RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 DNMT1P26358 1616 aaKnown RBP25.19■■□□□ 1.62
TMEM50B-210ENST00000542230 CDC42BPAQ5VT25 1732 aa25.18■■□□□ 1.62
TMEM50B-210ENST00000542230 ABCC2Q92887 1545 aa25.18■■□□□ 1.62
TMEM50B-210ENST00000542230 DIEXFQ68CQ4 756 aaKnown RBP25.18■■□□□ 1.62
TMEM50B-210ENST00000542230 ITSN2Q9NZM3 1697 aa25.17■■□□□ 1.62
TMEM50B-210ENST00000542230 GCC2Q8IWJ2 1684 aa25.15■■□□□ 1.62
TMEM50B-210ENST00000542230 TRIM52Q96A61 297 aa25.15■■□□□ 1.62
TMEM50B-210ENST00000542230 KCNH8Q96L42 1107 aa25.15■■□□□ 1.62
TMEM50B-210ENST00000542230 AKNAQ7Z591 1439 aa25.13■■□□□ 1.61
TMEM50B-210ENST00000542230 DENND4BO75064 1496 aaPredicted RBP25.1■■□□□ 1.61
TMEM50B-210ENST00000542230 ROCK1Q13464 1354 aa25.09■■□□□ 1.61
TMEM50B-210ENST00000542230 HNRNPMP52272 730 aaKnown RBP eCLIP25.09■■□□□ 1.61
TMEM50B-210ENST00000542230 FOXD1Q16676 465 aa25.07■■□□□ 1.6
TMEM50B-210ENST00000542230 OSCARQ8IYS5 282 aa25.07■■□□□ 1.6
TMEM50B-210ENST00000542230 TTC37Q6PGP7 1564 aa25.06■■□□□ 1.6
TMEM50B-210ENST00000542230 NCOA1Q15788 1441 aa25.05■■□□□ 1.6
TMEM50B-210ENST00000542230 ZCCHC11Q5TAX3 1644 aaKnown RBP25.05■■□□□ 1.6
TMEM50B-210ENST00000542230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.04■■□□□ 1.6
TMEM50B-210ENST00000542230 CDC42BPBQ9Y5S2 1711 aa25.03■■□□□ 1.6
TMEM50B-210ENST00000542230 MPHOSPH9Q99550 1183 aa25.02■■□□□ 1.6
TMEM50B-210ENST00000542230 UHRF1BP1LA0JNW5 1464 aa25.02■■□□□ 1.6
TMEM50B-210ENST00000542230 KDM5BQ9UGL1 1544 aa25.01■■□□□ 1.59
TMEM50B-210ENST00000542230 SAMD9LQ8IVG5 1584 aa24.98■■□□□ 1.59
TMEM50B-210ENST00000542230 CROCC2H7BZ55 1655 aa24.98■■□□□ 1.59
TMEM50B-210ENST00000542230 MBD5Q9P267 1494 aa24.98■■□□□ 1.59
TMEM50B-210ENST00000542230 PREX2Q70Z35 1606 aa24.97■■□□□ 1.59
TMEM50B-210ENST00000542230 C9orf84Q5VXU9 1444 aa24.95■■□□□ 1.59
TMEM50B-210ENST00000542230 ADGRL2O95490 1459 aa24.94■■□□□ 1.58
TMEM50B-210ENST00000542230 ARHGAP5Q13017 1502 aa24.94■■□□□ 1.58
TMEM50B-210ENST00000542230 PPP1R15AO75807 674 aaPredicted RBP24.94■■□□□ 1.58
TMEM50B-210ENST00000542230 ANKRD30AQ9BXX3 1397 aa24.93■■□□□ 1.58
TMEM50B-210ENST00000542230 ADGBQ8N7X0 1667 aa24.93■■□□□ 1.58
TMEM50B-210ENST00000542230 TSPY4P0CV99 314 aa24.92■■□□□ 1.58
TMEM50B-210ENST00000542230 TSPY10P0CW01 314 aa24.92■■□□□ 1.58
TMEM50B-210ENST00000542230 TONSLQ96HA7 1378 aa24.9■■□□□ 1.58
TMEM50B-210ENST00000542230 SLC4A1APQ9BWU0 796 aaKnown RBP24.9■■□□□ 1.58
TMEM50B-210ENST00000542230 SYCP2Q9BX26 1530 aa24.89■■□□□ 1.58
TMEM50B-210ENST00000542230 TIMELESSQ9UNS1 1208 aa24.89■■□□□ 1.57
TMEM50B-210ENST00000542230 ANKRD50Q9ULJ7 1429 aa24.88■■□□□ 1.57
TMEM50B-210ENST00000542230 SHANK2Q9UPX8 1470 aa24.86■■□□□ 1.57
TMEM50B-210ENST00000542230 MYO5CQ9NQX4 1742 aa24.86■■□□□ 1.57
TMEM50B-210ENST00000542230 PZPP20742 1482 aa24.85■■□□□ 1.57
TMEM50B-210ENST00000542230 ARHGEF5Q12774 1597 aa24.85■■□□□ 1.57
TMEM50B-210ENST00000542230 ARHGEF12Q9NZN5 1544 aa24.85■■□□□ 1.57
TMEM50B-210ENST00000542230 CCDC141Q6ZP82 1450 aa24.85■■□□□ 1.57
TMEM50B-210ENST00000542230 HIRIP3Q9BW71 556 aaPredicted RBP24.84■■□□□ 1.57
TMEM50B-210ENST00000542230 PLCH2O75038 1416 aa24.84■■□□□ 1.57
TMEM50B-210ENST00000542230 KIF15Q9NS87 1388 aa24.84■■□□□ 1.57
TMEM50B-210ENST00000542230 MIER1Q8N108 512 aa24.82■■□□□ 1.56
TMEM50B-210ENST00000542230 ANKRD30BQ9BXX2 1392 aa24.82■■□□□ 1.56
TMEM50B-210ENST00000542230 WDR7Q9Y4E6 1490 aa24.8■■□□□ 1.56
TMEM50B-210ENST00000542230 EFCAB2Q5VUJ9 269 aa24.78■■□□□ 1.56
TMEM50B-210ENST00000542230 ASXL2Q76L83 1435 aa24.77■■□□□ 1.56
TMEM50B-210ENST00000542230 PKD2Q13563 968 aa24.76■■□□□ 1.55
TMEM50B-210ENST00000542230 NUP155O75694 1391 aa24.76■■□□□ 1.55
TMEM50B-210ENST00000542230 RSPH4AQ5TD94 716 aa24.75■■□□□ 1.55
TMEM50B-210ENST00000542230 L3MBTL2Q969R5 705 aa24.74■■□□□ 1.55
TMEM50B-210ENST00000542230 KIAA1107Q9UPP5 1409 aa24.74■■□□□ 1.55
TMEM50B-210ENST00000542230 TRAPPC8Q9Y2L5 1435 aa24.73■■□□□ 1.55
TMEM50B-210ENST00000542230 AFAP1Q8N556 730 aa24.71■■□□□ 1.55
TMEM50B-210ENST00000542230 PLEKHH2Q8IVE3 1493 aa24.68■■□□□ 1.54
TMEM50B-210ENST00000542230 ACIN1Q9UKV3 1341 aaKnown RBP24.68■■□□□ 1.54
TMEM50B-210ENST00000542230 ABCC1P33527 1531 aa24.68■■□□□ 1.54
TMEM50B-210ENST00000542230 RPRD2Q5VT52 1461 aaKnown RBP24.67■■□□□ 1.54
TMEM50B-210ENST00000542230 NPM1P06748 294 aaKnown RBP eCLIP24.66■■□□□ 1.54
TMEM50B-210ENST00000542230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.65■■□□□ 1.54
TMEM50B-210ENST00000542230 MAST1Q9Y2H9 1570 aa24.65■■□□□ 1.54
TMEM50B-210ENST00000542230 ABCA9Q8IUA7 1624 aa24.62■■□□□ 1.53
TMEM50B-210ENST00000542230 FANCAO15360 1455 aa24.62■■□□□ 1.53
TMEM50B-210ENST00000542230 NBPF8Q3BBV2 869 aa24.61■■□□□ 1.53
TMEM50B-210ENST00000542230 CYB5RLQ6IPT4 315 aa24.6■■□□□ 1.53
TMEM50B-210ENST00000542230 TEX14Q8IWB6 1497 aa24.6■■□□□ 1.53
TMEM50B-210ENST00000542230 SPAG9O60271 1321 aaKnown RBP24.58■■□□□ 1.53
TMEM50B-210ENST00000542230 KDM5DQ9BY66 1539 aa24.58■■□□□ 1.53
TMEM50B-210ENST00000542230 DDX10Q13206 875 aaKnown RBP24.58■■□□□ 1.52
TMEM50B-210ENST00000542230 ARAP3Q8WWN8 1544 aa24.57■■□□□ 1.52
TMEM50B-210ENST00000542230 PLXNC1O60486 1568 aa24.57■■□□□ 1.52
TMEM50B-210ENST00000542230 FAM135AQ9P2D6 1515 aa24.56■■□□□ 1.52
TMEM50B-210ENST00000542230 SCAPERQ9BY12 1400 aa24.54■■□□□ 1.52
TMEM50B-210ENST00000542230 YTHDC1Q96MU7 727 aaKnown RBP24.54■■□□□ 1.52
TMEM50B-210ENST00000542230 ADGRL1O94910 1474 aa24.53■■□□□ 1.52
TMEM50B-210ENST00000542230 DUOX2Q9NRD8 1548 aa24.52■■□□□ 1.52
TMEM50B-210ENST00000542230 ZFYVE16Q7Z3T8 1539 aa24.5■■□□□ 1.51
TMEM50B-210ENST00000542230 HSPA5P11021 654 aaKnown RBP24.49■■□□□ 1.51
TMEM50B-210ENST00000542230 MYT1LQ9UL68 1186 aa24.49■■□□□ 1.51
TMEM50B-210ENST00000542230 CD109Q6YHK3 1445 aa24.48■■□□□ 1.51
TMEM50B-210ENST00000542230 UNC13BO14795 1591 aa24.48■■□□□ 1.51
TMEM50B-210ENST00000542230 ZNF326Q5BKZ1 582 aaKnown RBP24.47■■□□□ 1.51
TMEM50B-210ENST00000542230 ERBINQ96RT1 1412 aa24.46■■□□□ 1.51
TMEM50B-210ENST00000542230 RTEL1-TNFRSF6BF6WH68 1400 aa24.44■■□□□ 1.5
TMEM50B-210ENST00000542230 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
TMEM50B-210ENST00000542230 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
TMEM50B-210ENST00000542230 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
TMEM50B-210ENST00000542230 PLA2R1Q13018 1463 aa24.43■■□□□ 1.5
TMEM50B-210ENST00000542230 ATP7AQ04656 1500 aa24.42■■□□□ 1.5
TMEM50B-210ENST00000542230 KDM2AQ9Y2K7 1162 aa24.4■■□□□ 1.5
TMEM50B-210ENST00000542230 EIF4G2P78344 907 aaKnown RBP eCLIP24.39■■□□□ 1.5
TMEM50B-210ENST00000542230 INO80Q9ULG1 1556 aaPredicted RBP24.39■■□□□ 1.5
TMEM50B-210ENST00000542230 IQGAP3Q86VI3 1631 aa24.39■■□□□ 1.5
TMEM50B-210ENST00000542230 MAGI2Q86UL8 1455 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms