RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 ERBB3P21860 1342 aa8.19□□□□□ -1.1
FOXN3-203ENST00000553353 MS4A4AQ96JQ5 239 aa8.17□□□□□ -1.1
FOXN3-203ENST00000553353 PHF8Q9UPP1 1060 aa8.17□□□□□ -1.1
FOXN3-203ENST00000553353 CCDC180Q9P1Z9 1646 aa8.17□□□□□ -1.1
FOXN3-203ENST00000553353 NLRP6P59044 892 aa8.16□□□□□ -1.1
FOXN3-203ENST00000553353 TMEM92Q6UXU6 159 aa8.16□□□□□ -1.1
FOXN3-203ENST00000553353 VARS2Q5ST30 1063 aaKnown RBP8.12□□□□□ -1.11
FOXN3-203ENST00000553353 GPR153Q6NV75 609 aa8.12□□□□□ -1.11
FOXN3-203ENST00000553353 BCL11BQ9C0K0 894 aaPredicted RBP8.12□□□□□ -1.11
FOXN3-203ENST00000553353 ZNF687Q8N1G0 1237 aa8.1□□□□□ -1.11
FOXN3-203ENST00000553353 FBXO22Q8NEZ5 403 aa8.1□□□□□ -1.11
FOXN3-203ENST00000553353 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
FOXN3-203ENST00000553353 STK25O00506 426 aa8.06□□□□□ -1.12
FOXN3-203ENST00000553353 MFRPQ9BY79 579 aa8.06□□□□□ -1.12
FOXN3-203ENST00000553353 ECM2O94769 699 aaPredicted RBP8.05□□□□□ -1.12
FOXN3-203ENST00000553353 PTGER2P43116 358 aa8.05□□□□□ -1.12
FOXN3-203ENST00000553353 ARSIQ5FYB1 569 aa8.05□□□□□ -1.12
FOXN3-203ENST00000553353 RNF166Q96A37 237 aaPredicted RBP8.04□□□□□ -1.12
FOXN3-203ENST00000553353 RB1CC1Q8TDY2 1594 aa8.04□□□□□ -1.12
FOXN3-203ENST00000553353 ZNF316A6NFI3 1004 aaPredicted RBP8.02□□□□□ -1.13
FOXN3-203ENST00000553353 KIF3CO14782 793 aa8.02□□□□□ -1.13
FOXN3-203ENST00000553353 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.13
FOXN3-203ENST00000553353 C2orf72A6NCS6 295 aa8□□□□□ -1.13
FOXN3-203ENST00000553353 SLC34A2O95436 690 aa7.99□□□□□ -1.13
FOXN3-203ENST00000553353 PKD2Q13563 968 aa7.98□□□□□ -1.13
FOXN3-203ENST00000553353 TMC2Q8TDI7 906 aa7.97□□□□□ -1.13
FOXN3-203ENST00000553353 KHSRPQ92945 711 aaKnown RBP eCLIP7.97□□□□□ -1.131e-6■■■□□ 18.5
FOXN3-203ENST00000553353 RGL2O15211 777 aa7.96□□□□□ -1.14
FOXN3-203ENST00000553353 PBX2P40425 430 aa7.96□□□□□ -1.14
FOXN3-203ENST00000553353 BICRAQ9NZM4 1560 aa7.96□□□□□ -1.14
FOXN3-203ENST00000553353 CECR2Q9BXF3 1484 aa7.95□□□□□ -1.14
FOXN3-203ENST00000553353 ANKRD13DQ6ZTN6 518 aa7.95□□□□□ -1.14
FOXN3-203ENST00000553353 LSM11P83369 360 aaKnown RBP eCLIP7.94□□□□□ -1.145e-7■■■□□ 16.1
FOXN3-203ENST00000553353 PCDHGA4Q9Y5G9 962 aa7.94□□□□□ -1.14
FOXN3-203ENST00000553353 NUDT7P0C024 238 aa7.93□□□□□ -1.14
FOXN3-203ENST00000553353 NACADO15069 1562 aa7.92□□□□□ -1.14
FOXN3-203ENST00000553353 PSDA5PKW4 1024 aaPredicted RBP7.91□□□□□ -1.14
FOXN3-203ENST00000553353 LHX6Q9UPM6 363 aa7.91□□□□□ -1.14
FOXN3-203ENST00000553353 PPP1R37O75864 691 aa7.88□□□□□ -1.15
FOXN3-203ENST00000553353 PTCD2Q8WV60 388 aaKnown RBP7.87□□□□□ -1.15
FOXN3-203ENST00000553353 FOXK1P85037 733 aa7.86□□□□□ -1.15
FOXN3-203ENST00000553353 ARHGAP33O14559 1287 aa7.85□□□□□ -1.15
FOXN3-203ENST00000553353 POTEEQ6S8J3 1075 aa7.85□□□□□ -1.15
FOXN3-203ENST00000553353 HS6ST3Q8IZP7 471 aa7.85□□□□□ -1.15
FOXN3-203ENST00000553353 KDM4FA0A1W2PPD8 638 aa7.84□□□□□ -1.15
FOXN3-203ENST00000553353 GPHNQ9NQX3 736 aaPredicted RBP7.84□□□□□ -1.15
FOXN3-203ENST00000553353 AXIN2Q9Y2T1 843 aa7.84□□□□□ -1.15
FOXN3-203ENST00000553353 CC2D2AQ9P2K1 1620 aa7.84□□□□□ -1.15
FOXN3-203ENST00000553353 TBC1D12O60347 775 aa7.83□□□□□ -1.16
FOXN3-203ENST00000553353 PLPP6Q8IY26 295 aa7.82□□□□□ -1.16
FOXN3-203ENST00000553353 TK2O00142 265 aa7.81□□□□□ -1.16
FOXN3-203ENST00000553353 ADGRD1Q6QNK2 874 aa7.81□□□□□ -1.16
FOXN3-203ENST00000553353 RYDENQ9NUL5 291 aaKnown RBP7.81□□□□□ -1.16
FOXN3-203ENST00000553353 HCSTQ9UBK5 93 aa7.81□□□□□ -1.16
FOXN3-203ENST00000553353 PPP4R3BQ5MIZ7 849 aa7.79□□□□□ -1.16
FOXN3-203ENST00000553353 DSG2Q14126 1118 aa7.78□□□□□ -1.16
FOXN3-203ENST00000553353 SHROOM4Q9ULL8 1493 aa7.77□□□□□ -1.17
FOXN3-203ENST00000553353 CHGAP10645 457 aaKnown RBP7.76□□□□□ -1.17
FOXN3-203ENST00000553353 KCNH8Q96L42 1107 aa7.76□□□□□ -1.17
FOXN3-203ENST00000553353 CUX2O14529 1486 aa7.75□□□□□ -1.17
FOXN3-203ENST00000553353 MYO15BQ96JP2 1530 aa7.75□□□□□ -1.17
FOXN3-203ENST00000553353 HRO43593 1189 aa7.75□□□□□ -1.17
FOXN3-203ENST00000553353 PSEN2P49810 448 aa7.74□□□□□ -1.17
FOXN3-203ENST00000553353 PLA2G2EQ9NZK7 142 aa7.74□□□□□ -1.17
FOXN3-203ENST00000553353 EIF4G1Q04637 1599 aaKnown RBP7.74□□□□□ -1.17
FOXN3-203ENST00000553353 UNC13AQ9UPW8 1703 aa7.74□□□□□ -1.17
FOXN3-203ENST00000553353 DMRTA1Q5VZB9 504 aa7.73□□□□□ -1.17
FOXN3-203ENST00000553353 STAC3Q96MF2 364 aa7.73□□□□□ -1.17
FOXN3-203ENST00000553353 OXER1Q8TDS5 423 aa7.72□□□□□ -1.17
FOXN3-203ENST00000553353 CRISPLD2Q9H0B8 497 aa7.71□□□□□ -1.18
FOXN3-203ENST00000553353 DCAF8L2P0C7V8 631 aa7.7□□□□□ -1.18
FOXN3-203ENST00000553353 NKX1-1Q15270 411 aaPredicted RBP7.69□□□□□ -1.18
FOXN3-203ENST00000553353 PDE4AP27815 886 aa7.68□□□□□ -1.18
FOXN3-203ENST00000553353 PPP1R15BQ5SWA1 713 aa7.68□□□□□ -1.18
FOXN3-203ENST00000553353 KCNK17Q96T54 332 aa7.68□□□□□ -1.18
FOXN3-203ENST00000553353 SLC4A5Q9BY07 1137 aa7.68□□□□□ -1.18
FOXN3-203ENST00000553353 BCL2L12Q9HB09 334 aa7.67□□□□□ -1.18
FOXN3-203ENST00000553353 VPS9D1Q9Y2B5 631 aa7.67□□□□□ -1.18
FOXN3-203ENST00000553353 ZNF454Q8N9F8 522 aa7.66□□□□□ -1.18
FOXN3-203ENST00000553353 UPF1Q92900 1129 aaKnown RBP eCLIP7.66□□□□□ -1.18
FOXN3-203ENST00000553353 KCTD12Q96CX2 325 aaKnown RBP7.66□□□□□ -1.18
FOXN3-203ENST00000553353 ANO8Q9HCE9 1232 aaPredicted RBP7.65□□□□□ -1.18
FOXN3-203ENST00000553353 PTPREP23469 700 aa7.64□□□□□ -1.19
FOXN3-203ENST00000553353 FOSBP53539 338 aa7.64□□□□□ -1.19
FOXN3-203ENST00000553353 JPH4Q96JJ6 628 aa7.63□□□□□ -1.19
FOXN3-203ENST00000553353 NCKAP5LQ9HCH0 1330 aa7.62□□□□□ -1.19
FOXN3-203ENST00000553353 BHMG1C9JSJ3 638 aaPredicted RBP7.61□□□□□ -1.19
FOXN3-203ENST00000553353 GTPBP6O43824 516 aaPredicted RBP7.6□□□□□ -1.19
FOXN3-203ENST00000553353 EVI5O60447 810 aa7.6□□□□□ -1.19
FOXN3-203ENST00000553353 ZDHHC16Q969W1 377 aa7.6□□□□□ -1.19
FOXN3-203ENST00000553353 DDX27Q96GQ7 796 aaKnown RBP7.6□□□□□ -1.19
FOXN3-203ENST00000553353 IFFO2Q5TF58 517 aa7.59□□□□□ -1.19
FOXN3-203ENST00000553353 LARP6Q9BRS8 491 aaKnown RBP7.59□□□□□ -1.19
FOXN3-203ENST00000553353 ZBED2Q9BTP6 218 aa7.59□□□□□ -1.19
FOXN3-203ENST00000553353 GOLGA8CPA6NN73 597 aa7.58□□□□□ -1.2
FOXN3-203ENST00000553353 PTPN5P54829 565 aa7.58□□□□□ -1.2
FOXN3-203ENST00000553353 MAP3K9P80192 1104 aa7.58□□□□□ -1.2
FOXN3-203ENST00000553353 MFSD10Q14728 455 aa7.58□□□□□ -1.2
FOXN3-203ENST00000553353 MRPL50Q8N5N7 158 aaKnown RBP7.58□□□□□ -1.2
FOXN3-203ENST00000553353 RGS20O76081 388 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms