RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
FNDC3A-206ENST00000541916 NUDCQ9Y266 331 aa11.54□□□□□ -0.56
FNDC3A-206ENST00000541916 CFTRP13569 1480 aa11.53□□□□□ -0.56
FNDC3A-206ENST00000541916 LAMC3Q9Y6N6 1575 aa11.53□□□□□ -0.56
FNDC3A-206ENST00000541916 MAPK8IP3Q9UPT6 1336 aa11.52□□□□□ -0.57
FNDC3A-206ENST00000541916 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.52□□□□□ -0.57
FNDC3A-206ENST00000541916 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
FNDC3A-206ENST00000541916 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
FNDC3A-206ENST00000541916 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
FNDC3A-206ENST00000541916 PRDM2Q13029 1718 aa11.5□□□□□ -0.57
FNDC3A-206ENST00000541916 PROSER2Q86WR7 435 aaPredicted RBP11.5□□□□□ -0.57
FNDC3A-206ENST00000541916 LAS1LQ9Y4W2 734 aaKnown RBP11.5□□□□□ -0.57
FNDC3A-206ENST00000541916 U2SURPO15042 1029 aaKnown RBP11.49□□□□□ -0.57
FNDC3A-206ENST00000541916 SYNJ2O15056 1496 aa11.49□□□□□ -0.57
FNDC3A-206ENST00000541916 TMF1P82094 1093 aa11.48□□□□□ -0.57
FNDC3A-206ENST00000541916 FAM9BQ8IZU0 186 aa11.48□□□□□ -0.57
FNDC3A-206ENST00000541916 THEMISQ8N1K5 641 aaPredicted RBP11.47□□□□□ -0.57
FNDC3A-206ENST00000541916 DMRT2Q9Y5R5 561 aa11.47□□□□□ -0.57
FNDC3A-206ENST00000541916 NUTM2BA6NNL0 878 aaPredicted RBP11.47□□□□□ -0.57
FNDC3A-206ENST00000541916 NUTM2EB1AL46 878 aaPredicted RBP11.47□□□□□ -0.57
FNDC3A-206ENST00000541916 NUTM2AQ8IVF1 878 aaPredicted RBP11.47□□□□□ -0.57
FNDC3A-206ENST00000541916 IGF1RP08069 1367 aa11.47□□□□□ -0.57
FNDC3A-206ENST00000541916 PSME1Q06323 249 aa11.46□□□□□ -0.57
FNDC3A-206ENST00000541916 VGFO15240 615 aaPredicted RBP11.46□□□□□ -0.57
FNDC3A-206ENST00000541916 BICRAQ9NZM4 1560 aa11.45□□□□□ -0.58
FNDC3A-206ENST00000541916 GOLGA2Q08379 1002 aa11.45□□□□□ -0.58
FNDC3A-206ENST00000541916 MYH16Q9H6N6 1097 aa11.45□□□□□ -0.58
FNDC3A-206ENST00000541916 DDX10Q13206 875 aaKnown RBP11.45□□□□□ -0.58
FNDC3A-206ENST00000541916 RAPGEF3O95398 923 aa11.45□□□□□ -0.58
FNDC3A-206ENST00000541916 HIRIP3Q9BW71 556 aaPredicted RBP11.45□□□□□ -0.58
FNDC3A-206ENST00000541916 TXNDC2Q86VQ3 553 aa11.44□□□□□ -0.58
FNDC3A-206ENST00000541916 ANKLE2Q86XL3 938 aa11.44□□□□□ -0.58
FNDC3A-206ENST00000541916 RTF1Q92541 710 aaKnown RBP11.44□□□□□ -0.58
FNDC3A-206ENST00000541916 PNNQ9H307 717 aaKnown RBP11.44□□□□□ -0.58
FNDC3A-206ENST00000541916 ARHGAP5Q13017 1502 aa11.43□□□□□ -0.58
FNDC3A-206ENST00000541916 AMPHP49418 695 aa11.43□□□□□ -0.58
FNDC3A-206ENST00000541916 LTV1Q96GA3 475 aaPredicted RBP11.43□□□□□ -0.58
FNDC3A-206ENST00000541916 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
FNDC3A-206ENST00000541916 SYNJ1O43426 1573 aa11.42□□□□□ -0.58
FNDC3A-206ENST00000541916 MORC1Q86VD1 984 aa11.42□□□□□ -0.58
FNDC3A-206ENST00000541916 AFAP1Q8N556 730 aa11.41□□□□□ -0.58
FNDC3A-206ENST00000541916 G3V3G9 751 aa11.41□□□□□ -0.58
FNDC3A-206ENST00000541916 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
FNDC3A-206ENST00000541916 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
FNDC3A-206ENST00000541916 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
FNDC3A-206ENST00000541916 TERF2IPQ9NYB0 399 aa11.4□□□□□ -0.58
FNDC3A-206ENST00000541916 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
FNDC3A-206ENST00000541916 KANK4Q5T7N3 995 aaPredicted RBP11.4□□□□□ -0.58
FNDC3A-206ENST00000541916 EIF3AQ14152 1382 aaKnown RBP11.4□□□□□ -0.59
FNDC3A-206ENST00000541916 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
FNDC3A-206ENST00000541916 TRAK1Q9UPV9 953 aa11.39□□□□□ -0.59
FNDC3A-206ENST00000541916 MRS2Q9HD23 443 aa11.38□□□□□ -0.59
FNDC3A-206ENST00000541916 VPS8Q8N3P4 1428 aa11.38□□□□□ -0.59
FNDC3A-206ENST00000541916 CC2D1BQ5T0F9 858 aaKnown RBP11.38□□□□□ -0.59
FNDC3A-206ENST00000541916 SYTL4Q96C24 671 aaPredicted RBP11.38□□□□□ -0.59
FNDC3A-206ENST00000541916 UACAQ9BZF9 1416 aa11.38□□□□□ -0.59
FNDC3A-206ENST00000541916 GTF2E1P29083 439 aaPredicted RBP11.37□□□□□ -0.59
FNDC3A-206ENST00000541916 CD109Q6YHK3 1445 aa11.37□□□□□ -0.59
FNDC3A-206ENST00000541916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.37□□□□□ -0.591e-6■■□□□ 13.5
FNDC3A-206ENST00000541916 MPHOSPH9Q99550 1183 aa11.36□□□□□ -0.59
FNDC3A-206ENST00000541916 ROCK2O75116 1388 aaKnown RBP11.35□□□□□ -0.59
FNDC3A-206ENST00000541916 SIN3AQ96ST3 1273 aa11.34□□□□□ -0.59
FNDC3A-206ENST00000541916 MAGI1Q96QZ7 1491 aaPredicted RBP11.34□□□□□ -0.59
FNDC3A-206ENST00000541916 ESCO1Q5FWF5 840 aa11.33□□□□□ -0.59
FNDC3A-206ENST00000541916 MINK1Q8N4C8 1332 aaPredicted RBP11.33□□□□□ -0.6
FNDC3A-206ENST00000541916 SCAPERQ9BY12 1400 aa11.33□□□□□ -0.6
FNDC3A-206ENST00000541916 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
FNDC3A-206ENST00000541916 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
FNDC3A-206ENST00000541916 PPP1R1BQ9UD71 204 aaPredicted RBP11.32□□□□□ -0.6
FNDC3A-206ENST00000541916 UBAP1LF5GYI3 381 aa11.32□□□□□ -0.6
FNDC3A-206ENST00000541916 OS9Q13438 667 aaPredicted RBP11.31□□□□□ -0.6
FNDC3A-206ENST00000541916 CCDC144AA2RUR9 1427 aa11.31□□□□□ -0.6
FNDC3A-206ENST00000541916 SETD5Q9C0A6 1442 aa11.3□□□□□ -0.6
FNDC3A-206ENST00000541916 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
FNDC3A-206ENST00000541916 GPRASP1Q5JY77 1395 aa11.29□□□□□ -0.6
FNDC3A-206ENST00000541916 C1orf141Q5JVX7 400 aa11.28□□□□□ -0.6
FNDC3A-206ENST00000541916 COG3Q96JB2 828 aa11.28□□□□□ -0.6
FNDC3A-206ENST00000541916 TOM1O60784 492 aa11.28□□□□□ -0.6
FNDC3A-206ENST00000541916 RUSC2Q8N2Y8 1516 aa11.28□□□□□ -0.6
FNDC3A-206ENST00000541916 PPP6R1Q9UPN7 881 aa11.28□□□□□ -0.6
FNDC3A-206ENST00000541916 KIAA0586Q9BVV6 1533 aa11.28□□□□□ -0.6
FNDC3A-206ENST00000541916 STRN4Q9NRL3 753 aa11.27□□□□□ -0.6
FNDC3A-206ENST00000541916 ISY1Q9ULR0 285 aaKnown RBP11.27□□□□□ -0.61
FNDC3A-206ENST00000541916 KIF15Q9NS87 1388 aa11.27□□□□□ -0.61
FNDC3A-206ENST00000541916 ZNF608Q9ULD9 1512 aaPredicted RBP11.27□□□□□ -0.61
FNDC3A-206ENST00000541916 AKNAQ7Z591 1439 aa11.26□□□□□ -0.61
FNDC3A-206ENST00000541916 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
FNDC3A-206ENST00000541916 CEBPAP49715 358 aaPredicted RBP11.26□□□□□ -0.61
FNDC3A-206ENST00000541916 TEX14Q8IWB6 1497 aa11.26□□□□□ -0.61
FNDC3A-206ENST00000541916 EVC2Q86UK5 1308 aa11.26□□□□□ -0.61
FNDC3A-206ENST00000541916 ZNF644Q9H582 1327 aaPredicted RBP11.26□□□□□ -0.61
FNDC3A-206ENST00000541916 MYOM3Q5VTT5 1437 aa11.25□□□□□ -0.61
FNDC3A-206ENST00000541916 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
FNDC3A-206ENST00000541916 SLC26A8Q96RN1 970 aa11.25□□□□□ -0.61
FNDC3A-206ENST00000541916 PLEKHH2Q8IVE3 1493 aa11.25□□□□□ -0.61
FNDC3A-206ENST00000541916 FTSJ3Q8IY81 847 aaKnown RBP11.25□□□□□ -0.61
FNDC3A-206ENST00000541916 CUX1P39880 1505 aa11.24□□□□□ -0.61
FNDC3A-206ENST00000541916 URB2Q14146 1524 aaKnown RBP11.24□□□□□ -0.61
FNDC3A-206ENST00000541916 DHX57Q6P158 1386 aaKnown RBP11.24□□□□□ -0.61
FNDC3A-206ENST00000541916 NUTM2GQ5VZR2 741 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms