RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 ABCC2Q92887 1545 aa18.45■□□□□ 0.54
AC055717.2-201ENST00000561864 ABCC5O15440 1437 aa18.44■□□□□ 0.54
AC055717.2-201ENST00000561864 PLEKHD1A6NEE1 506 aa18.44■□□□□ 0.54
AC055717.2-201ENST00000561864 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
AC055717.2-201ENST00000561864 DIEXFQ68CQ4 756 aaKnown RBP18.42■□□□□ 0.54
AC055717.2-201ENST00000561864 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
AC055717.2-201ENST00000561864 UHRF1BP1LA0JNW5 1464 aa18.39■□□□□ 0.54
AC055717.2-201ENST00000561864 ADGRL2O95490 1459 aa18.39■□□□□ 0.54
AC055717.2-201ENST00000561864 CFDP1Q9UEE9 299 aaPredicted RBP18.39■□□□□ 0.53
AC055717.2-201ENST00000561864 PREX2Q70Z35 1606 aa18.38■□□□□ 0.53
AC055717.2-201ENST00000561864 SHANK2Q9UPX8 1470 aa18.38■□□□□ 0.53
AC055717.2-201ENST00000561864 KDM6BO15054 1643 aa18.38■□□□□ 0.53
AC055717.2-201ENST00000561864 RRP7BPQ9NSQ0 103 aa18.35■□□□□ 0.53
AC055717.2-201ENST00000561864 ARHGEF5Q12774 1597 aa18.34■□□□□ 0.53
AC055717.2-201ENST00000561864 CHIC2Q9UKJ5 165 aa18.34■□□□□ 0.53
AC055717.2-201ENST00000561864 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.53
AC055717.2-201ENST00000561864 ZCCHC11Q5TAX3 1644 aaKnown RBP18.31■□□□□ 0.52
AC055717.2-201ENST00000561864 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
AC055717.2-201ENST00000561864 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
AC055717.2-201ENST00000561864 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
AC055717.2-201ENST00000561864 CDC42BPBQ9Y5S2 1711 aa18.29■□□□□ 0.52
AC055717.2-201ENST00000561864 KDM5BQ9UGL1 1544 aa18.29■□□□□ 0.52
AC055717.2-201ENST00000561864 NCOA1Q15788 1441 aa18.29■□□□□ 0.52
AC055717.2-201ENST00000561864 SIN3AQ96ST3 1273 aa18.28■□□□□ 0.52
AC055717.2-201ENST00000561864 TTC37Q6PGP7 1564 aa18.28■□□□□ 0.52
AC055717.2-201ENST00000561864 MYO5CQ9NQX4 1742 aa18.28■□□□□ 0.52
AC055717.2-201ENST00000561864 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
AC055717.2-201ENST00000561864 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.28■□□□□ 0.52
AC055717.2-201ENST00000561864 DENND4BO75064 1496 aaPredicted RBP18.27■□□□□ 0.52
AC055717.2-201ENST00000561864 SAMD9LQ8IVG5 1584 aa18.27■□□□□ 0.52
AC055717.2-201ENST00000561864 CYB5RLQ6IPT4 315 aa18.26■□□□□ 0.51
AC055717.2-201ENST00000561864 TONSLQ96HA7 1378 aa18.26■□□□□ 0.51
AC055717.2-201ENST00000561864 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
AC055717.2-201ENST00000561864 C9orf84Q5VXU9 1444 aa18.24■□□□□ 0.51
AC055717.2-201ENST00000561864 MAST1Q9Y2H9 1570 aa18.23■□□□□ 0.51
AC055717.2-201ENST00000561864 CCDC141Q6ZP82 1450 aa18.23■□□□□ 0.51
AC055717.2-201ENST00000561864 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
AC055717.2-201ENST00000561864 TRIM52Q96A61 297 aa18.23■□□□□ 0.51
AC055717.2-201ENST00000561864 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
AC055717.2-201ENST00000561864 MBD5Q9P267 1494 aa18.22■□□□□ 0.51
AC055717.2-201ENST00000561864 ARHGAP5Q13017 1502 aa18.21■□□□□ 0.51
AC055717.2-201ENST00000561864 MPHOSPH9Q99550 1183 aa18.2■□□□□ 0.5
AC055717.2-201ENST00000561864 PPP1R15AO75807 674 aaPredicted RBP18.19■□□□□ 0.5
AC055717.2-201ENST00000561864 RSPH4AQ5TD94 716 aa18.19■□□□□ 0.5
AC055717.2-201ENST00000561864 PZPP20742 1482 aa18.19■□□□□ 0.5
AC055717.2-201ENST00000561864 ARAP3Q8WWN8 1544 aa18.18■□□□□ 0.5
AC055717.2-201ENST00000561864 KDM5DQ9BY66 1539 aa18.18■□□□□ 0.5
AC055717.2-201ENST00000561864 ANKRD50Q9ULJ7 1429 aa18.17■□□□□ 0.5
AC055717.2-201ENST00000561864 KIAA1107Q9UPP5 1409 aa18.17■□□□□ 0.5
AC055717.2-201ENST00000561864 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
AC055717.2-201ENST00000561864 PLXNC1O60486 1568 aa18.15■□□□□ 0.5
AC055717.2-201ENST00000561864 TSPY4P0CV99 314 aa18.14■□□□□ 0.49
AC055717.2-201ENST00000561864 TSPY10P0CW01 314 aa18.14■□□□□ 0.49
AC055717.2-201ENST00000561864 ANKRD30BQ9BXX2 1392 aa18.14■□□□□ 0.49
AC055717.2-201ENST00000561864 PLCH2O75038 1416 aa18.14■□□□□ 0.49
AC055717.2-201ENST00000561864 RPRD2Q5VT52 1461 aaKnown RBP18.13■□□□□ 0.49
AC055717.2-201ENST00000561864 KIF15Q9NS87 1388 aa18.12■□□□□ 0.49
AC055717.2-201ENST00000561864 WDR7Q9Y4E6 1490 aa18.12■□□□□ 0.49
AC055717.2-201ENST00000561864 ABCC1P33527 1531 aa18.11■□□□□ 0.49
AC055717.2-201ENST00000561864 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
AC055717.2-201ENST00000561864 ABCA9Q8IUA7 1624 aa18.09■□□□□ 0.49
AC055717.2-201ENST00000561864 HNRNPMP52272 730 aaKnown RBP eCLIP18.08■□□□□ 0.48
AC055717.2-201ENST00000561864 UNC13BO14795 1591 aa18.08■□□□□ 0.48
AC055717.2-201ENST00000561864 TEX14Q8IWB6 1497 aa18.07■□□□□ 0.48
AC055717.2-201ENST00000561864 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
AC055717.2-201ENST00000561864 MIER1Q8N108 512 aa18.05■□□□□ 0.48
AC055717.2-201ENST00000561864 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
AC055717.2-201ENST00000561864 KCNH8Q96L42 1107 aa18.03■□□□□ 0.48
AC055717.2-201ENST00000561864 ARHGEF12Q9NZN5 1544 aa18.03■□□□□ 0.48
AC055717.2-201ENST00000561864 NUP155O75694 1391 aa18.01■□□□□ 0.47
AC055717.2-201ENST00000561864 ERBINQ96RT1 1412 aa18■□□□□ 0.47
AC055717.2-201ENST00000561864 FOXD1Q16676 465 aa17.99■□□□□ 0.47
AC055717.2-201ENST00000561864 ASXL2Q76L83 1435 aa17.98■□□□□ 0.47
AC055717.2-201ENST00000561864 FAM135AQ9P2D6 1515 aa17.98■□□□□ 0.47
AC055717.2-201ENST00000561864 IQGAP3Q86VI3 1631 aa17.98■□□□□ 0.47
AC055717.2-201ENST00000561864 CENPBP07199 599 aaPredicted RBP17.98■□□□□ 0.47
AC055717.2-201ENST00000561864 MAGI2Q86UL8 1455 aa17.98■□□□□ 0.47
AC055717.2-201ENST00000561864 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
AC055717.2-201ENST00000561864 NPM1P06748 294 aaKnown RBP eCLIP17.96■□□□□ 0.47
AC055717.2-201ENST00000561864 PKD2Q13563 968 aa17.96■□□□□ 0.47
AC055717.2-201ENST00000561864 L3MBTL2Q969R5 705 aa17.96■□□□□ 0.47
AC055717.2-201ENST00000561864 ZFYVE16Q7Z3T8 1539 aa17.96■□□□□ 0.47
AC055717.2-201ENST00000561864 CFAP74Q9C0B2 1584 aa17.95■□□□□ 0.46
AC055717.2-201ENST00000561864 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
AC055717.2-201ENST00000561864 FANCAO15360 1455 aa17.95■□□□□ 0.46
AC055717.2-201ENST00000561864 TRAPPC8Q9Y2L5 1435 aa17.94■□□□□ 0.46
AC055717.2-201ENST00000561864 ATP7AQ04656 1500 aa17.89■□□□□ 0.45
AC055717.2-201ENST00000561864 ADGRL1O94910 1474 aa17.88■□□□□ 0.45
AC055717.2-201ENST00000561864 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
AC055717.2-201ENST00000561864 EIF2AK4Q9P2K8 1649 aaKnown RBP17.87■□□□□ 0.45
AC055717.2-201ENST00000561864 SPAG9O60271 1321 aaKnown RBP17.87■□□□□ 0.45
AC055717.2-201ENST00000561864 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
AC055717.2-201ENST00000561864 EIF4G2P78344 907 aaKnown RBP eCLIP17.86■□□□□ 0.45
AC055717.2-201ENST00000561864 POLR1AO95602 1720 aaPredicted RBP17.84■□□□□ 0.45
AC055717.2-201ENST00000561864 ATP10AO60312 1499 aa17.84■□□□□ 0.45
AC055717.2-201ENST00000561864 HSPA5P11021 654 aaKnown RBP17.83■□□□□ 0.44
AC055717.2-201ENST00000561864 DDX10Q13206 875 aaKnown RBP17.83■□□□□ 0.44
AC055717.2-201ENST00000561864 RALGAPBQ86X10 1494 aa17.82■□□□□ 0.44
AC055717.2-201ENST00000561864 SCAPERQ9BY12 1400 aa17.82■□□□□ 0.44
AC055717.2-201ENST00000561864 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms