JR59 1369 aa28.75■■■□□ 2.19
KIAA0040-204ENST00000563563 DHX29Q7Z478 1369 aaKnown RBP28.72■■■□□ 2.19
KIAA0040-204ENST00000563563 ZNF644Q9H582 1327 aaPredicted RBP28.71■■■□□ 2.19
KIAA0040-204ENST00000563563 TIAM1Q13009 1591 aa28.71■■■□□ 2.19
KIAA0040-204ENST00000563563 POLR1AO95602 1720 aaPredicted RBP28.69■■■□□ 2.18
KIAA0040-204ENST00000563563 LOC105371045A0A1W2PR82 267 aa28.69■■■□□ 2.18
KIAA0040-204ENST00000563563 CPS1P31327 1500 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms