RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 GPHNQ9NQX3 736 aaPredicted RBP9.15□□□□□ -0.94
PABPN1-204ENST00000554062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.15□□□□□ -0.942e-28■■□□□ 14.1
PABPN1-204ENST00000554062 BARGINQ6ZT62 677 aa9.14□□□□□ -0.95
PABPN1-204ENST00000554062 ILDR1Q86SU0 546 aaPredicted RBP9.14□□□□□ -0.95
PABPN1-204ENST00000554062 GPIHBP1Q8IV16 184 aa9.14□□□□□ -0.95
PABPN1-204ENST00000554062 ARXQ96QS3 562 aa9.13□□□□□ -0.95
PABPN1-204ENST00000554062 AK7Q96M32 723 aa9.12□□□□□ -0.95
PABPN1-204ENST00000554062 C19orf67A6NJJ6 358 aa9.11□□□□□ -0.95
PABPN1-204ENST00000554062 TTLL13PA6NNM8 815 aa9.11□□□□□ -0.95
PABPN1-204ENST00000554062 TMC2Q8TDI7 906 aa9.11□□□□□ -0.95
PABPN1-204ENST00000554062 PDIA6Q15084 440 aa9.09□□□□□ -0.95
PABPN1-204ENST00000554062 G3V3G9 751 aa9.08□□□□□ -0.96
PABPN1-204ENST00000554062 KRI1Q8N9T8 703 aaKnown RBP9.07□□□□□ -0.96
PABPN1-204ENST00000554062 FOXK1P85037 733 aa9.05□□□□□ -0.96
PABPN1-204ENST00000554062 BMP2KQ9NSY1 1161 aaPredicted RBP9.05□□□□□ -0.96
PABPN1-204ENST00000554062 TRIM35Q9UPQ4 493 aa9.05□□□□□ -0.96
PABPN1-204ENST00000554062 DPYSL4O14531 572 aa9.04□□□□□ -0.96
PABPN1-204ENST00000554062 IER5LQ5T953 404 aa9.04□□□□□ -0.96
PABPN1-204ENST00000554062 MICALL2Q8IY33 904 aa9.04□□□□□ -0.96
PABPN1-204ENST00000554062 TRPC6Q9Y210 931 aa9.03□□□□□ -0.96
PABPN1-204ENST00000554062 RBM26Q5T8P6 1007 aaKnown RBP9.02□□□□□ -0.97
PABPN1-204ENST00000554062 MLLT3P42568 568 aaPredicted RBP9.01□□□□□ -0.97
PABPN1-204ENST00000554062 DSG2Q14126 1118 aa9.01□□□□□ -0.97
PABPN1-204ENST00000554062 ZNF316A6NFI3 1004 aaPredicted RBP8.99□□□□□ -0.97
PABPN1-204ENST00000554062 OCEL1Q9H607 264 aa8.99□□□□□ -0.97
PABPN1-204ENST00000554062 EMILIN3Q9NT22 766 aa8.99□□□□□ -0.97
PABPN1-204ENST00000554062 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
PABPN1-204ENST00000554062 HOMEZQ8IX15 550 aa8.97□□□□□ -0.97
PABPN1-204ENST00000554062 PLPP6Q8IY26 295 aa8.97□□□□□ -0.97
PABPN1-204ENST00000554062 L3MBTL3Q96JM7 780 aaPredicted RBP8.97□□□□□ -0.97
PABPN1-204ENST00000554062 TMEM121BQ9BXQ6 578 aaPredicted RBP8.97□□□□□ -0.97
PABPN1-204ENST00000554062 GABBR2O75899 941 aa8.96□□□□□ -0.98
PABPN1-204ENST00000554062 MAP3K9P80192 1104 aa8.96□□□□□ -0.98
PABPN1-204ENST00000554062 PDCD7Q8N8D1 485 aaKnown RBP8.96□□□□□ -0.98
PABPN1-204ENST00000554062 MINK1Q8N4C8 1332 aaPredicted RBP8.96□□□□□ -0.98
PABPN1-204ENST00000554062 PLCG2P16885 1265 aa8.95□□□□□ -0.98
PABPN1-204ENST00000554062 PDE4DQ08499 809 aa8.95□□□□□ -0.98
PABPN1-204ENST00000554062 KDM4CQ9H3R0 1056 aa8.95□□□□□ -0.98
PABPN1-204ENST00000554062 TRIM66O15016 1216 aa8.94□□□□□ -0.98
PABPN1-204ENST00000554062 MAP2K5Q13163 448 aa8.94□□□□□ -0.98
PABPN1-204ENST00000554062 IRX5P78411 483 aaPredicted RBP8.93□□□□□ -0.98
PABPN1-204ENST00000554062 KIF3CO14782 793 aa8.92□□□□□ -0.98
PABPN1-204ENST00000554062 GALR2O43603 387 aaPredicted RBP8.92□□□□□ -0.98
PABPN1-204ENST00000554062 TBC1D12O60347 775 aa8.92□□□□□ -0.98
PABPN1-204ENST00000554062 HIC1Q14526 733 aa8.92□□□□□ -0.98
PABPN1-204ENST00000554062 DDRGK1Q96HY6 314 aa8.92□□□□□ -0.98
PABPN1-204ENST00000554062 C2orf72A6NCS6 295 aa8.91□□□□□ -0.98
PABPN1-204ENST00000554062 PTGER2P43116 358 aa8.91□□□□□ -0.98
PABPN1-204ENST00000554062 DPY19L2Q6NUT2 758 aa8.91□□□□□ -0.98
PABPN1-204ENST00000554062 GPBP1L1Q9HC44 474 aaPredicted RBP8.91□□□□□ -0.98
PABPN1-204ENST00000554062 NUTM2FA1L443 756 aa8.9□□□□□ -0.98
PABPN1-204ENST00000554062 FCHSD2O94868 740 aa8.9□□□□□ -0.98
PABPN1-204ENST00000554062 ASTLQ6HA08 431 aaPredicted RBP8.9□□□□□ -0.98
PABPN1-204ENST00000554062 GNPATO15228 680 aa8.89□□□□□ -0.99
PABPN1-204ENST00000554062 GPR37O15354 613 aa8.89□□□□□ -0.99
PABPN1-204ENST00000554062 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
PABPN1-204ENST00000554062 ATMINO43313 823 aaPredicted RBP8.88□□□□□ -0.99
PABPN1-204ENST00000554062 ATN1P54259 1190 aaPredicted RBP8.88□□□□□ -0.99
PABPN1-204ENST00000554062 AMHR2Q16671 573 aa8.88□□□□□ -0.99
PABPN1-204ENST00000554062 IL27Q8NEV9 243 aa8.87□□□□□ -0.99
PABPN1-204ENST00000554062 OXER1Q8TDS5 423 aa8.87□□□□□ -0.99
PABPN1-204ENST00000554062 IRF6O14896 467 aa8.86□□□□□ -0.99
PABPN1-204ENST00000554062 CCDC102AQ96A19 550 aa8.85□□□□□ -0.99
PABPN1-204ENST00000554062 SEC24BO95487 1268 aa8.83□□□□□ -1
PABPN1-204ENST00000554062 OSBPP22059 807 aa8.83□□□□□ -1
PABPN1-204ENST00000554062 UPF1Q92900 1129 aaKnown RBP eCLIP8.83□□□□□ -1
PABPN1-204ENST00000554062 GOPCQ9HD26 462 aa8.82□□□□□ -1
PABPN1-204ENST00000554062 POTEIP0CG38 1075 aa8.8□□□□□ -1
PABPN1-204ENST00000554062 FLIIQ13045 1269 aa8.8□□□□□ -1
PABPN1-204ENST00000554062 RSPH6AQ9H0K4 717 aa8.8□□□□□ -1
PABPN1-204ENST00000554062 EVI5O60447 810 aa8.79□□□□□ -1
PABPN1-204ENST00000554062 TTLL12Q14166 644 aaPredicted RBP8.79□□□□□ -1
PABPN1-204ENST00000554062 C3orf67Q6ZVT6 689 aa8.79□□□□□ -1
PABPN1-204ENST00000554062 DDX12PQ92771 950 aa8.79□□□□□ -1
PABPN1-204ENST00000554062 EPAS1Q99814 870 aa8.79□□□□□ -1
PABPN1-204ENST00000554062 ZMYND15Q9H091 742 aa8.79□□□□□ -1
PABPN1-204ENST00000554062 SLC34A2O95436 690 aa8.78□□□□□ -1
PABPN1-204ENST00000554062 LHX8Q68G74 356 aa8.78□□□□□ -1
PABPN1-204ENST00000554062 PARP9Q8IXQ6 854 aa8.78□□□□□ -1
PABPN1-204ENST00000554062 PTCD2Q8WV60 388 aaKnown RBP8.78□□□□□ -1
PABPN1-204ENST00000554062 SLC39A7Q92504 469 aa8.78□□□□□ -1
PABPN1-204ENST00000554062 PTGDRQ13258 359 aa8.77□□□□□ -1.01
PABPN1-204ENST00000554062 FAM117AQ9C073 453 aa8.77□□□□□ -1.01
PABPN1-204ENST00000554062 DCBLD2Q96PD2 775 aa8.76□□□□□ -1.01
PABPN1-204ENST00000554062 SUPT5HO00267 1087 aaKnown RBP8.75□□□□□ -1.01
PABPN1-204ENST00000554062 PHF14O94880 888 aa8.75□□□□□ -1.01
PABPN1-204ENST00000554062 C7P10643 843 aa8.75□□□□□ -1.01
PABPN1-204ENST00000554062 CLCN1P35523 988 aa8.74□□□□□ -1.01
PABPN1-204ENST00000554062 EN1Q05925 392 aaPredicted RBP8.73□□□□□ -1.01
PABPN1-204ENST00000554062 PCMTD1Q96MG8 357 aaPredicted RBP8.73□□□□□ -1.01
PABPN1-204ENST00000554062 ANO8Q9HCE9 1232 aaPredicted RBP8.73□□□□□ -1.01
PABPN1-204ENST00000554062 TMEM92Q6UXU6 159 aa8.72□□□□□ -1.01
PABPN1-204ENST00000554062 CERKQ8TCT0 537 aa8.72□□□□□ -1.01
PABPN1-204ENST00000554062 FBXW7Q969H0 707 aa8.72□□□□□ -1.01
PABPN1-204ENST00000554062 PLEKHG3A1L390 1219 aa8.71□□□□□ -1.02
PABPN1-204ENST00000554062 MAP3K7O43318 606 aa8.7□□□□□ -1.02
PABPN1-204ENST00000554062 GIGYF2Q6Y7W6 1299 aaKnown RBP8.7□□□□□ -1.02
PABPN1-204ENST00000554062 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
PABPN1-204ENST00000554062 SLAIN1Q8ND83 568 aa8.68□□□□□ -1.02
PABPN1-204ENST00000554062 GPCPD1Q9NPB8 672 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 873.3 ms