RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 MAGI2Q86UL8 1455 aa18.46■□□□□ 0.55
RABGGTA-204ENST00000558376 MLECQ14165 292 aa18.46■□□□□ 0.55
RABGGTA-204ENST00000558376 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
RABGGTA-204ENST00000558376 ATP1B4Q9UN42 357 aaPredicted RBP18.43■□□□□ 0.54
RABGGTA-204ENST00000558376 FER1L4A9Z1Z3 1794 aa18.42■□□□□ 0.54
RABGGTA-204ENST00000558376 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
RABGGTA-204ENST00000558376 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
RABGGTA-204ENST00000558376 ATP10AO60312 1499 aa18.4■□□□□ 0.54
RABGGTA-204ENST00000558376 MYO5CQ9NQX4 1742 aa18.39■□□□□ 0.53
RABGGTA-204ENST00000558376 ARHGAP35Q9NRY4 1499 aa18.39■□□□□ 0.53
RABGGTA-204ENST00000558376 KIF14Q15058 1648 aa18.38■□□□□ 0.53
RABGGTA-204ENST00000558376 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
RABGGTA-204ENST00000558376 FMN1Q68DA7 1419 aa18.37■□□□□ 0.53
RABGGTA-204ENST00000558376 C9orf84Q5VXU9 1444 aa18.36■□□□□ 0.53
RABGGTA-204ENST00000558376 CEBPAP49715 358 aaPredicted RBP18.35■□□□□ 0.53
RABGGTA-204ENST00000558376 CERKQ8TCT0 537 aa18.34■□□□□ 0.53
RABGGTA-204ENST00000558376 CDK11AQ9UQ88 783 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-204ENST00000558376 AFAP1Q8N556 730 aa18.33■□□□□ 0.53
RABGGTA-204ENST00000558376 TROQ12816 1431 aaPredicted RBP18.33■□□□□ 0.53
RABGGTA-204ENST00000558376 LRRIQ1Q96JM4 1722 aa18.33■□□□□ 0.52
RABGGTA-204ENST00000558376 ARHGAP5Q13017 1502 aa18.3■□□□□ 0.52
RABGGTA-204ENST00000558376 ZNF518AQ6AHZ1 1483 aa18.3■□□□□ 0.52
RABGGTA-204ENST00000558376 PREX1Q8TCU6 1659 aa18.29■□□□□ 0.52
RABGGTA-204ENST00000558376 KDM5CP41229 1560 aa18.29■□□□□ 0.52
RABGGTA-204ENST00000558376 SETD1BQ9UPS6 1966 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-204ENST00000558376 CDC42BPBQ9Y5S2 1711 aa18.28■□□□□ 0.52
RABGGTA-204ENST00000558376 MYT1LQ9UL68 1186 aa18.26■□□□□ 0.51
RABGGTA-204ENST00000558376 STRCQ7RTU9 1775 aa18.26■□□□□ 0.51
RABGGTA-204ENST00000558376 DIP2CQ9Y2E4 1556 aa18.26■□□□□ 0.51
RABGGTA-204ENST00000558376 CLIP1P30622 1438 aa18.26■□□□□ 0.51
RABGGTA-204ENST00000558376 ABCA6Q8N139 1617 aa18.23■□□□□ 0.51
RABGGTA-204ENST00000558376 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
RABGGTA-204ENST00000558376 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
RABGGTA-204ENST00000558376 REREQ9P2R6 1566 aa18.22■□□□□ 0.51
RABGGTA-204ENST00000558376 PREX2Q70Z35 1606 aa18.2■□□□□ 0.5
RABGGTA-204ENST00000558376 C3P01024 1663 aa18.2■□□□□ 0.5
RABGGTA-204ENST00000558376 UHRF1BP1Q6BDS2 1440 aa18.2■□□□□ 0.5
RABGGTA-204ENST00000558376 ABCC1P33527 1531 aa18.19■□□□□ 0.5
RABGGTA-204ENST00000558376 ITSN2Q9NZM3 1697 aa18.18■□□□□ 0.5
RABGGTA-204ENST00000558376 DMRT2Q9Y5R5 561 aa18.18■□□□□ 0.5
RABGGTA-204ENST00000558376 AGLP35573 1532 aa18.18■□□□□ 0.5
RABGGTA-204ENST00000558376 CASKIN1Q8WXD9 1431 aa18.18■□□□□ 0.5
RABGGTA-204ENST00000558376 KIDINS220Q9ULH0 1771 aa18.17■□□□□ 0.5
RABGGTA-204ENST00000558376 CDC42BPAQ5VT25 1732 aa18.16■□□□□ 0.5
RABGGTA-204ENST00000558376 CCDC18Q5T9S5 1454 aa18.15■□□□□ 0.5
RABGGTA-204ENST00000558376 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
RABGGTA-204ENST00000558376 PTPRTO14522 1441 aa18.12■□□□□ 0.49
RABGGTA-204ENST00000558376 ZNF777Q9ULD5 760 aaPredicted RBP18.11■□□□□ 0.49
RABGGTA-204ENST00000558376 SAMD9LQ8IVG5 1584 aa18.1■□□□□ 0.49
RABGGTA-204ENST00000558376 HNRNPMP52272 730 aaKnown RBP eCLIP18.08■□□□□ 0.49
RABGGTA-204ENST00000558376 CNTLNQ9NXG0 1405 aa18.08■□□□□ 0.48
RABGGTA-204ENST00000558376 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
RABGGTA-204ENST00000558376 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
RABGGTA-204ENST00000558376 LTBP4Q8N2S1 1624 aa18.06■□□□□ 0.48
RABGGTA-204ENST00000558376 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
RABGGTA-204ENST00000558376 SYCP2Q9BX26 1530 aa18.06■□□□□ 0.48
RABGGTA-204ENST00000558376 ILDR2Q71H61 639 aa18.05■□□□□ 0.48
RABGGTA-204ENST00000558376 SPAG9O60271 1321 aaKnown RBP18.05■□□□□ 0.48
RABGGTA-204ENST00000558376 SUPT6HQ7KZ85 1726 aaKnown RBP18.05■□□□□ 0.48
RABGGTA-204ENST00000558376 ZMYM3Q14202 1370 aa18.04■□□□□ 0.48
RABGGTA-204ENST00000558376 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
RABGGTA-204ENST00000558376 MROH2AA6NES4 1674 aa18.04■□□□□ 0.48
RABGGTA-204ENST00000558376 NPATQ14207 1427 aa18.02■□□□□ 0.48
RABGGTA-204ENST00000558376 CAMSAP1Q5T5Y3 1602 aa18.01■□□□□ 0.47
RABGGTA-204ENST00000558376 NCKAP5LQ9HCH0 1330 aa18■□□□□ 0.47
RABGGTA-204ENST00000558376 CFDP1Q9UEE9 299 aaPredicted RBP18■□□□□ 0.47
RABGGTA-204ENST00000558376 ATP7AQ04656 1500 aa18■□□□□ 0.47
RABGGTA-204ENST00000558376 CLTCQ00610 1675 aaKnown RBP18■□□□□ 0.47
RABGGTA-204ENST00000558376 KIAA1107Q9UPP5 1409 aa18■□□□□ 0.47
RABGGTA-204ENST00000558376 LOC105371045A0A1W2PR82 267 aa17.99■□□□□ 0.47
RABGGTA-204ENST00000558376 A2MP01023 1474 aa17.98■□□□□ 0.47
RABGGTA-204ENST00000558376 PLXNC1O60486 1568 aa17.98■□□□□ 0.47
RABGGTA-204ENST00000558376 INO80Q9ULG1 1556 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-204ENST00000558376 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
RABGGTA-204ENST00000558376 PLEKHH2Q8IVE3 1493 aa17.96■□□□□ 0.47
RABGGTA-204ENST00000558376 GGT6Q6P531 493 aa17.96■□□□□ 0.47
RABGGTA-204ENST00000558376 IQSEC2Q5JU85 1478 aa17.96■□□□□ 0.47
RABGGTA-204ENST00000558376 ZNF644Q9H582 1327 aaPredicted RBP17.95■□□□□ 0.46
RABGGTA-204ENST00000558376 PTPRKQ15262 1439 aa17.95■□□□□ 0.46
RABGGTA-204ENST00000558376 ZNF335Q9H4Z2 1342 aaPredicted RBP17.94■□□□□ 0.46
RABGGTA-204ENST00000558376 MYO3AQ8NEV4 1616 aa17.93■□□□□ 0.46
RABGGTA-204ENST00000558376 MTUS2Q5JR59 1369 aa17.93■□□□□ 0.46
RABGGTA-204ENST00000558376 ZNF142P52746 1687 aaPredicted RBP17.92■□□□□ 0.46
RABGGTA-204ENST00000558376 SOCS7O14512 581 aa17.92■□□□□ 0.46
RABGGTA-204ENST00000558376 SPATA31D1Q6ZQQ2 1576 aa17.91■□□□□ 0.46
RABGGTA-204ENST00000558376 ADGBQ8N7X0 1667 aa17.9■□□□□ 0.46
RABGGTA-204ENST00000558376 CEP170BQ9Y4F5 1589 aaPredicted RBP17.9■□□□□ 0.46
RABGGTA-204ENST00000558376 MBD5Q9P267 1494 aa17.9■□□□□ 0.46
RABGGTA-204ENST00000558376 PKD2Q13563 968 aa17.9■□□□□ 0.46
RABGGTA-204ENST00000558376 TIAM1Q13009 1591 aa17.9■□□□□ 0.46
RABGGTA-204ENST00000558376 PLA2R1Q13018 1463 aa17.89■□□□□ 0.45
RABGGTA-204ENST00000558376 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
RABGGTA-204ENST00000558376 TCOF1Q13428 1488 aaKnown RBP17.89■□□□□ 0.45
RABGGTA-204ENST00000558376 UBAP1LF5GYI3 381 aa17.86■□□□□ 0.45
RABGGTA-204ENST00000558376 RTEL1-TNFRSF6BF6WH68 1400 aa17.85■□□□□ 0.45
RABGGTA-204ENST00000558376 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-204ENST00000558376 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.45
RABGGTA-204ENST00000558376 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.44
RABGGTA-204ENST00000558376 FBXO31Q5XUX0 539 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-204ENST00000558376 A2ML1A8K2U0 1454 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms