RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 SMG1Q96Q15 3661 aaKnown RBP1.22□□□□□ -2.21
CEP290-203ENST00000547691 MYO15BQ96JP2 1530 aa1.22□□□□□ -2.21
CEP290-203ENST00000547691 ZBTB22O15209 634 aa1.22□□□□□ -2.21
CEP290-203ENST00000547691 TRIM67Q6ZTA4 783 aa1.22□□□□□ -2.21
CEP290-203ENST00000547691 ANO8Q9HCE9 1232 aaPredicted RBP1.21□□□□□ -2.22
CEP290-203ENST00000547691 KRTAP5-9P26371 169 aa1.21□□□□□ -2.22
CEP290-203ENST00000547691 SEC24BO95487 1268 aa1.21□□□□□ -2.22
CEP290-203ENST00000547691 PRR29P0C7W0 189 aa1.21□□□□□ -2.22
CEP290-203ENST00000547691 SPENQ96T58 3664 aaKnown RBP1.21□□□□□ -2.22
CEP290-203ENST00000547691 LCE5AQ5TCM9 118 aa1.21□□□□□ -2.22
CEP290-203ENST00000547691 SRP68Q9UHB9 627 aaKnown RBP1.21□□□□□ -2.22
CEP290-203ENST00000547691 RB1CC1Q8TDY2 1594 aa1.2□□□□□ -2.22
CEP290-203ENST00000547691 ZRANB1Q9UGI0 708 aa1.2□□□□□ -2.22
CEP290-203ENST00000547691 BICRAQ9NZM4 1560 aa1.2□□□□□ -2.22
CEP290-203ENST00000547691 TK2O00142 265 aa1.2□□□□□ -2.22
CEP290-203ENST00000547691 NACADO15069 1562 aa1.2□□□□□ -2.22
CEP290-203ENST00000547691 TMEM79Q9BSE2 394 aa1.19□□□□□ -2.22
CEP290-203ENST00000547691 NFX1Q12986 1120 aaKnown RBP1.19□□□□□ -2.22
CEP290-203ENST00000547691 IRX2Q9BZI1 471 aaPredicted RBP1.19□□□□□ -2.22
CEP290-203ENST00000547691 DNAJC5Q9H3Z4 198 aa1.19□□□□□ -2.22
CEP290-203ENST00000547691 STAC3Q96MF2 364 aa1.19□□□□□ -2.22
CEP290-203ENST00000547691 FBLN2P98095 1184 aa1.19□□□□□ -2.22
CEP290-203ENST00000547691 LCE4AQ5TA78 99 aa1.19□□□□□ -2.22
CEP290-203ENST00000547691 CUX2O14529 1486 aa1.19□□□□□ -2.22
CEP290-203ENST00000547691 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
CEP290-203ENST00000547691 ABCC9O60706 1549 aa1.18□□□□□ -2.22
CEP290-203ENST00000547691 NUBP1P53384 320 aa1.18□□□□□ -2.22
CEP290-203ENST00000547691 KRTAP9-7A8MTY7 169 aa1.17□□□□□ -2.22
CEP290-203ENST00000547691 CSMD2Q7Z408 3487 aa1.17□□□□□ -2.22
CEP290-203ENST00000547691 CHRM1P11229 460 aaPredicted RBP1.17□□□□□ -2.22
CEP290-203ENST00000547691 TREML4Q6UXN2 200 aa1.17□□□□□ -2.22
CEP290-203ENST00000547691 SLAIN1Q8ND83 568 aa1.16□□□□□ -2.22
CEP290-203ENST00000547691 EMP3P54852 163 aa1.16□□□□□ -2.22
CEP290-203ENST00000547691 Q6ZNB5 142 aa1.16□□□□□ -2.22
CEP290-203ENST00000547691 CC2D2AQ9P2K1 1620 aa1.16□□□□□ -2.22
CEP290-203ENST00000547691 WDFY3Q8IZQ1 3526 aa1.16□□□□□ -2.22
CEP290-203ENST00000547691 G3V3G9 751 aa1.16□□□□□ -2.22
CEP290-203ENST00000547691 DCAF8Q5TAQ9 597 aa1.16□□□□□ -2.22
CEP290-203ENST00000547691 PCLOQ9Y6V0 5065 aa1.15□□□□□ -2.22
CEP290-203ENST00000547691 ITGB7P26010 798 aa1.15□□□□□ -2.22
CEP290-203ENST00000547691 CUBNO60494 3623 aa1.15□□□□□ -2.23
CEP290-203ENST00000547691 THOC2Q8NI27 1593 aaKnown RBP1.15□□□□□ -2.23
CEP290-203ENST00000547691 ONECUT2O95948 504 aa1.15□□□□□ -2.23
CEP290-203ENST00000547691 NPM1P06748 294 aaKnown RBP eCLIP1.15□□□□□ -2.23
CEP290-203ENST00000547691 DCAF1Q9Y4B6 1507 aa1.15□□□□□ -2.23
CEP290-203ENST00000547691 PLA2G2EQ9NZK7 142 aa1.15□□□□□ -2.23
CEP290-203ENST00000547691 MYT1LQ9UL68 1186 aa1.14□□□□□ -2.23
CEP290-203ENST00000547691 FAM181BA6NEQ2 426 aa1.14□□□□□ -2.23
CEP290-203ENST00000547691 EIF4G1Q04637 1599 aaKnown RBP1.14□□□□□ -2.23
CEP290-203ENST00000547691 UNC80Q8N2C7 3258 aa1.14□□□□□ -2.23
CEP290-203ENST00000547691 LAMA5O15230 3695 aa1.13□□□□□ -2.23
CEP290-203ENST00000547691 EIF2AK3Q9NZJ5 1116 aaKnown RBP1.13□□□□□ -2.23
CEP290-203ENST00000547691 EYSQ5T1H1 3165 aa1.13□□□□□ -2.23
CEP290-203ENST00000547691 A0A0C4DFX4 3053 aa1.13□□□□□ -2.23
CEP290-203ENST00000547691 ZNF692Q9BU19 519 aaPredicted RBP1.13□□□□□ -2.23
CEP290-203ENST00000547691 KCNMA1Q12791 1236 aa1.13□□□□□ -2.23
CEP290-203ENST00000547691 ZNF710Q8N1W2 664 aa1.13□□□□□ -2.23
CEP290-203ENST00000547691 ZNF775Q96BV0 537 aaPredicted RBP1.12□□□□□ -2.23
CEP290-203ENST00000547691 DMDP11532 3685 aa1.12□□□□□ -2.23
CEP290-203ENST00000547691 FAM205CA6NFA0 338 aa1.12□□□□□ -2.23
CEP290-203ENST00000547691 PLCG2P16885 1265 aa1.12□□□□□ -2.23
CEP290-203ENST00000547691 PBX2P40425 430 aa1.12□□□□□ -2.23
CEP290-203ENST00000547691 LSM11P83369 360 aaKnown RBP eCLIP1.12□□□□□ -2.23
CEP290-203ENST00000547691 KRTAP5-4Q6L8H1 288 aa1.12□□□□□ -2.23
CEP290-203ENST00000547691 ERBB3P21860 1342 aa1.12□□□□□ -2.23
CEP290-203ENST00000547691 VSIG8P0DPA2 414 aa1.12□□□□□ -2.23
CEP290-203ENST00000547691 CECR2Q9BXF3 1484 aa1.12□□□□□ -2.23
CEP290-203ENST00000547691 MAP3K13O43283 966 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 SMCPP49901 116 aaPredicted RBP1.11□□□□□ -2.23
CEP290-203ENST00000547691 AVPP01185 164 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 PLEKHG5O94827 1062 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 OCEL1Q9H607 264 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 CSMD3Q7Z407 3707 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 RIMBP2O15034 1052 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 ZNF787Q6DD87 383 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 C3orf67Q6ZVT6 689 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 HCSTQ9UBK5 93 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 CFAP54Q96N23 3096 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 MARVELD3Q96A59 401 aa1.11□□□□□ -2.23
CEP290-203ENST00000547691 HMGXB3Q12766 1538 aa1.1□□□□□ -2.23
CEP290-203ENST00000547691 PEG3Q9GZU2 1588 aa1.1□□□□□ -2.23
CEP290-203ENST00000547691 LAPTM4AQ15012 233 aa1.1□□□□□ -2.23
CEP290-203ENST00000547691 SMARCA2P51531 1590 aa1.1□□□□□ -2.23
CEP290-203ENST00000547691 ANKRD13DQ6ZTN6 518 aa1.1□□□□□ -2.23
CEP290-203ENST00000547691 WDR62O43379 1518 aa1.1□□□□□ -2.23
CEP290-203ENST00000547691 MUC3AQ02505 3323 aa1.1□□□□□ -2.23
CEP290-203ENST00000547691 PRDM2Q13029 1718 aa1.1□□□□□ -2.23
CEP290-203ENST00000547691 KRTAP5-11Q6L8G4 156 aa1.09□□□□□ -2.23
CEP290-203ENST00000547691 PRR20EP86478 221 aa1.09□□□□□ -2.23
CEP290-203ENST00000547691 PRR20CP86479 221 aa1.09□□□□□ -2.23
CEP290-203ENST00000547691 PRR20DP86480 221 aa1.09□□□□□ -2.23
CEP290-203ENST00000547691 PRR20BP86481 221 aa1.09□□□□□ -2.23
CEP290-203ENST00000547691 PRR20AP86496 221 aa1.09□□□□□ -2.23
CEP290-203ENST00000547691 GOLGA2Q08379 1002 aa1.09□□□□□ -2.23
CEP290-203ENST00000547691 BAZ1AQ9NRL2 1556 aaPredicted RBP1.09□□□□□ -2.23
CEP290-203ENST00000547691 LAMC3Q9Y6N6 1575 aa1.09□□□□□ -2.23
CEP290-203ENST00000547691 RIMBP3CA6NJZ7 1639 aa1.09□□□□□ -2.24
CEP290-203ENST00000547691 RIMBP3BA6NNM3 1639 aa1.09□□□□□ -2.24
CEP290-203ENST00000547691 RIMBP3Q9UFD9 1639 aa1.09□□□□□ -2.24
CEP290-203ENST00000547691 STAG3Q9UJ98 1225 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms