RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 IER5LQ5T953 404 aa13.87□□□□□ -0.19
LEMD3-206ENST00000545026 OCEL1Q9H607 264 aa13.86□□□□□ -0.19
LEMD3-206ENST00000545026 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
LEMD3-206ENST00000545026 PPP1R15BQ5SWA1 713 aa13.85□□□□□ -0.19
LEMD3-206ENST00000545026 GABBR2O75899 941 aa13.83□□□□□ -0.2
LEMD3-206ENST00000545026 TMEM121BQ9BXQ6 578 aaPredicted RBP13.83□□□□□ -0.2
LEMD3-206ENST00000545026 DSG2Q14126 1118 aa13.79□□□□□ -0.2
LEMD3-206ENST00000545026 BOLA1Q9Y3E2 137 aa13.79□□□□□ -0.2
LEMD3-206ENST00000545026 TMC2Q8TDI7 906 aa13.77□□□□□ -0.21
LEMD3-206ENST00000545026 PLCG2P16885 1265 aa13.76□□□□□ -0.21
LEMD3-206ENST00000545026 FOXK1P85037 733 aa13.76□□□□□ -0.21
LEMD3-206ENST00000545026 EMILIN3Q9NT22 766 aa13.76□□□□□ -0.21
LEMD3-206ENST00000545026 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
LEMD3-206ENST00000545026 ZC3H15Q8WU90 426 aaKnown RBP13.74□□□□□ -0.21
LEMD3-206ENST00000545026 SMYD5Q6GMV2 418 aa13.73□□□□□ -0.21
LEMD3-206ENST00000545026 KIF3CO14782 793 aa13.72□□□□□ -0.21
LEMD3-206ENST00000545026 C2orf72A6NCS6 295 aa13.71□□□□□ -0.21
LEMD3-206ENST00000545026 G3V3G9 751 aa13.7□□□□□ -0.22
LEMD3-206ENST00000545026 DPYSL4O14531 572 aa13.7□□□□□ -0.22
LEMD3-206ENST00000545026 L3MBTL3Q96JM7 780 aaPredicted RBP13.7□□□□□ -0.22
LEMD3-206ENST00000545026 DCBLD2Q96PD2 775 aa13.7□□□□□ -0.22
LEMD3-206ENST00000545026 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
LEMD3-206ENST00000545026 PLPP6Q8IY26 295 aa13.69□□□□□ -0.22
LEMD3-206ENST00000545026 MLLT3P42568 568 aaPredicted RBP13.67□□□□□ -0.22
LEMD3-206ENST00000545026 SPDYE16A6NNV3 312 aaPredicted RBP13.65□□□□□ -0.22
LEMD3-206ENST00000545026 SEC24BO95487 1268 aa13.65□□□□□ -0.22
LEMD3-206ENST00000545026 PDIA6Q15084 440 aa13.65□□□□□ -0.22
LEMD3-206ENST00000545026 POTEFA5A3E0 1075 aa13.64□□□□□ -0.23
LEMD3-206ENST00000545026 TMEM92Q6UXU6 159 aa13.64□□□□□ -0.23
LEMD3-206ENST00000545026 SLC39A7Q92504 469 aa13.64□□□□□ -0.23
LEMD3-206ENST00000545026 C7P10643 843 aa13.61□□□□□ -0.23
LEMD3-206ENST00000545026 ZMYND10O75800 440 aa13.6□□□□□ -0.23
LEMD3-206ENST00000545026 RBM26Q5T8P6 1007 aaKnown RBP13.59□□□□□ -0.23
LEMD3-206ENST00000545026 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
LEMD3-206ENST00000545026 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
LEMD3-206ENST00000545026 METRNQ9UJH8 293 aa13.56□□□□□ -0.24
LEMD3-206ENST00000545026 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
LEMD3-206ENST00000545026 MAP3K9P80192 1104 aa13.53□□□□□ -0.24
LEMD3-206ENST00000545026 OXER1Q8TDS5 423 aa13.53□□□□□ -0.24
LEMD3-206ENST00000545026 BRPF1P55201 1214 aaPredicted RBP13.52□□□□□ -0.25
LEMD3-206ENST00000545026 GPIHBP1Q8IV16 184 aa13.52□□□□□ -0.25
LEMD3-206ENST00000545026 UPF1Q92900 1129 aaKnown RBP eCLIP13.51□□□□□ -0.25
LEMD3-206ENST00000545026 TMEM132AQ24JP5 1023 aa13.48□□□□□ -0.25
LEMD3-206ENST00000545026 C3orf67Q6ZVT6 689 aa13.46□□□□□ -0.25
LEMD3-206ENST00000545026 SP7Q8TDD2 431 aaPredicted RBP13.46□□□□□ -0.25
LEMD3-206ENST00000545026 GRXCR2A6NFK2 248 aa13.44□□□□□ -0.26
LEMD3-206ENST00000545026 PTGER2P43116 358 aa13.44□□□□□ -0.26
LEMD3-206ENST00000545026 GPR37O15354 613 aa13.42□□□□□ -0.26
LEMD3-206ENST00000545026 TBC1D12O60347 775 aa13.41□□□□□ -0.26
LEMD3-206ENST00000545026 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
LEMD3-206ENST00000545026 PTCD2Q8WV60 388 aaKnown RBP13.41□□□□□ -0.26
LEMD3-206ENST00000545026 OSBPP22059 807 aa13.4□□□□□ -0.26
LEMD3-206ENST00000545026 AK7Q96M32 723 aa13.4□□□□□ -0.26
LEMD3-206ENST00000545026 EVI5O60447 810 aa13.39□□□□□ -0.27
LEMD3-206ENST00000545026 SLC34A2O95436 690 aa13.38□□□□□ -0.27
LEMD3-206ENST00000545026 KRI1Q8N9T8 703 aaKnown RBP13.38□□□□□ -0.27
LEMD3-206ENST00000545026 DDX12PQ92771 950 aa13.37□□□□□ -0.27
LEMD3-206ENST00000545026 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
LEMD3-206ENST00000545026 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.35□□□□□ -0.27
LEMD3-206ENST00000545026 NUTM2FA1L443 756 aa13.34□□□□□ -0.27
LEMD3-206ENST00000545026 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
LEMD3-206ENST00000545026 PRIM1P49642 420 aaKnown RBP13.32□□□□□ -0.28
LEMD3-206ENST00000545026 TRIM66O15016 1216 aa13.3□□□□□ -0.28
LEMD3-206ENST00000545026 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
LEMD3-206ENST00000545026 FCHSD2O94868 740 aa13.26□□□□□ -0.29
LEMD3-206ENST00000545026 MINK1Q8N4C8 1332 aaPredicted RBP13.26□□□□□ -0.29
LEMD3-206ENST00000545026 GNPATO15228 680 aa13.25□□□□□ -0.29
LEMD3-206ENST00000545026 GPBP1L1Q9HC44 474 aaPredicted RBP13.25□□□□□ -0.29
LEMD3-206ENST00000545026 PCDHGA4Q9Y5G9 962 aa13.25□□□□□ -0.29
LEMD3-206ENST00000545026 PDE4DQ08499 809 aa13.24□□□□□ -0.29
LEMD3-206ENST00000545026 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
LEMD3-206ENST00000545026 HIC1Q14526 733 aa13.24□□□□□ -0.29
LEMD3-206ENST00000545026 IRF6O14896 467 aa13.22□□□□□ -0.29
LEMD3-206ENST00000545026 PHF14O94880 888 aa13.22□□□□□ -0.29
LEMD3-206ENST00000545026 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
LEMD3-206ENST00000545026 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
LEMD3-206ENST00000545026 FECHP22830 423 aa13.21□□□□□ -0.29
LEMD3-206ENST00000545026 PTGDRQ13258 359 aa13.21□□□□□ -0.29
LEMD3-206ENST00000545026 EPAS1Q99814 870 aa13.21□□□□□ -0.29
LEMD3-206ENST00000545026 CCDC102AQ96A19 550 aa13.2□□□□□ -0.3
LEMD3-206ENST00000545026 KDM4CQ9H3R0 1056 aa13.19□□□□□ -0.3
LEMD3-206ENST00000545026 TIMELESSQ9UNS1 1208 aa13.19□□□□□ -0.3
LEMD3-206ENST00000545026 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
LEMD3-206ENST00000545026 PCDHGA10Q9Y5H3 936 aa13.18□□□□□ -0.3
LEMD3-206ENST00000545026 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
LEMD3-206ENST00000545026 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
LEMD3-206ENST00000545026 CDHR5Q9HBB8 845 aa13.15□□□□□ -0.3
LEMD3-206ENST00000545026 TYW1BQ6NUM6 668 aa13.14□□□□□ -0.31
LEMD3-206ENST00000545026 SLAIN1Q8ND83 568 aa13.14□□□□□ -0.31
LEMD3-206ENST00000545026 MAP3K7O43318 606 aa13.13□□□□□ -0.31
LEMD3-206ENST00000545026 AMHR2Q16671 573 aa13.13□□□□□ -0.31
LEMD3-206ENST00000545026 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
LEMD3-206ENST00000545026 HOXB3P14651 431 aaPredicted RBP13.12□□□□□ -0.31
LEMD3-206ENST00000545026 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
LEMD3-206ENST00000545026 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
LEMD3-206ENST00000545026 FOSBP53539 338 aa13.1□□□□□ -0.31
LEMD3-206ENST00000545026 TSR1Q2NL82 804 aaKnown RBP13.1□□□□□ -0.31
LEMD3-206ENST00000545026 FBXW7Q969H0 707 aa13.1□□□□□ -0.31
LEMD3-206ENST00000545026 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
LEMD3-206ENST00000545026 DAXXQ9UER7 740 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms