RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 CROCC2H7BZ55 1655 aa22.36■■□□□ 1.17
CALCOCO1-203ENST00000546443 KDM6BO15054 1643 aa22.35■■□□□ 1.17
CALCOCO1-203ENST00000546443 CFDP1Q9UEE9 299 aaPredicted RBP22.35■■□□□ 1.17
CALCOCO1-203ENST00000546443 ADGBQ8N7X0 1667 aa22.33■■□□□ 1.17
CALCOCO1-203ENST00000546443 CHIC2Q9UKJ5 165 aa22.33■■□□□ 1.17
CALCOCO1-203ENST00000546443 ZNF316A6NFI3 1004 aaPredicted RBP22.32■■□□□ 1.16
CALCOCO1-203ENST00000546443 RRP7BPQ9NSQ0 103 aa22.32■■□□□ 1.16
CALCOCO1-203ENST00000546443 ZCCHC11Q5TAX3 1644 aaKnown RBP22.32■■□□□ 1.16
CALCOCO1-203ENST00000546443 PREX2Q70Z35 1606 aa22.3■■□□□ 1.16
CALCOCO1-203ENST00000546443 CDC42BPBQ9Y5S2 1711 aa22.3■■□□□ 1.16
CALCOCO1-203ENST00000546443 KDM5BQ9UGL1 1544 aa22.29■■□□□ 1.16
CALCOCO1-203ENST00000546443 ADGRL2O95490 1459 aa22.27■■□□□ 1.16
CALCOCO1-203ENST00000546443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.25■■□□□ 1.15
CALCOCO1-203ENST00000546443 TTC37Q6PGP7 1564 aa22.25■■□□□ 1.15
CALCOCO1-203ENST00000546443 ARHGEF5Q12774 1597 aa22.23■■□□□ 1.15
CALCOCO1-203ENST00000546443 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
CALCOCO1-203ENST00000546443 SIN3AQ96ST3 1273 aa22.22■■□□□ 1.15
CALCOCO1-203ENST00000546443 SAMD9LQ8IVG5 1584 aa22.22■■□□□ 1.15
CALCOCO1-203ENST00000546443 DENND4BO75064 1496 aaPredicted RBP22.22■■□□□ 1.15
CALCOCO1-203ENST00000546443 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
CALCOCO1-203ENST00000546443 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
CALCOCO1-203ENST00000546443 MYO5CQ9NQX4 1742 aa22.21■■□□□ 1.15
CALCOCO1-203ENST00000546443 NCOA1Q15788 1441 aa22.2■■□□□ 1.14
CALCOCO1-203ENST00000546443 TIMELESSQ9UNS1 1208 aa22.2■■□□□ 1.14
CALCOCO1-203ENST00000546443 MBD5Q9P267 1494 aa22.17■■□□□ 1.14
CALCOCO1-203ENST00000546443 DIEXFQ68CQ4 756 aaKnown RBP22.16■■□□□ 1.14
CALCOCO1-203ENST00000546443 OSCARQ8IYS5 282 aa22.16■■□□□ 1.14
CALCOCO1-203ENST00000546443 ANKRD30AQ9BXX3 1397 aa22.13■■□□□ 1.13
CALCOCO1-203ENST00000546443 NEUROD1Q13562 356 aa22.13■■□□□ 1.13
CALCOCO1-203ENST00000546443 C9orf84Q5VXU9 1444 aa22.12■■□□□ 1.13
CALCOCO1-203ENST00000546443 ARHGAP5Q13017 1502 aa22.12■■□□□ 1.13
CALCOCO1-203ENST00000546443 TRIM52Q96A61 297 aa22.11■■□□□ 1.13
CALCOCO1-203ENST00000546443 CCDC141Q6ZP82 1450 aa22.1■■□□□ 1.13
CALCOCO1-203ENST00000546443 MAST1Q9Y2H9 1570 aa22.1■■□□□ 1.13
CALCOCO1-203ENST00000546443 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
CALCOCO1-203ENST00000546443 PLCH2O75038 1416 aa22.08■■□□□ 1.12
CALCOCO1-203ENST00000546443 SYCP2Q9BX26 1530 aa22.07■■□□□ 1.12
CALCOCO1-203ENST00000546443 HNRNPMP52272 730 aaKnown RBP eCLIP22.07■■□□□ 1.12
CALCOCO1-203ENST00000546443 PLEKHH2Q8IVE3 1493 aa22.06■■□□□ 1.12
CALCOCO1-203ENST00000546443 RSPH4AQ5TD94 716 aa22.06■■□□□ 1.12
CALCOCO1-203ENST00000546443 KIAA1107Q9UPP5 1409 aa22.06■■□□□ 1.12
CALCOCO1-203ENST00000546443 PZPP20742 1482 aa22.06■■□□□ 1.12
CALCOCO1-203ENST00000546443 PPP1R15AO75807 674 aaPredicted RBP22.05■■□□□ 1.12
CALCOCO1-203ENST00000546443 KCNH8Q96L42 1107 aa22.05■■□□□ 1.12
CALCOCO1-203ENST00000546443 ARAP3Q8WWN8 1544 aa22.05■■□□□ 1.12
CALCOCO1-203ENST00000546443 WDR7Q9Y4E6 1490 aa22.04■■□□□ 1.12
CALCOCO1-203ENST00000546443 ANKRD50Q9ULJ7 1429 aa22.04■■□□□ 1.12
CALCOCO1-203ENST00000546443 TSPY4P0CV99 314 aa22.03■■□□□ 1.12
CALCOCO1-203ENST00000546443 TSPY10P0CW01 314 aa22.03■■□□□ 1.12
CALCOCO1-203ENST00000546443 TONSLQ96HA7 1378 aa22.02■■□□□ 1.12
CALCOCO1-203ENST00000546443 ABCC1P33527 1531 aa22■■□□□ 1.11
CALCOCO1-203ENST00000546443 KDM5DQ9BY66 1539 aa22■■□□□ 1.11
CALCOCO1-203ENST00000546443 ARHGEF12Q9NZN5 1544 aa22■■□□□ 1.11
CALCOCO1-203ENST00000546443 ABCA9Q8IUA7 1624 aa22■■□□□ 1.11
CALCOCO1-203ENST00000546443 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
CALCOCO1-203ENST00000546443 PLXNC1O60486 1568 aa21.98■■□□□ 1.11
CALCOCO1-203ENST00000546443 KIF15Q9NS87 1388 aa21.98■■□□□ 1.11
CALCOCO1-203ENST00000546443 EFCAB2Q5VUJ9 269 aa21.96■■□□□ 1.11
CALCOCO1-203ENST00000546443 ASXL2Q76L83 1435 aa21.94■■□□□ 1.1
CALCOCO1-203ENST00000546443 SLC4A1APQ9BWU0 796 aaKnown RBP21.94■■□□□ 1.1
CALCOCO1-203ENST00000546443 FOXD1Q16676 465 aa21.92■■□□□ 1.1
CALCOCO1-203ENST00000546443 RPRD2Q5VT52 1461 aaKnown RBP21.92■■□□□ 1.1
CALCOCO1-203ENST00000546443 UNC13BO14795 1591 aa21.89■■□□□ 1.09
CALCOCO1-203ENST00000546443 TRAPPC8Q9Y2L5 1435 aa21.87■■□□□ 1.09
CALCOCO1-203ENST00000546443 DUOX2Q9NRD8 1548 aa21.86■■□□□ 1.09
CALCOCO1-203ENST00000546443 TEX14Q8IWB6 1497 aa21.85■■□□□ 1.09
CALCOCO1-203ENST00000546443 NUP155O75694 1391 aa21.85■■□□□ 1.09
CALCOCO1-203ENST00000546443 FANCAO15360 1455 aa21.83■■□□□ 1.08
CALCOCO1-203ENST00000546443 PKD2Q13563 968 aa21.82■■□□□ 1.08
CALCOCO1-203ENST00000546443 RTEL1-TNFRSF6BF6WH68 1400 aa21.81■■□□□ 1.08
CALCOCO1-203ENST00000546443 NPM1P06748 294 aaKnown RBP eCLIP21.81■■□□□ 1.08
CALCOCO1-203ENST00000546443 FAM135AQ9P2D6 1515 aa21.8■■□□□ 1.08
CALCOCO1-203ENST00000546443 ERBINQ96RT1 1412 aa21.8■■□□□ 1.08
CALCOCO1-203ENST00000546443 L3MBTL2Q969R5 705 aa21.8■■□□□ 1.08
CALCOCO1-203ENST00000546443 ZFYVE16Q7Z3T8 1539 aa21.8■■□□□ 1.08
CALCOCO1-203ENST00000546443 IQGAP3Q86VI3 1631 aa21.79■■□□□ 1.08
CALCOCO1-203ENST00000546443 MIER1Q8N108 512 aa21.79■■□□□ 1.08
CALCOCO1-203ENST00000546443 MAGI2Q86UL8 1455 aa21.78■■□□□ 1.08
CALCOCO1-203ENST00000546443 INO80Q9ULG1 1556 aaPredicted RBP21.78■■□□□ 1.08
CALCOCO1-203ENST00000546443 ADGRL1O94910 1474 aa21.75■■□□□ 1.07
CALCOCO1-203ENST00000546443 CFAP74Q9C0B2 1584 aa21.75■■□□□ 1.07
CALCOCO1-203ENST00000546443 RIMBP3CA6NJZ7 1639 aa21.74■■□□□ 1.07
CALCOCO1-203ENST00000546443 RIMBP3BA6NNM3 1639 aa21.74■■□□□ 1.07
CALCOCO1-203ENST00000546443 RIMBP3Q9UFD9 1639 aa21.74■■□□□ 1.07
CALCOCO1-203ENST00000546443 SPAG9O60271 1321 aaKnown RBP21.73■■□□□ 1.07
CALCOCO1-203ENST00000546443 ATP7AQ04656 1500 aa21.73■■□□□ 1.07
CALCOCO1-203ENST00000546443 SCAPERQ9BY12 1400 aa21.72■■□□□ 1.07
CALCOCO1-203ENST00000546443 AFAP1Q8N556 730 aa21.71■■□□□ 1.07
CALCOCO1-203ENST00000546443 CD109Q6YHK3 1445 aa21.69■■□□□ 1.06
CALCOCO1-203ENST00000546443 DEPDC5O75140 1603 aa21.68■■□□□ 1.06
CALCOCO1-203ENST00000546443 NBPF8Q3BBV2 869 aa21.67■■□□□ 1.06
CALCOCO1-203ENST00000546443 KIDINS220Q9ULH0 1771 aa21.66■■□□□ 1.06
CALCOCO1-203ENST00000546443 EIF2AK4Q9P2K8 1649 aaKnown RBP21.65■■□□□ 1.06
CALCOCO1-203ENST00000546443 HIRIP3Q9BW71 556 aaPredicted RBP21.64■■□□□ 1.05
CALCOCO1-203ENST00000546443 KDM5CP41229 1560 aa21.62■■□□□ 1.05
CALCOCO1-203ENST00000546443 PLA2R1Q13018 1463 aa21.62■■□□□ 1.05
CALCOCO1-203ENST00000546443 ZNF518AQ6AHZ1 1483 aa21.62■■□□□ 1.05
CALCOCO1-203ENST00000546443 MAP3K4Q9Y6R4 1608 aa21.61■■□□□ 1.05
CALCOCO1-203ENST00000546443 UHRF1BP1Q6BDS2 1440 aa21.61■■□□□ 1.05
CALCOCO1-203ENST00000546443 ATP10AO60312 1499 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms