RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 UACAQ9BZF9 1416 aa20.27■□□□□ 0.84
CALCOCO1-218ENST00000550804 MYT1Q01538 1121 aa20.27■□□□□ 0.84
CALCOCO1-218ENST00000550804 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
CALCOCO1-218ENST00000550804 ZNF644Q9H582 1327 aaPredicted RBP20.25■□□□□ 0.83
CALCOCO1-218ENST00000550804 PLEKHD1A6NEE1 506 aa20.24■□□□□ 0.83
CALCOCO1-218ENST00000550804 TONSLQ96HA7 1378 aa20.24■□□□□ 0.83
CALCOCO1-218ENST00000550804 KIF14Q15058 1648 aa20.21■□□□□ 0.83
CALCOCO1-218ENST00000550804 FOXD1Q16676 465 aa20.21■□□□□ 0.83
CALCOCO1-218ENST00000550804 ADCY10Q96PN6 1610 aa20.2■□□□□ 0.82
CALCOCO1-218ENST00000550804 GPATCH8Q9UKJ3 1502 aaKnown RBP20.19■□□□□ 0.82
CALCOCO1-218ENST00000550804 CFDP1Q9UEE9 299 aaPredicted RBP20.16■□□□□ 0.82
CALCOCO1-218ENST00000550804 MPHOSPH9Q99550 1183 aa20.15■□□□□ 0.82
CALCOCO1-218ENST00000550804 DENND4BO75064 1496 aaPredicted RBP20.14■□□□□ 0.81
CALCOCO1-218ENST00000550804 ABCC10Q5T3U5 1492 aa20.13■□□□□ 0.81
CALCOCO1-218ENST00000550804 KDM6BO15054 1643 aa20.13■□□□□ 0.81
CALCOCO1-218ENST00000550804 ABCC2Q92887 1545 aa20.12■□□□□ 0.81
CALCOCO1-218ENST00000550804 ABCC5O15440 1437 aa20.12■□□□□ 0.81
CALCOCO1-218ENST00000550804 DAPK1P53355 1430 aa20.12■□□□□ 0.81
CALCOCO1-218ENST00000550804 ITSN2Q9NZM3 1697 aa20.11■□□□□ 0.81
CALCOCO1-218ENST00000550804 AKNAQ7Z591 1439 aa20.09■□□□□ 0.81
CALCOCO1-218ENST00000550804 CAMSAP2Q08AD1 1489 aa20.09■□□□□ 0.81
CALCOCO1-218ENST00000550804 DNMT1P26358 1616 aaKnown RBP20.09■□□□□ 0.81
CALCOCO1-218ENST00000550804 ZNF777Q9ULD5 760 aaPredicted RBP20.09■□□□□ 0.81
CALCOCO1-218ENST00000550804 CDC42BPAQ5VT25 1732 aa20.06■□□□□ 0.8
CALCOCO1-218ENST00000550804 ROCK1Q13464 1354 aa20.05■□□□□ 0.8
CALCOCO1-218ENST00000550804 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
CALCOCO1-218ENST00000550804 L3MBTL2Q969R5 705 aa20.05■□□□□ 0.8
CALCOCO1-218ENST00000550804 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
CALCOCO1-218ENST00000550804 KDM5BQ9UGL1 1544 aa20.05■□□□□ 0.8
CALCOCO1-218ENST00000550804 GCC2Q8IWJ2 1684 aa20.04■□□□□ 0.8
CALCOCO1-218ENST00000550804 ANP32CO43423 234 aa20.01■□□□□ 0.79
CALCOCO1-218ENST00000550804 HSPA5P11021 654 aaKnown RBP20■□□□□ 0.79
CALCOCO1-218ENST00000550804 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
CALCOCO1-218ENST00000550804 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
CALCOCO1-218ENST00000550804 ZCCHC11Q5TAX3 1644 aaKnown RBP19.98■□□□□ 0.79
CALCOCO1-218ENST00000550804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.96■□□□□ 0.79
CALCOCO1-218ENST00000550804 NCOA1Q15788 1441 aa19.96■□□□□ 0.79
CALCOCO1-218ENST00000550804 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.78
CALCOCO1-218ENST00000550804 WASHC2AQ641Q2 1341 aa19.94■□□□□ 0.78
CALCOCO1-218ENST00000550804 CDC42BPBQ9Y5S2 1711 aa19.94■□□□□ 0.78
CALCOCO1-218ENST00000550804 NBPF8Q3BBV2 869 aa19.94■□□□□ 0.78
CALCOCO1-218ENST00000550804 TTC37Q6PGP7 1564 aa19.94■□□□□ 0.78
CALCOCO1-218ENST00000550804 HNRNPMP52272 730 aaKnown RBP eCLIP19.93■□□□□ 0.78
CALCOCO1-218ENST00000550804 PREX2Q70Z35 1606 aa19.93■□□□□ 0.78
CALCOCO1-218ENST00000550804 ADGRL2O95490 1459 aa19.93■□□□□ 0.78
CALCOCO1-218ENST00000550804 CROCC2H7BZ55 1655 aa19.92■□□□□ 0.78
CALCOCO1-218ENST00000550804 C11orf95C9JLR9 678 aaPredicted RBP19.92■□□□□ 0.78
CALCOCO1-218ENST00000550804 MBD5Q9P267 1494 aa19.91■□□□□ 0.78
CALCOCO1-218ENST00000550804 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
CALCOCO1-218ENST00000550804 EIF4G2P78344 907 aaKnown RBP eCLIP19.91■□□□□ 0.78
CALCOCO1-218ENST00000550804 SAMD9LQ8IVG5 1584 aa19.9■□□□□ 0.78
CALCOCO1-218ENST00000550804 ADGBQ8N7X0 1667 aa19.89■□□□□ 0.77
CALCOCO1-218ENST00000550804 ANKRD30AQ9BXX3 1397 aa19.89■□□□□ 0.77
CALCOCO1-218ENST00000550804 TSPY4P0CV99 314 aa19.88■□□□□ 0.77
CALCOCO1-218ENST00000550804 TSPY10P0CW01 314 aa19.88■□□□□ 0.77
CALCOCO1-218ENST00000550804 SHANK2Q9UPX8 1470 aa19.88■□□□□ 0.77
CALCOCO1-218ENST00000550804 C9orf84Q5VXU9 1444 aa19.87■□□□□ 0.77
CALCOCO1-218ENST00000550804 ARHGEF5Q12774 1597 aa19.87■□□□□ 0.77
CALCOCO1-218ENST00000550804 ARHGAP5Q13017 1502 aa19.86■□□□□ 0.77
CALCOCO1-218ENST00000550804 PLCH2O75038 1416 aa19.84■□□□□ 0.77
CALCOCO1-218ENST00000550804 RSPH4AQ5TD94 716 aa19.84■□□□□ 0.77
CALCOCO1-218ENST00000550804 MYO5CQ9NQX4 1742 aa19.84■□□□□ 0.77
CALCOCO1-218ENST00000550804 PKD2Q13563 968 aa19.83■□□□□ 0.77
CALCOCO1-218ENST00000550804 RPRD2Q5VT52 1461 aaKnown RBP19.82■□□□□ 0.76
CALCOCO1-218ENST00000550804 CCDC141Q6ZP82 1450 aa19.82■□□□□ 0.76
CALCOCO1-218ENST00000550804 ANKRD50Q9ULJ7 1429 aa19.81■□□□□ 0.76
CALCOCO1-218ENST00000550804 PZPP20742 1482 aa19.81■□□□□ 0.76
CALCOCO1-218ENST00000550804 SYCP2Q9BX26 1530 aa19.81■□□□□ 0.76
CALCOCO1-218ENST00000550804 WDR7Q9Y4E6 1490 aa19.8■□□□□ 0.76
CALCOCO1-218ENST00000550804 BCANQ96GW7 911 aa19.8■□□□□ 0.76
CALCOCO1-218ENST00000550804 KIAA1107Q9UPP5 1409 aa19.8■□□□□ 0.76
CALCOCO1-218ENST00000550804 ZNF326Q5BKZ1 582 aaKnown RBP19.79■□□□□ 0.76
CALCOCO1-218ENST00000550804 EFCAB2Q5VUJ9 269 aa19.79■□□□□ 0.76
CALCOCO1-218ENST00000550804 CCDC184Q52MB2 194 aa19.78■□□□□ 0.76
CALCOCO1-218ENST00000550804 PLEKHH2Q8IVE3 1493 aa19.77■□□□□ 0.76
CALCOCO1-218ENST00000550804 ARHGEF12Q9NZN5 1544 aa19.77■□□□□ 0.76
CALCOCO1-218ENST00000550804 KIF15Q9NS87 1388 aa19.77■□□□□ 0.76
CALCOCO1-218ENST00000550804 FKBP8Q14318 412 aa19.77■□□□□ 0.75
CALCOCO1-218ENST00000550804 TEX14Q8IWB6 1497 aa19.76■□□□□ 0.75
CALCOCO1-218ENST00000550804 ASXL2Q76L83 1435 aa19.75■□□□□ 0.75
CALCOCO1-218ENST00000550804 NUP155O75694 1391 aa19.74■□□□□ 0.75
CALCOCO1-218ENST00000550804 NPM1P06748 294 aaKnown RBP eCLIP19.72■□□□□ 0.75
CALCOCO1-218ENST00000550804 CCDC7Q96M83 1385 aa19.72■□□□□ 0.75
CALCOCO1-218ENST00000550804 MAST1Q9Y2H9 1570 aa19.72■□□□□ 0.75
CALCOCO1-218ENST00000550804 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
CALCOCO1-218ENST00000550804 HNRNPUQ00839 825 aaKnown RBP eCLIP19.71■□□□□ 0.75
CALCOCO1-218ENST00000550804 KIF7Q2M1P5 1343 aa19.7■□□□□ 0.74
CALCOCO1-218ENST00000550804 CNGB1Q14028 1251 aaPredicted RBP19.69■□□□□ 0.74
CALCOCO1-218ENST00000550804 SPATA31E1Q6ZUB1 1445 aa19.69■□□□□ 0.74
CALCOCO1-218ENST00000550804 ABCC1P33527 1531 aa19.69■□□□□ 0.74
CALCOCO1-218ENST00000550804 ABCA9Q8IUA7 1624 aa19.69■□□□□ 0.74
CALCOCO1-218ENST00000550804 TRAPPC8Q9Y2L5 1435 aa19.68■□□□□ 0.74
CALCOCO1-218ENST00000550804 POLR3GLQ9BT43 218 aa19.67■□□□□ 0.74
CALCOCO1-218ENST00000550804 PRKRIP1Q9H875 184 aaPredicted RBP19.67■□□□□ 0.74
CALCOCO1-218ENST00000550804 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
CALCOCO1-218ENST00000550804 CNTLNQ9NXG0 1405 aa19.65■□□□□ 0.74
CALCOCO1-218ENST00000550804 AFAP1Q8N556 730 aa19.64■□□□□ 0.73
CALCOCO1-218ENST00000550804 KDM5DQ9BY66 1539 aa19.64■□□□□ 0.73
CALCOCO1-218ENST00000550804 FANCAO15360 1455 aa19.63■□□□□ 0.73
CALCOCO1-218ENST00000550804 PLXNC1O60486 1568 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms