RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 TROQ12816 1431 aaPredicted RBP25.96■■□□□ 1.75
TNFAIP1-202ENST00000544907 SIN3AQ96ST3 1273 aa25.95■■□□□ 1.74
TNFAIP1-202ENST00000544907 PPP1R15AO75807 674 aaPredicted RBP25.93■■□□□ 1.74
TNFAIP1-202ENST00000544907 DNMT1P26358 1616 aaKnown RBP25.9■■□□□ 1.74
TNFAIP1-202ENST00000544907 NPM1P06748 294 aaKnown RBP eCLIP25.9■■□□□ 1.74
TNFAIP1-202ENST00000544907 KDM5BQ9UGL1 1544 aa25.9■■□□□ 1.74
TNFAIP1-202ENST00000544907 ZCCHC11Q5TAX3 1644 aaKnown RBP25.89■■□□□ 1.74
TNFAIP1-202ENST00000544907 DAPK1P53355 1430 aa25.88■■□□□ 1.73
TNFAIP1-202ENST00000544907 TONSLQ96HA7 1378 aa25.86■■□□□ 1.73
TNFAIP1-202ENST00000544907 ITSN2Q9NZM3 1697 aa25.86■■□□□ 1.73
TNFAIP1-202ENST00000544907 ARID3CA6NKF2 412 aa25.83■■□□□ 1.73
TNFAIP1-202ENST00000544907 ABCC5O15440 1437 aa25.83■■□□□ 1.72
TNFAIP1-202ENST00000544907 ATP10BO94823 1461 aa25.81■■□□□ 1.72
TNFAIP1-202ENST00000544907 RRP7BPQ9NSQ0 103 aa25.78■■□□□ 1.72
TNFAIP1-202ENST00000544907 GPATCH8Q9UKJ3 1502 aaKnown RBP25.77■■□□□ 1.72
TNFAIP1-202ENST00000544907 DENND4BO75064 1496 aaPredicted RBP25.76■■□□□ 1.71
TNFAIP1-202ENST00000544907 ASXL2Q76L83 1435 aa25.74■■□□□ 1.71
TNFAIP1-202ENST00000544907 ADGRL2O95490 1459 aa25.73■■□□□ 1.71
TNFAIP1-202ENST00000544907 CAMSAP2Q08AD1 1489 aa25.73■■□□□ 1.71
TNFAIP1-202ENST00000544907 CHIC2Q9UKJ5 165 aa25.73■■□□□ 1.71
TNFAIP1-202ENST00000544907 KDM6BO15054 1643 aa25.72■■□□□ 1.71
TNFAIP1-202ENST00000544907 GTF3C3Q9Y5Q9 886 aa25.71■■□□□ 1.71
TNFAIP1-202ENST00000544907 WDR7Q9Y4E6 1490 aa25.69■■□□□ 1.7
TNFAIP1-202ENST00000544907 MPHOSPH9Q99550 1183 aa25.69■■□□□ 1.7
TNFAIP1-202ENST00000544907 CFDP1Q9UEE9 299 aaPredicted RBP25.69■■□□□ 1.7
TNFAIP1-202ENST00000544907 KIF14Q15058 1648 aa25.69■■□□□ 1.7
TNFAIP1-202ENST00000544907 ABCC10Q5T3U5 1492 aa25.67■■□□□ 1.7
TNFAIP1-202ENST00000544907 ADGBQ8N7X0 1667 aa25.67■■□□□ 1.7
TNFAIP1-202ENST00000544907 YTHDC1Q96MU7 727 aaKnown RBP25.67■■□□□ 1.7
TNFAIP1-202ENST00000544907 PLEKHD1A6NEE1 506 aa25.66■■□□□ 1.7
TNFAIP1-202ENST00000544907 SHANK2Q9UPX8 1470 aa25.65■■□□□ 1.7
TNFAIP1-202ENST00000544907 CROCC2H7BZ55 1655 aa25.65■■□□□ 1.7
TNFAIP1-202ENST00000544907 NCOA1Q15788 1441 aa25.65■■□□□ 1.7
TNFAIP1-202ENST00000544907 TRIM52Q96A61 297 aa25.64■■□□□ 1.7
TNFAIP1-202ENST00000544907 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
TNFAIP1-202ENST00000544907 DIP2BQ9P265 1576 aa25.62■■□□□ 1.69
TNFAIP1-202ENST00000544907 ANKRD30BQ9BXX2 1392 aa25.6■■□□□ 1.69
TNFAIP1-202ENST00000544907 RPRD2Q5VT52 1461 aaKnown RBP25.58■■□□□ 1.69
TNFAIP1-202ENST00000544907 ANKRD30AQ9BXX3 1397 aa25.58■■□□□ 1.69
TNFAIP1-202ENST00000544907 KIF13AQ9H1H9 1805 aa25.58■■□□□ 1.69
TNFAIP1-202ENST00000544907 CDC42BPAQ5VT25 1732 aa25.57■■□□□ 1.68
TNFAIP1-202ENST00000544907 KCNH8Q96L42 1107 aa25.55■■□□□ 1.68
TNFAIP1-202ENST00000544907 TRHP20396 242 aaPredicted RBP25.55■■□□□ 1.68
TNFAIP1-202ENST00000544907 ARHGEF5Q12774 1597 aa25.54■■□□□ 1.68
TNFAIP1-202ENST00000544907 GLI2P10070 1586 aa25.53■■□□□ 1.68
TNFAIP1-202ENST00000544907 FAM69CQ0P6D2 419 aa25.52■■□□□ 1.68
TNFAIP1-202ENST00000544907 PZPP20742 1482 aa25.51■■□□□ 1.67
TNFAIP1-202ENST00000544907 DDX10Q13206 875 aaKnown RBP25.51■■□□□ 1.67
TNFAIP1-202ENST00000544907 CCER2I3L3R5 266 aa25.49■■□□□ 1.67
TNFAIP1-202ENST00000544907 ABCA9Q8IUA7 1624 aa25.48■■□□□ 1.67
TNFAIP1-202ENST00000544907 TEX14Q8IWB6 1497 aa25.47■■□□□ 1.67
TNFAIP1-202ENST00000544907 RSPH4AQ5TD94 716 aa25.47■■□□□ 1.67
TNFAIP1-202ENST00000544907 SLC4A1APQ9BWU0 796 aaKnown RBP25.46■■□□□ 1.67
TNFAIP1-202ENST00000544907 MAP3K4Q9Y6R4 1608 aa25.46■■□□□ 1.67
TNFAIP1-202ENST00000544907 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.46■■□□□ 1.67
TNFAIP1-202ENST00000544907 C9orf84Q5VXU9 1444 aa25.45■■□□□ 1.66
TNFAIP1-202ENST00000544907 ANKRD50Q9ULJ7 1429 aa25.45■■□□□ 1.66
TNFAIP1-202ENST00000544907 KDM5DQ9BY66 1539 aa25.45■■□□□ 1.66
TNFAIP1-202ENST00000544907 TTC37Q6PGP7 1564 aa25.45■■□□□ 1.66
TNFAIP1-202ENST00000544907 PELP1Q8IZL8 1130 aaKnown RBP25.44■■□□□ 1.66
TNFAIP1-202ENST00000544907 KIAA1107Q9UPP5 1409 aa25.44■■□□□ 1.66
TNFAIP1-202ENST00000544907 PREX2Q70Z35 1606 aa25.44■■□□□ 1.66
TNFAIP1-202ENST00000544907 L3MBTL2Q969R5 705 aa25.42■■□□□ 1.66
TNFAIP1-202ENST00000544907 MBD5Q9P267 1494 aa25.42■■□□□ 1.66
TNFAIP1-202ENST00000544907 ZNF777Q9ULD5 760 aaPredicted RBP25.41■■□□□ 1.66
TNFAIP1-202ENST00000544907 TSPOAP1O95153 1857 aa25.4■■□□□ 1.66
TNFAIP1-202ENST00000544907 ANP32CO43423 234 aa25.39■■□□□ 1.66
TNFAIP1-202ENST00000544907 CD109Q6YHK3 1445 aa25.39■■□□□ 1.66
TNFAIP1-202ENST00000544907 EIF4G2P78344 907 aaKnown RBP eCLIP25.39■■□□□ 1.65
TNFAIP1-202ENST00000544907 TSPY4P0CV99 314 aa25.38■■□□□ 1.65
TNFAIP1-202ENST00000544907 TSPY10P0CW01 314 aa25.38■■□□□ 1.65
TNFAIP1-202ENST00000544907 MYO5CQ9NQX4 1742 aa25.37■■□□□ 1.65
TNFAIP1-202ENST00000544907 CCDC141Q6ZP82 1450 aa25.37■■□□□ 1.65
TNFAIP1-202ENST00000544907 MAST1Q9Y2H9 1570 aa25.34■■□□□ 1.65
TNFAIP1-202ENST00000544907 PPRC1Q5VV67 1664 aaKnown RBP25.34■■□□□ 1.65
TNFAIP1-202ENST00000544907 PLEKHH2Q8IVE3 1493 aa25.34■■□□□ 1.65
TNFAIP1-202ENST00000544907 SAMD9LQ8IVG5 1584 aa25.34■■□□□ 1.65
TNFAIP1-202ENST00000544907 CDC42BPBQ9Y5S2 1711 aa25.33■■□□□ 1.65
TNFAIP1-202ENST00000544907 HSPA5P11021 654 aaKnown RBP25.32■■□□□ 1.64
TNFAIP1-202ENST00000544907 FOXD1Q16676 465 aa25.32■■□□□ 1.64
TNFAIP1-202ENST00000544907 HIRIP3Q9BW71 556 aaPredicted RBP25.32■■□□□ 1.64
TNFAIP1-202ENST00000544907 KIF15Q9NS87 1388 aa25.3■■□□□ 1.64
TNFAIP1-202ENST00000544907 PLCH2O75038 1416 aa25.28■■□□□ 1.64
TNFAIP1-202ENST00000544907 ARAP3Q8WWN8 1544 aa25.28■■□□□ 1.64
TNFAIP1-202ENST00000544907 SPATA31E1Q6ZUB1 1445 aa25.27■■□□□ 1.64
TNFAIP1-202ENST00000544907 ARHGAP5Q13017 1502 aa25.26■■□□□ 1.63
TNFAIP1-202ENST00000544907 CFAP74Q9C0B2 1584 aa25.26■■□□□ 1.63
TNFAIP1-202ENST00000544907 WASHC2AQ641Q2 1341 aa25.26■■□□□ 1.63
TNFAIP1-202ENST00000544907 ARHGEF12Q9NZN5 1544 aa25.25■■□□□ 1.63
TNFAIP1-202ENST00000544907 PKD2Q13563 968 aa25.25■■□□□ 1.63
TNFAIP1-202ENST00000544907 NUP155O75694 1391 aa25.25■■□□□ 1.63
TNFAIP1-202ENST00000544907 FANCAO15360 1455 aa25.24■■□□□ 1.63
TNFAIP1-202ENST00000544907 UHRF1BP1Q6BDS2 1440 aa25.23■■□□□ 1.63
TNFAIP1-202ENST00000544907 NBPF8Q3BBV2 869 aa25.23■■□□□ 1.63
TNFAIP1-202ENST00000544907 PLXNC1O60486 1568 aa25.22■■□□□ 1.63
TNFAIP1-202ENST00000544907 HNRNPMP52272 730 aaKnown RBP eCLIP25.21■■□□□ 1.63
TNFAIP1-202ENST00000544907 NEO1Q92859 1461 aa25.21■■□□□ 1.63
TNFAIP1-202ENST00000544907 CNTLNQ9NXG0 1405 aa25.2■■□□□ 1.62
TNFAIP1-202ENST00000544907 CCDC7Q96M83 1385 aa25.18■■□□□ 1.62
TNFAIP1-202ENST00000544907 POLR1AO95602 1720 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms