RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
RPAP1-204ENST00000562303 KIAA1211Q6ZU35 1233 aa14.3□□□□□ -0.12
RPAP1-204ENST00000562303 CHAF1AQ13111 956 aaPredicted RBP14.3□□□□□ -0.12
RPAP1-204ENST00000562303 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
RPAP1-204ENST00000562303 RB1CC1Q8TDY2 1594 aa14.29□□□□□ -0.12
RPAP1-204ENST00000562303 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
RPAP1-204ENST00000562303 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
RPAP1-204ENST00000562303 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
RPAP1-204ENST00000562303 KIAA2012Q0VF49 1180 aa14.27□□□□□ -0.13
RPAP1-204ENST00000562303 IPO8O15397 1037 aaKnown RBP14.26□□□□□ -0.13
RPAP1-204ENST00000562303 NOP58Q9Y2X3 529 aaKnown RBP14.26□□□□□ -0.13
RPAP1-204ENST00000562303 GORABQ5T7V8 394 aa14.25□□□□□ -0.13
RPAP1-204ENST00000562303 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
RPAP1-204ENST00000562303 G3V3G9 751 aa14.25□□□□□ -0.13
RPAP1-204ENST00000562303 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
RPAP1-204ENST00000562303 CHMP3Q9Y3E7 222 aa14.24□□□□□ -0.13
RPAP1-204ENST00000562303 RTN4Q9NQC3 1192 aaKnown RBP14.24□□□□□ -0.13
RPAP1-204ENST00000562303 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
RPAP1-204ENST00000562303 CALD1Q05682 793 aaKnown RBP14.23□□□□□ -0.13
RPAP1-204ENST00000562303 TAF7LQ5H9L4 462 aa14.23□□□□□ -0.13
RPAP1-204ENST00000562303 PRM3Q9NNZ6 103 aa14.23□□□□□ -0.13
RPAP1-204ENST00000562303 U2AF1L5P0DN76 240 aaPredicted RBP14.22□□□□□ -0.13
RPAP1-204ENST00000562303 U2AF1Q01081 240 aaKnown RBP eCLIP14.22□□□□□ -0.13
RPAP1-204ENST00000562303 MSNP26038 577 aaKnown RBP14.22□□□□□ -0.13
RPAP1-204ENST00000562303 ITPRIPQ8IWB1 547 aa14.2□□□□□ -0.14
RPAP1-204ENST00000562303 NOC3LQ8WTT2 800 aaKnown RBP14.2□□□□□ -0.14
RPAP1-204ENST00000562303 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
RPAP1-204ENST00000562303 STK31Q9BXU1 1019 aa14.19□□□□□ -0.14
RPAP1-204ENST00000562303 FHAD1B1AJZ9 1412 aa14.19□□□□□ -0.14
RPAP1-204ENST00000562303 SPAG9O60271 1321 aaKnown RBP14.19□□□□□ -0.14
RPAP1-204ENST00000562303 CHMP4AQ9BY43 222 aa14.19□□□□□ -0.14
RPAP1-204ENST00000562303 KTN1Q86UP2 1357 aaKnown RBP14.19□□□□□ -0.14
RPAP1-204ENST00000562303 PKD2Q13563 968 aa14.18□□□□□ -0.14
RPAP1-204ENST00000562303 HTATSF1O43719 755 aaKnown RBP14.18□□□□□ -0.14
RPAP1-204ENST00000562303 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
RPAP1-204ENST00000562303 HSP90B1P14625 803 aaKnown RBP14.16□□□□□ -0.14
RPAP1-204ENST00000562303 EID1Q9Y6B2 187 aa14.16□□□□□ -0.14
RPAP1-204ENST00000562303 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
RPAP1-204ENST00000562303 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
RPAP1-204ENST00000562303 RASSF8Q8NHQ8 419 aa14.15□□□□□ -0.14
RPAP1-204ENST00000562303 RWDD1Q9H446 243 aaPredicted RBP14.15□□□□□ -0.14
RPAP1-204ENST00000562303 HSPA5P11021 654 aaKnown RBP14.14□□□□□ -0.15
RPAP1-204ENST00000562303 PDE4CQ08493 712 aa14.14□□□□□ -0.15
RPAP1-204ENST00000562303 NGDNQ8NEJ9 315 aaKnown RBP14.14□□□□□ -0.15
RPAP1-204ENST00000562303 CARMIL1Q5VZK9 1371 aa14.14□□□□□ -0.15
RPAP1-204ENST00000562303 FRAT2O75474 233 aaPredicted RBP14.14□□□□□ -0.15
RPAP1-204ENST00000562303 HDAC5Q9UQL6 1122 aa14.13□□□□□ -0.15
RPAP1-204ENST00000562303 ROCK2O75116 1388 aaKnown RBP14.13□□□□□ -0.15
RPAP1-204ENST00000562303 TRIM6-TRIM34B2RNG4 842 aa14.13□□□□□ -0.15
RPAP1-204ENST00000562303 TPM4P67936 248 aa14.13□□□□□ -0.15
RPAP1-204ENST00000562303 CCDC34Q96HJ3 373 aa14.12□□□□□ -0.15
RPAP1-204ENST00000562303 GBP4Q96PP9 640 aa14.12□□□□□ -0.15
RPAP1-204ENST00000562303 FOXD1Q16676 465 aa14.12□□□□□ -0.15
RPAP1-204ENST00000562303 EFCAB2Q5VUJ9 269 aa14.12□□□□□ -0.15
RPAP1-204ENST00000562303 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 VPS53Q5VIR6 699 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 CARMIL2Q6F5E8 1435 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 SLC4A10Q6U841 1118 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 LTV1Q96GA3 475 aaPredicted RBP14.11□□□□□ -0.15
RPAP1-204ENST00000562303 CUX2O14529 1486 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 AMPHP49418 695 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 TERF2IPQ9NYB0 399 aa14.1□□□□□ -0.15
RPAP1-204ENST00000562303 HMMRO75330 724 aa14.1□□□□□ -0.15
RPAP1-204ENST00000562303 NUTM2DQ5VT03 806 aaPredicted RBP14.09□□□□□ -0.15
RPAP1-204ENST00000562303 PTMSP20962 102 aa14.09□□□□□ -0.15
RPAP1-204ENST00000562303 MARCH6O60337 910 aa14.09□□□□□ -0.15
RPAP1-204ENST00000562303 SMC4Q9NTJ3 1288 aa14.09□□□□□ -0.15
RPAP1-204ENST00000562303 CREBRFQ8IUR6 639 aa14.08□□□□□ -0.15
RPAP1-204ENST00000562303 EIF3AQ14152 1382 aaKnown RBP14.08□□□□□ -0.15
RPAP1-204ENST00000562303 KIF3BO15066 747 aa14.08□□□□□ -0.16
RPAP1-204ENST00000562303 SYAP1Q96A49 352 aaPredicted RBP14.08□□□□□ -0.16
RPAP1-204ENST00000562303 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.07□□□□□ -0.16
RPAP1-204ENST00000562303 NUTM2FA1L443 756 aa14.07□□□□□ -0.16
RPAP1-204ENST00000562303 TIMELESSQ9UNS1 1208 aa14.07□□□□□ -0.16
RPAP1-204ENST00000562303 NUP155O75694 1391 aa14.07□□□□□ -0.16
RPAP1-204ENST00000562303 A0A0U1RQG5 324 aaPredicted RBP14.07□□□□□ -0.16
RPAP1-204ENST00000562303 RCAN3Q9UKA8 241 aa14.07□□□□□ -0.16
RPAP1-204ENST00000562303 ARHGAP35Q9NRY4 1499 aa14.06□□□□□ -0.16
RPAP1-204ENST00000562303 RALBP1Q15311 655 aa14.06□□□□□ -0.16
RPAP1-204ENST00000562303 MFAP1P55081 439 aaKnown RBP14.05□□□□□ -0.16
RPAP1-204ENST00000562303 PMFBP1Q8TBY8 1022 aa14.05□□□□□ -0.16
RPAP1-204ENST00000562303 GZF1Q9H116 711 aaPredicted RBP14.05□□□□□ -0.16
RPAP1-204ENST00000562303 CCER2I3L3R5 266 aa14.05□□□□□ -0.16
RPAP1-204ENST00000562303 MSH5O43196 834 aa14.05□□□□□ -0.16
RPAP1-204ENST00000562303 CEP89Q96ST8 783 aa14.05□□□□□ -0.16
RPAP1-204ENST00000562303 NOL8Q76FK4 1167 aaKnown RBP14.05□□□□□ -0.16
RPAP1-204ENST00000562303 SETD5Q9C0A6 1442 aa14.04□□□□□ -0.16
RPAP1-204ENST00000562303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.04□□□□□ -0.16
RPAP1-204ENST00000562303 SLKQ9H2G2 1235 aaPredicted RBP14.04□□□□□ -0.16
RPAP1-204ENST00000562303 LMOD3Q0VAK6 560 aa14.04□□□□□ -0.16
RPAP1-204ENST00000562303 WASHC2CQ9Y4E1 1318 aa14.04□□□□□ -0.16
RPAP1-204ENST00000562303 ANKRD30AQ9BXX3 1397 aa14.02□□□□□ -0.17
RPAP1-204ENST00000562303 CSPP1Q1MSJ5 1256 aa14.02□□□□□ -0.17
RPAP1-204ENST00000562303 EVA1CP58658 441 aa14.01□□□□□ -0.17
RPAP1-204ENST00000562303 MPHOSPH9Q99550 1183 aa14.01□□□□□ -0.17
RPAP1-204ENST00000562303 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
RPAP1-204ENST00000562303 CLUAP1Q96AJ1 413 aa14.01□□□□□ -0.17
RPAP1-204ENST00000562303 CCDC180Q9P1Z9 1646 aa14□□□□□ -0.17
RPAP1-204ENST00000562303 ANO8Q9HCE9 1232 aaPredicted RBP14□□□□□ -0.17
RPAP1-204ENST00000562303 SF3A1Q15459 793 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms