RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 SCAPERQ9BY12 1400 aa25.97■■□□□ 1.75
CD4-210ENST00000541982 CDK13Q14004 1512 aaKnown RBP25.93■■□□□ 1.74
CD4-210ENST00000541982 CERKQ8TCT0 537 aa25.93■■□□□ 1.74
CD4-210ENST00000541982 ATP10AO60312 1499 aa25.91■■□□□ 1.74
CD4-210ENST00000541982 EFCAB2Q5VUJ9 269 aa25.9■■□□□ 1.74
CD4-210ENST00000541982 C9orf84Q5VXU9 1444 aa25.89■■□□□ 1.74
CD4-210ENST00000541982 ARHGEF12Q9NZN5 1544 aa25.88■■□□□ 1.73
CD4-210ENST00000541982 MYO5CQ9NQX4 1742 aa25.88■■□□□ 1.73
CD4-210ENST00000541982 CDK11AQ9UQ88 783 aaPredicted RBP25.88■■□□□ 1.73
CD4-210ENST00000541982 PREX1Q8TCU6 1659 aa25.87■■□□□ 1.73
CD4-210ENST00000541982 ATP1B4Q9UN42 357 aaPredicted RBP25.85■■□□□ 1.73
CD4-210ENST00000541982 FMN1Q68DA7 1419 aa25.85■■□□□ 1.73
CD4-210ENST00000541982 DMRT2Q9Y5R5 561 aa25.82■■□□□ 1.72
CD4-210ENST00000541982 ZNF518AQ6AHZ1 1483 aa25.81■■□□□ 1.72
CD4-210ENST00000541982 SETD1BQ9UPS6 1966 aaKnown RBP25.8■■□□□ 1.72
CD4-210ENST00000541982 KIF14Q15058 1648 aa25.78■■□□□ 1.72
CD4-210ENST00000541982 UBTFP17480 764 aaKnown RBP25.77■■□□□ 1.72
CD4-210ENST00000541982 CEBPAP49715 358 aaPredicted RBP25.76■■□□□ 1.71
CD4-210ENST00000541982 ARHGAP5Q13017 1502 aa25.75■■□□□ 1.71
CD4-210ENST00000541982 UHRF1BP1Q6BDS2 1440 aa25.75■■□□□ 1.71
CD4-210ENST00000541982 MYT1LQ9UL68 1186 aa25.75■■□□□ 1.71
CD4-210ENST00000541982 KDM5CP41229 1560 aa25.74■■□□□ 1.71
CD4-210ENST00000541982 CLIP1P30622 1438 aa25.74■■□□□ 1.71
CD4-210ENST00000541982 TROQ12816 1431 aaPredicted RBP25.74■■□□□ 1.71
CD4-210ENST00000541982 AFAP1Q8N556 730 aa25.72■■□□□ 1.71
CD4-210ENST00000541982 STRCQ7RTU9 1775 aa25.71■■□□□ 1.71
CD4-210ENST00000541982 ARHGAP35Q9NRY4 1499 aa25.71■■□□□ 1.71
CD4-210ENST00000541982 REREQ9P2R6 1566 aa25.7■■□□□ 1.71
CD4-210ENST00000541982 DIP2CQ9Y2E4 1556 aa25.67■■□□□ 1.7
CD4-210ENST00000541982 ESF1Q9H501 851 aaKnown RBP25.66■■□□□ 1.7
CD4-210ENST00000541982 MLH3Q9UHC1 1453 aa25.66■■□□□ 1.7
CD4-210ENST00000541982 EHMT2Q96KQ7 1210 aa25.65■■□□□ 1.7
CD4-210ENST00000541982 CDC42BPBQ9Y5S2 1711 aa25.63■■□□□ 1.69
CD4-210ENST00000541982 PTPRTO14522 1441 aa25.62■■□□□ 1.69
CD4-210ENST00000541982 C3P01024 1663 aa25.61■■□□□ 1.69
CD4-210ENST00000541982 DISP3Q9P2K9 1392 aa25.61■■□□□ 1.69
CD4-210ENST00000541982 ABCA6Q8N139 1617 aa25.61■■□□□ 1.69
CD4-210ENST00000541982 AGLP35573 1532 aa25.61■■□□□ 1.69
CD4-210ENST00000541982 LRRIQ1Q96JM4 1722 aa25.59■■□□□ 1.69
CD4-210ENST00000541982 TRAPPC8Q9Y2L5 1435 aa25.58■■□□□ 1.69
CD4-210ENST00000541982 PREX2Q70Z35 1606 aa25.58■■□□□ 1.69
CD4-210ENST00000541982 ABCC1P33527 1531 aa25.57■■□□□ 1.68
CD4-210ENST00000541982 CNTLNQ9NXG0 1405 aa25.55■■□□□ 1.68
CD4-210ENST00000541982 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
CD4-210ENST00000541982 ITSN2Q9NZM3 1697 aa25.55■■□□□ 1.68
CD4-210ENST00000541982 CCDC18Q5T9S5 1454 aa25.54■■□□□ 1.68
CD4-210ENST00000541982 KIDINS220Q9ULH0 1771 aa25.51■■□□□ 1.67
CD4-210ENST00000541982 IQSEC2Q5JU85 1478 aa25.49■■□□□ 1.67
CD4-210ENST00000541982 CASKIN1Q8WXD9 1431 aa25.49■■□□□ 1.67
CD4-210ENST00000541982 SOCS7O14512 581 aa25.49■■□□□ 1.67
CD4-210ENST00000541982 ILDR2Q71H61 639 aa25.48■■□□□ 1.67
CD4-210ENST00000541982 NCOA1Q15788 1441 aa25.47■■□□□ 1.67
CD4-210ENST00000541982 CDC42BPAQ5VT25 1732 aa25.47■■□□□ 1.67
CD4-210ENST00000541982 LTBP4Q8N2S1 1624 aa25.46■■□□□ 1.67
CD4-210ENST00000541982 NPATQ14207 1427 aa25.46■■□□□ 1.67
CD4-210ENST00000541982 MROH2AA6NES4 1674 aa25.45■■□□□ 1.66
CD4-210ENST00000541982 SPATA31D1Q6ZQQ2 1576 aa25.43■■□□□ 1.66
CD4-210ENST00000541982 SAMD9LQ8IVG5 1584 aa25.42■■□□□ 1.66
CD4-210ENST00000541982 CAMSAP1Q5T5Y3 1602 aa25.4■■□□□ 1.66
CD4-210ENST00000541982 SPAG9O60271 1321 aaKnown RBP25.39■■□□□ 1.66
CD4-210ENST00000541982 ZNF777Q9ULD5 760 aaPredicted RBP25.39■■□□□ 1.66
CD4-210ENST00000541982 ZMYM3Q14202 1370 aa25.39■■□□□ 1.65
CD4-210ENST00000541982 FYCO1Q9BQS8 1478 aa25.37■■□□□ 1.65
CD4-210ENST00000541982 SUPT6HQ7KZ85 1726 aaKnown RBP25.36■■□□□ 1.65
CD4-210ENST00000541982 SYCP2Q9BX26 1530 aa25.35■■□□□ 1.65
CD4-210ENST00000541982 PLEKHH2Q8IVE3 1493 aa25.33■■□□□ 1.65
CD4-210ENST00000541982 GPATCH8Q9UKJ3 1502 aaKnown RBP25.32■■□□□ 1.64
CD4-210ENST00000541982 KIAA1107Q9UPP5 1409 aa25.32■■□□□ 1.64
CD4-210ENST00000541982 HNRNPMP52272 730 aaKnown RBP eCLIP25.32■■□□□ 1.64
CD4-210ENST00000541982 PKD2Q13563 968 aa25.32■■□□□ 1.64
CD4-210ENST00000541982 ATP7AQ04656 1500 aa25.32■■□□□ 1.64
CD4-210ENST00000541982 CLTCQ00610 1675 aaKnown RBP25.3■■□□□ 1.64
CD4-210ENST00000541982 NCKAP5LQ9HCH0 1330 aa25.3■■□□□ 1.64
CD4-210ENST00000541982 ZNF142P52746 1687 aaPredicted RBP25.29■■□□□ 1.64
CD4-210ENST00000541982 PLA2R1Q13018 1463 aa25.29■■□□□ 1.64
CD4-210ENST00000541982 A2MP01023 1474 aa25.28■■□□□ 1.64
CD4-210ENST00000541982 CFDP1Q9UEE9 299 aaPredicted RBP25.28■■□□□ 1.64
CD4-210ENST00000541982 PLXNC1O60486 1568 aa25.27■■□□□ 1.64
CD4-210ENST00000541982 MYO3AQ8NEV4 1616 aa25.27■■□□□ 1.64
CD4-210ENST00000541982 PPP6R1Q9UPN7 881 aa25.27■■□□□ 1.64
CD4-210ENST00000541982 INO80Q9ULG1 1556 aaPredicted RBP25.27■■□□□ 1.64
CD4-210ENST00000541982 ZNF335Q9H4Z2 1342 aaPredicted RBP25.26■■□□□ 1.63
CD4-210ENST00000541982 UBAP1LF5GYI3 381 aa25.25■■□□□ 1.63
CD4-210ENST00000541982 CEP170BQ9Y4F5 1589 aaPredicted RBP25.25■■□□□ 1.63
CD4-210ENST00000541982 PTPRKQ15262 1439 aa25.24■■□□□ 1.63
CD4-210ENST00000541982 CCNB3Q8WWL7 1395 aa25.24■■□□□ 1.63
CD4-210ENST00000541982 GGT6Q6P531 493 aa25.24■■□□□ 1.63
CD4-210ENST00000541982 TCOF1Q13428 1488 aaKnown RBP25.22■■□□□ 1.63
CD4-210ENST00000541982 ADGBQ8N7X0 1667 aa25.21■■□□□ 1.63
CD4-210ENST00000541982 MTUS2Q5JR59 1369 aa25.18■■□□□ 1.62
CD4-210ENST00000541982 A2ML1A8K2U0 1454 aa25.14■■□□□ 1.61
CD4-210ENST00000541982 RTEL1-TNFRSF6BF6WH68 1400 aa25.12■■□□□ 1.61
CD4-210ENST00000541982 DNMT1P26358 1616 aaKnown RBP25.11■■□□□ 1.61
CD4-210ENST00000541982 DHX29Q7Z478 1369 aaKnown RBP25.08■■□□□ 1.61
CD4-210ENST00000541982 MBD5Q9P267 1494 aa25.07■■□□□ 1.6
CD4-210ENST00000541982 ZNF644Q9H582 1327 aaPredicted RBP25.07■■□□□ 1.6
CD4-210ENST00000541982 POLR1AO95602 1720 aaPredicted RBP25.06■■□□□ 1.6
CD4-210ENST00000541982 TIAM1Q13009 1591 aa25.06■■□□□ 1.6
CD4-210ENST00000541982 TOM1O60784 492 aa25.05■■□□□ 1.6
CD4-210ENST00000541982 CPS1P31327 1500 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms