RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 BAZ1AQ9NRL2 1556 aaPredicted RBP4.7□□□□□ -1.66
CPSF6-207ENST00000551516 BAZ1BQ9UIG0 1483 aaKnown RBP4.7□□□□□ -1.66
CPSF6-207ENST00000551516 MS4A4AQ96JQ5 239 aa4.7□□□□□ -1.66
CPSF6-207ENST00000551516 LARP6Q9BRS8 491 aaKnown RBP4.7□□□□□ -1.66
CPSF6-207ENST00000551516 LAMC3Q9Y6N6 1575 aa4.7□□□□□ -1.66
CPSF6-207ENST00000551516 WDR62O43379 1518 aa4.69□□□□□ -1.66
CPSF6-207ENST00000551516 TTLL13PA6NNM8 815 aa4.69□□□□□ -1.66
CPSF6-207ENST00000551516 HAX1O00165 279 aa4.69□□□□□ -1.66
CPSF6-207ENST00000551516 DDX27Q96GQ7 796 aaKnown RBP4.69□□□□□ -1.66
CPSF6-207ENST00000551516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.69□□□□□ -1.662e-8■■■□□ 17.9
CPSF6-207ENST00000551516 PDS5BQ9NTI5 1447 aa4.69□□□□□ -1.66
CPSF6-207ENST00000551516 NCKAP5LQ9HCH0 1330 aa4.68□□□□□ -1.66
CPSF6-207ENST00000551516 CFTRP13569 1480 aa4.68□□□□□ -1.66
CPSF6-207ENST00000551516 LMOD2Q6P5Q4 547 aa4.67□□□□□ -1.66
CPSF6-207ENST00000551516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.67□□□□□ -1.66
CPSF6-207ENST00000551516 BMP2KQ9NSY1 1161 aaPredicted RBP4.67□□□□□ -1.66
CPSF6-207ENST00000551516 TRIM35Q9UPQ4 493 aa4.67□□□□□ -1.66
CPSF6-207ENST00000551516 GALR2O43603 387 aaPredicted RBP4.66□□□□□ -1.66
CPSF6-207ENST00000551516 MFSD10Q14728 455 aa4.66□□□□□ -1.66
CPSF6-207ENST00000551516 SMYD5Q6GMV2 418 aa4.66□□□□□ -1.66
CPSF6-207ENST00000551516 CRISPLD2Q9H0B8 497 aa4.66□□□□□ -1.66
CPSF6-207ENST00000551516 MRC2Q9UBG0 1479 aa4.66□□□□□ -1.66
CPSF6-207ENST00000551516 RSF1Q96T23 1441 aaPredicted RBP4.64□□□□□ -1.67
CPSF6-207ENST00000551516 URB2Q14146 1524 aaKnown RBP4.64□□□□□ -1.67
CPSF6-207ENST00000551516 G3V3G9 751 aa4.64□□□□□ -1.67
CPSF6-207ENST00000551516 ILDR1Q86SU0 546 aaPredicted RBP4.64□□□□□ -1.67
CPSF6-207ENST00000551516 SEMA3EO15041 775 aa4.63□□□□□ -1.67
CPSF6-207ENST00000551516 CAMK2BQ13554 666 aa4.63□□□□□ -1.67
CPSF6-207ENST00000551516 PPP1R15BQ5SWA1 713 aa4.63□□□□□ -1.67
CPSF6-207ENST00000551516 GPHNQ9NQX3 736 aaPredicted RBP4.63□□□□□ -1.67
CPSF6-207ENST00000551516 ARIH1Q9Y4X5 557 aaPredicted RBP4.63□□□□□ -1.67
CPSF6-207ENST00000551516 TESPA1A2RU30 521 aaPredicted RBP4.62□□□□□ -1.67
CPSF6-207ENST00000551516 ATN1P54259 1190 aaPredicted RBP4.62□□□□□ -1.67
CPSF6-207ENST00000551516 DPY19L2Q6NUT2 758 aa4.62□□□□□ -1.67
CPSF6-207ENST00000551516 TMC2Q8TDI7 906 aa4.62□□□□□ -1.67
CPSF6-207ENST00000551516 OCEL1Q9H607 264 aa4.62□□□□□ -1.67
CPSF6-207ENST00000551516 FANCD2Q9BXW9 1451 aa4.62□□□□□ -1.67
CPSF6-207ENST00000551516 KIF21AQ7Z4S6 1674 aa4.61□□□□□ -1.67
CPSF6-207ENST00000551516 ATMINO43313 823 aaPredicted RBP4.61□□□□□ -1.67
CPSF6-207ENST00000551516 EVX2Q03828 476 aa4.61□□□□□ -1.67
CPSF6-207ENST00000551516 IER5LQ5T953 404 aa4.61□□□□□ -1.67
CPSF6-207ENST00000551516 ZNF608Q9ULD9 1512 aaPredicted RBP4.61□□□□□ -1.67
CPSF6-207ENST00000551516 PLCG2P16885 1265 aa4.6□□□□□ -1.67
CPSF6-207ENST00000551516 ASTLQ6HA08 431 aaPredicted RBP4.6□□□□□ -1.67
CPSF6-207ENST00000551516 MICALL2Q8IY33 904 aa4.6□□□□□ -1.67
CPSF6-207ENST00000551516 L3MBTL3Q96JM7 780 aaPredicted RBP4.6□□□□□ -1.67
CPSF6-207ENST00000551516 BOLA1Q9Y3E2 137 aa4.6□□□□□ -1.67
CPSF6-207ENST00000551516 WIZO95785 1651 aa4.59□□□□□ -1.67
CPSF6-207ENST00000551516 IRX5P78411 483 aaPredicted RBP4.59□□□□□ -1.67
CPSF6-207ENST00000551516 FOXK1P85037 733 aa4.59□□□□□ -1.67
CPSF6-207ENST00000551516 PDCD7Q8N8D1 485 aaKnown RBP4.59□□□□□ -1.67
CPSF6-207ENST00000551516 ZC3H15Q8WU90 426 aaKnown RBP4.59□□□□□ -1.67
CPSF6-207ENST00000551516 SPDYE16A6NNV3 312 aaPredicted RBP4.58□□□□□ -1.68
CPSF6-207ENST00000551516 SEC24BO95487 1268 aa4.58□□□□□ -1.68
CPSF6-207ENST00000551516 DSG2Q14126 1118 aa4.58□□□□□ -1.68
CPSF6-207ENST00000551516 DCBLD2Q96PD2 775 aa4.58□□□□□ -1.68
CPSF6-207ENST00000551516 CEP164Q9UPV0 1460 aa4.57□□□□□ -1.68
CPSF6-207ENST00000551516 GABBR2O75899 941 aa4.57□□□□□ -1.68
CPSF6-207ENST00000551516 TMEM132AQ24JP5 1023 aa4.57□□□□□ -1.68
CPSF6-207ENST00000551516 PLPP6Q8IY26 295 aa4.57□□□□□ -1.68
CPSF6-207ENST00000551516 TMEM121BQ9BXQ6 578 aaPredicted RBP4.57□□□□□ -1.68
CPSF6-207ENST00000551516 DPYSL4O14531 572 aa4.56□□□□□ -1.68
CPSF6-207ENST00000551516 SP7Q8TDD2 431 aaPredicted RBP4.56□□□□□ -1.68
CPSF6-207ENST00000551516 SLC24A3Q9HC58 644 aa4.56□□□□□ -1.68
CPSF6-207ENST00000551516 EMILIN3Q9NT22 766 aa4.56□□□□□ -1.68
CPSF6-207ENST00000551516 ARHGEF11O15085 1522 aa4.56□□□□□ -1.68
CPSF6-207ENST00000551516 CCDC88BA6NC98 1476 aa4.56□□□□□ -1.68
CPSF6-207ENST00000551516 C2orf72A6NCS6 295 aa4.55□□□□□ -1.68
CPSF6-207ENST00000551516 MLLT3P42568 568 aaPredicted RBP4.55□□□□□ -1.68
CPSF6-207ENST00000551516 MAP3K9P80192 1104 aa4.55□□□□□ -1.68
CPSF6-207ENST00000551516 SLC39A7Q92504 469 aa4.55□□□□□ -1.68
CPSF6-207ENST00000551516 TOP2AP11388 1531 aaKnown RBP4.55□□□□□ -1.68
CPSF6-207ENST00000551516 ARAP1Q96P48 1450 aa4.55□□□□□ -1.68
CPSF6-207ENST00000551516 KIF3CO14782 793 aa4.54□□□□□ -1.68
CPSF6-207ENST00000551516 ZMYND10O75800 440 aa4.54□□□□□ -1.68
CPSF6-207ENST00000551516 PDIA6Q15084 440 aa4.54□□□□□ -1.68
CPSF6-207ENST00000551516 RBM26Q5T8P6 1007 aaKnown RBP4.54□□□□□ -1.68
CPSF6-207ENST00000551516 GPIHBP1Q8IV16 184 aa4.54□□□□□ -1.68
CPSF6-207ENST00000551516 KRI1Q8N9T8 703 aaKnown RBP4.54□□□□□ -1.68
CPSF6-207ENST00000551516 TOPBP1Q92547 1522 aa4.54□□□□□ -1.68
CPSF6-207ENST00000551516 IFT140Q96RY7 1462 aa4.54□□□□□ -1.68
CPSF6-207ENST00000551516 RIMBP3CA6NJZ7 1639 aa4.54□□□□□ -1.68
CPSF6-207ENST00000551516 RIMBP3BA6NNM3 1639 aa4.54□□□□□ -1.68
CPSF6-207ENST00000551516 RIMBP3Q9UFD9 1639 aa4.54□□□□□ -1.68
CPSF6-207ENST00000551516 TBC1D12O60347 775 aa4.53□□□□□ -1.68
CPSF6-207ENST00000551516 C7P10643 843 aa4.53□□□□□ -1.68
CPSF6-207ENST00000551516 NEUROD2Q15784 382 aa4.53□□□□□ -1.68
CPSF6-207ENST00000551516 BARGINQ6ZT62 677 aa4.53□□□□□ -1.68
CPSF6-207ENST00000551516 GTF3C3Q9Y5Q9 886 aa4.53□□□□□ -1.68
CPSF6-207ENST00000551516 AQRO60306 1485 aaKnown RBP eCLIP4.52□□□□□ -1.691e-6■■■■□ 22
CPSF6-207ENST00000551516 TARBP1Q13395 1621 aaKnown RBP4.52□□□□□ -1.69
CPSF6-207ENST00000551516 GRXCR2A6NFK2 248 aa4.51□□□□□ -1.69
CPSF6-207ENST00000551516 BRPF1P55201 1214 aaPredicted RBP4.51□□□□□ -1.69
CPSF6-207ENST00000551516 ERICH6Q7L0X2 663 aa4.51□□□□□ -1.69
CPSF6-207ENST00000551516 PELP1Q8IZL8 1130 aaKnown RBP4.51□□□□□ -1.69
CPSF6-207ENST00000551516 UPF1Q92900 1129 aaKnown RBP eCLIP4.51□□□□□ -1.69
CPSF6-207ENST00000551516 AK7Q96M32 723 aa4.51□□□□□ -1.69
CPSF6-207ENST00000551516 CYB5RLQ6IPT4 315 aa4.5□□□□□ -1.69
CPSF6-207ENST00000551516 C3orf67Q6ZVT6 689 aa4.5□□□□□ -1.69
CPSF6-207ENST00000551516 COLQQ9Y215 455 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms