RNA–Protein interactions for RNA: ENST00000555592.1

NPC2-206, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-206ENST00000555592 SCAPERQ9BY12 1400 aa30.15■■■□□ 2.42
NPC2-206ENST00000555592 MLECQ14165 292 aa30.15■■■□□ 2.42
NPC2-206ENST00000555592 PLCH2O75038 1416 aa30.14■■■□□ 2.42
NPC2-206ENST00000555592 ATP1B4Q9UN42 357 aaPredicted RBP30.1■■■□□ 2.41
NPC2-206ENST00000555592 EHMT2Q96KQ7 1210 aa30.09■■■□□ 2.41
NPC2-206ENST00000555592 KIF14Q15058 1648 aa30.07■■■□□ 2.4
NPC2-206ENST00000555592 FMN1Q68DA7 1419 aa30.05■■■□□ 2.4
NPC2-206ENST00000555592 ATP10AO60312 1499 aa30.05■■■□□ 2.4
NPC2-206ENST00000555592 UBTFP17480 764 aaKnown RBP30.04■■■□□ 2.4
NPC2-206ENST00000555592 ARHGEF12Q9NZN5 1544 aa30.03■■■□□ 2.4
NPC2-206ENST00000555592 EFCAB2Q5VUJ9 269 aa30.03■■■□□ 2.4
NPC2-206ENST00000555592 C9orf84Q5VXU9 1444 aa30.03■■■□□ 2.4
NPC2-206ENST00000555592 ARHGAP35Q9NRY4 1499 aa30.02■■■□□ 2.4
NPC2-206ENST00000555592 PREX1Q8TCU6 1659 aa30.01■■■□□ 2.4
NPC2-206ENST00000555592 LRRIQ1Q96JM4 1722 aa29.99■■■□□ 2.39
NPC2-206ENST00000555592 CDK11AQ9UQ88 783 aaPredicted RBP29.98■■■□□ 2.39
NPC2-206ENST00000555592 ARHGAP5Q13017 1502 aa29.96■■■□□ 2.39
NPC2-206ENST00000555592 ZNF518AQ6AHZ1 1483 aa29.95■■■□□ 2.39
NPC2-206ENST00000555592 TROQ12816 1431 aaPredicted RBP29.94■■■□□ 2.38
NPC2-206ENST00000555592 KDM5CP41229 1560 aa29.93■■■□□ 2.38
NPC2-206ENST00000555592 CERKQ8TCT0 537 aa29.92■■■□□ 2.38
NPC2-206ENST00000555592 CDC42BPBQ9Y5S2 1711 aa29.91■■■□□ 2.38
NPC2-206ENST00000555592 CLIP1P30622 1438 aa29.9■■■□□ 2.38
NPC2-206ENST00000555592 CEBPAP49715 358 aaPredicted RBP29.9■■■□□ 2.38
NPC2-206ENST00000555592 SETD1BQ9UPS6 1966 aaKnown RBP29.9■■■□□ 2.38
NPC2-206ENST00000555592 AFAP1Q8N556 730 aa29.89■■■□□ 2.38
NPC2-206ENST00000555592 DIP2CQ9Y2E4 1556 aa29.88■■■□□ 2.37
NPC2-206ENST00000555592 MYT1LQ9UL68 1186 aa29.87■■■□□ 2.37
NPC2-206ENST00000555592 STRCQ7RTU9 1775 aa29.85■■■□□ 2.37
NPC2-206ENST00000555592 ABCA6Q8N139 1617 aa29.85■■■□□ 2.37
NPC2-206ENST00000555592 PREX2Q70Z35 1606 aa29.82■■■□□ 2.36
NPC2-206ENST00000555592 REREQ9P2R6 1566 aa29.82■■■□□ 2.36
NPC2-206ENST00000555592 UHRF1BP1Q6BDS2 1440 aa29.79■■■□□ 2.36
NPC2-206ENST00000555592 C3P01024 1663 aa29.79■■■□□ 2.36
NPC2-206ENST00000555592 ITSN2Q9NZM3 1697 aa29.79■■■□□ 2.36
NPC2-206ENST00000555592 MLH3Q9UHC1 1453 aa29.77■■■□□ 2.36
NPC2-206ENST00000555592 ABCC1P33527 1531 aa29.76■■■□□ 2.36
NPC2-206ENST00000555592 CDC42BPAQ5VT25 1732 aa29.74■■■□□ 2.35
NPC2-206ENST00000555592 TRAPPC8Q9Y2L5 1435 aa29.73■■■□□ 2.35
NPC2-206ENST00000555592 DMRT2Q9Y5R5 561 aa29.72■■■□□ 2.35
NPC2-206ENST00000555592 CCDC18Q5T9S5 1454 aa29.72■■■□□ 2.35
NPC2-206ENST00000555592 KIDINS220Q9ULH0 1771 aa29.72■■■□□ 2.35
NPC2-206ENST00000555592 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
NPC2-206ENST00000555592 AGLP35573 1532 aa29.71■■■□□ 2.35
NPC2-206ENST00000555592 CASKIN1Q8WXD9 1431 aa29.7■■■□□ 2.34
NPC2-206ENST00000555592 ESF1Q9H501 851 aaKnown RBP29.67■■■□□ 2.34
NPC2-206ENST00000555592 PTPRTO14522 1441 aa29.6■■■□□ 2.33
NPC2-206ENST00000555592 SAMD9LQ8IVG5 1584 aa29.59■■■□□ 2.33
NPC2-206ENST00000555592 FYCO1Q9BQS8 1478 aa29.58■■■□□ 2.33
NPC2-206ENST00000555592 CNTLNQ9NXG0 1405 aa29.57■■■□□ 2.32
NPC2-206ENST00000555592 SUPT6HQ7KZ85 1726 aaKnown RBP29.57■■■□□ 2.32
NPC2-206ENST00000555592 MROH2AA6NES4 1674 aa29.56■■■□□ 2.32
NPC2-206ENST00000555592 ZNF777Q9ULD5 760 aaPredicted RBP29.56■■■□□ 2.32
NPC2-206ENST00000555592 SYCP2Q9BX26 1530 aa29.55■■■□□ 2.32
NPC2-206ENST00000555592 NCOA1Q15788 1441 aa29.51■■■□□ 2.31
NPC2-206ENST00000555592 DISP3Q9P2K9 1392 aa29.51■■■□□ 2.31
NPC2-206ENST00000555592 LTBP4Q8N2S1 1624 aa29.5■■■□□ 2.31
NPC2-206ENST00000555592 GPATCH8Q9UKJ3 1502 aaKnown RBP29.5■■■□□ 2.31
NPC2-206ENST00000555592 SPAG9O60271 1321 aaKnown RBP29.47■■■□□ 2.31
NPC2-206ENST00000555592 CLTCQ00610 1675 aaKnown RBP29.47■■■□□ 2.31
NPC2-206ENST00000555592 CAMSAP1Q5T5Y3 1602 aa29.47■■■□□ 2.31
NPC2-206ENST00000555592 NPATQ14207 1427 aa29.46■■■□□ 2.31
NPC2-206ENST00000555592 ATP7AQ04656 1500 aa29.46■■■□□ 2.31
NPC2-206ENST00000555592 HNRNPMP52272 730 aaKnown RBP eCLIP29.46■■■□□ 2.31
NPC2-206ENST00000555592 INO80Q9ULG1 1556 aaPredicted RBP29.44■■■□□ 2.3
NPC2-206ENST00000555592 ZMYM3Q14202 1370 aa29.43■■■□□ 2.3
NPC2-206ENST00000555592 PLXNC1O60486 1568 aa29.42■■■□□ 2.3
NPC2-206ENST00000555592 ILDR2Q71H61 639 aa29.41■■■□□ 2.3
NPC2-206ENST00000555592 IQSEC2Q5JU85 1478 aa29.4■■■□□ 2.3
NPC2-206ENST00000555592 PLEKHH2Q8IVE3 1493 aa29.4■■■□□ 2.3
NPC2-206ENST00000555592 MYO3AQ8NEV4 1616 aa29.39■■■□□ 2.3
NPC2-206ENST00000555592 CFDP1Q9UEE9 299 aaPredicted RBP29.39■■■□□ 2.3
NPC2-206ENST00000555592 ZNF142P52746 1687 aaPredicted RBP29.39■■■□□ 2.3
NPC2-206ENST00000555592 SPATA31D1Q6ZQQ2 1576 aa29.39■■■□□ 2.29
NPC2-206ENST00000555592 KIAA1107Q9UPP5 1409 aa29.38■■■□□ 2.29
NPC2-206ENST00000555592 A2MP01023 1474 aa29.37■■■□□ 2.29
NPC2-206ENST00000555592 CCNB3Q8WWL7 1395 aa29.37■■■□□ 2.29
NPC2-206ENST00000555592 ADGBQ8N7X0 1667 aa29.35■■■□□ 2.29
NPC2-206ENST00000555592 NCKAP5LQ9HCH0 1330 aa29.34■■■□□ 2.29
NPC2-206ENST00000555592 CEP170BQ9Y4F5 1589 aaPredicted RBP29.32■■■□□ 2.28
NPC2-206ENST00000555592 GGT6Q6P531 493 aa29.31■■■□□ 2.28
NPC2-206ENST00000555592 PTPRKQ15262 1439 aa29.3■■■□□ 2.28
NPC2-206ENST00000555592 MTUS2Q5JR59 1369 aa29.3■■■□□ 2.28
NPC2-206ENST00000555592 PLA2R1Q13018 1463 aa29.28■■■□□ 2.28
NPC2-206ENST00000555592 TIAM1Q13009 1591 aa29.27■■■□□ 2.28
NPC2-206ENST00000555592 ZNF335Q9H4Z2 1342 aaPredicted RBP29.27■■■□□ 2.28
NPC2-206ENST00000555592 SOCS7O14512 581 aa29.27■■■□□ 2.28
NPC2-206ENST00000555592 TCOF1Q13428 1488 aaKnown RBP29.23■■■□□ 2.27
NPC2-206ENST00000555592 ZNF644Q9H582 1327 aaPredicted RBP29.23■■■□□ 2.27
NPC2-206ENST00000555592 PKD2Q13563 968 aa29.23■■■□□ 2.27
NPC2-206ENST00000555592 EHBP1L1Q8N3D4 1523 aa29.2■■■□□ 2.27
NPC2-206ENST00000555592 UBAP1LF5GYI3 381 aa29.19■■■□□ 2.26
NPC2-206ENST00000555592 PPP6R1Q9UPN7 881 aa29.19■■■□□ 2.26
NPC2-206ENST00000555592 MBD5Q9P267 1494 aa29.18■■■□□ 2.26
NPC2-206ENST00000555592 DNMT1P26358 1616 aaKnown RBP29.16■■■□□ 2.26
NPC2-206ENST00000555592 A2ML1A8K2U0 1454 aa29.16■■■□□ 2.26
NPC2-206ENST00000555592 POLR1AO95602 1720 aaPredicted RBP29.15■■■□□ 2.26
NPC2-206ENST00000555592 RTEL1-TNFRSF6BF6WH68 1400 aa29.14■■■□□ 2.26
NPC2-206ENST00000555592 CEP162Q5TB80 1403 aa29.11■■■□□ 2.25
NPC2-206ENST00000555592 DHX29Q7Z478 1369 aaKnown RBP29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms