RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 ROCK1Q13464 1354 aa21.59■■□□□ 1.05
TSFM-207ENST00000540550 ZNF644Q9H582 1327 aaPredicted RBP21.59■■□□□ 1.05
TSFM-207ENST00000540550 ABCC10Q5T3U5 1492 aa21.58■■□□□ 1.05
TSFM-207ENST00000540550 ADGBQ8N7X0 1667 aa21.58■■□□□ 1.05
TSFM-207ENST00000540550 ABCC2Q92887 1545 aa21.58■■□□□ 1.05
TSFM-207ENST00000540550 CROCC2H7BZ55 1655 aa21.57■■□□□ 1.04
TSFM-207ENST00000540550 NEUROD1Q13562 356 aa21.55■■□□□ 1.04
TSFM-207ENST00000540550 KDM6BO15054 1643 aa21.55■■□□□ 1.04
TSFM-207ENST00000540550 SIN3AQ96ST3 1273 aa21.55■■□□□ 1.04
TSFM-207ENST00000540550 ZNF777Q9ULD5 760 aaPredicted RBP21.54■■□□□ 1.04
TSFM-207ENST00000540550 TIMELESSQ9UNS1 1208 aa21.53■■□□□ 1.04
TSFM-207ENST00000540550 ACIN1Q9UKV3 1341 aaKnown RBP21.52■■□□□ 1.04
TSFM-207ENST00000540550 TRIM52Q96A61 297 aa21.5■■□□□ 1.03
TSFM-207ENST00000540550 PREX2Q70Z35 1606 aa21.49■■□□□ 1.03
TSFM-207ENST00000540550 UHRF1BP1LA0JNW5 1464 aa21.46■■□□□ 1.03
TSFM-207ENST00000540550 ADGRL2O95490 1459 aa21.46■■□□□ 1.03
TSFM-207ENST00000540550 ZCCHC11Q5TAX3 1644 aaKnown RBP21.46■■□□□ 1.03
TSFM-207ENST00000540550 CDC42BPBQ9Y5S2 1711 aa21.45■■□□□ 1.02
TSFM-207ENST00000540550 SHANK2Q9UPX8 1470 aa21.44■■□□□ 1.02
TSFM-207ENST00000540550 TONSLQ96HA7 1378 aa21.43■■□□□ 1.02
TSFM-207ENST00000540550 ANKRD30AQ9BXX3 1397 aa21.42■■□□□ 1.02
TSFM-207ENST00000540550 TTC37Q6PGP7 1564 aa21.42■■□□□ 1.02
TSFM-207ENST00000540550 MYO5CQ9NQX4 1742 aa21.42■■□□□ 1.02
TSFM-207ENST00000540550 ARHGEF5Q12774 1597 aa21.42■■□□□ 1.02
TSFM-207ENST00000540550 NCOA1Q15788 1441 aa21.41■■□□□ 1.02
TSFM-207ENST00000540550 OSCARQ8IYS5 282 aa21.41■■□□□ 1.02
TSFM-207ENST00000540550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.4■■□□□ 1.02
TSFM-207ENST00000540550 SAMD9LQ8IVG5 1584 aa21.39■■□□□ 1.02
TSFM-207ENST00000540550 MPHOSPH9Q99550 1183 aa21.39■■□□□ 1.01
TSFM-207ENST00000540550 KDM5BQ9UGL1 1544 aa21.39■■□□□ 1.01
TSFM-207ENST00000540550 C9orf84Q5VXU9 1444 aa21.38■■□□□ 1.01
TSFM-207ENST00000540550 DENND4BO75064 1496 aaPredicted RBP21.37■■□□□ 1.01
TSFM-207ENST00000540550 ARHGAP5Q13017 1502 aa21.37■■□□□ 1.01
TSFM-207ENST00000540550 PPP1R15AO75807 674 aaPredicted RBP21.35■■□□□ 1.01
TSFM-207ENST00000540550 TSPY4P0CV99 314 aa21.34■■□□□ 1.01
TSFM-207ENST00000540550 TSPY10P0CW01 314 aa21.34■■□□□ 1.01
TSFM-207ENST00000540550 CCDC141Q6ZP82 1450 aa21.33■■□□□ 1.01
TSFM-207ENST00000540550 MBD5Q9P267 1494 aa21.32■■□□□ 1
TSFM-207ENST00000540550 HNRNPMP52272 730 aaKnown RBP eCLIP21.31■■□□□ 1
TSFM-207ENST00000540550 KCNH8Q96L42 1107 aa21.31■■□□□ 1
TSFM-207ENST00000540550 ANKRD50Q9ULJ7 1429 aa21.3■■□□□ 1
TSFM-207ENST00000540550 PLEKHH2Q8IVE3 1493 aa21.3■■□□□ 1
TSFM-207ENST00000540550 SYCP2Q9BX26 1530 aa21.3■■□□□ 1
TSFM-207ENST00000540550 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
TSFM-207ENST00000540550 SLC4A1APQ9BWU0 796 aaKnown RBP21.29■■□□□ 1
TSFM-207ENST00000540550 PZPP20742 1482 aa21.27■■□□□ 1
TSFM-207ENST00000540550 MAST1Q9Y2H9 1570 aa21.25■□□□□ 0.99
TSFM-207ENST00000540550 KIF15Q9NS87 1388 aa21.24■□□□□ 0.99
TSFM-207ENST00000540550 MIER1Q8N108 512 aa21.24■□□□□ 0.99
TSFM-207ENST00000540550 ANKRD30BQ9BXX2 1392 aa21.24■□□□□ 0.99
TSFM-207ENST00000540550 FOXD1Q16676 465 aa21.23■□□□□ 0.99
TSFM-207ENST00000540550 PLCH2O75038 1416 aa21.23■□□□□ 0.99
TSFM-207ENST00000540550 KIAA1107Q9UPP5 1409 aa21.23■□□□□ 0.99
TSFM-207ENST00000540550 WDR7Q9Y4E6 1490 aa21.21■□□□□ 0.99
TSFM-207ENST00000540550 RPRD2Q5VT52 1461 aaKnown RBP21.2■□□□□ 0.98
TSFM-207ENST00000540550 KDM5DQ9BY66 1539 aa21.19■□□□□ 0.98
TSFM-207ENST00000540550 EFCAB2Q5VUJ9 269 aa21.19■□□□□ 0.98
TSFM-207ENST00000540550 PLXNC1O60486 1568 aa21.18■□□□□ 0.98
TSFM-207ENST00000540550 ARAP3Q8WWN8 1544 aa21.18■□□□□ 0.98
TSFM-207ENST00000540550 ABCC1P33527 1531 aa21.17■□□□□ 0.98
TSFM-207ENST00000540550 NUP155O75694 1391 aa21.16■□□□□ 0.98
TSFM-207ENST00000540550 ARHGEF12Q9NZN5 1544 aa21.14■□□□□ 0.97
TSFM-207ENST00000540550 ABCA9Q8IUA7 1624 aa21.13■□□□□ 0.97
TSFM-207ENST00000540550 PKD2Q13563 968 aa21.13■□□□□ 0.97
TSFM-207ENST00000540550 TEX14Q8IWB6 1497 aa21.11■□□□□ 0.97
TSFM-207ENST00000540550 CENPBP07199 599 aaPredicted RBP21.11■□□□□ 0.97
TSFM-207ENST00000540550 L3MBTL2Q969R5 705 aa21.11■□□□□ 0.97
TSFM-207ENST00000540550 ASXL2Q76L83 1435 aa21.1■□□□□ 0.97
TSFM-207ENST00000540550 UNC13BO14795 1591 aa21.1■□□□□ 0.97
TSFM-207ENST00000540550 DUOX2Q9NRD8 1548 aa21.09■□□□□ 0.97
TSFM-207ENST00000540550 NPM1P06748 294 aaKnown RBP eCLIP21.08■□□□□ 0.96
TSFM-207ENST00000540550 FAM135AQ9P2D6 1515 aa21.06■□□□□ 0.96
TSFM-207ENST00000540550 TRAPPC8Q9Y2L5 1435 aa21.05■□□□□ 0.96
TSFM-207ENST00000540550 HIRIP3Q9BW71 556 aaPredicted RBP21.05■□□□□ 0.96
TSFM-207ENST00000540550 FANCAO15360 1455 aa21.04■□□□□ 0.96
TSFM-207ENST00000540550 ERBINQ96RT1 1412 aa21.04■□□□□ 0.96
TSFM-207ENST00000540550 IQGAP3Q86VI3 1631 aa21.02■□□□□ 0.95
TSFM-207ENST00000540550 DDX10Q13206 875 aaKnown RBP21.01■□□□□ 0.95
TSFM-207ENST00000540550 YTHDC1Q96MU7 727 aaKnown RBP21.01■□□□□ 0.95
TSFM-207ENST00000540550 SPAG9O60271 1321 aaKnown RBP21■□□□□ 0.95
TSFM-207ENST00000540550 RTEL1-TNFRSF6BF6WH68 1400 aa21■□□□□ 0.95
TSFM-207ENST00000540550 ZFYVE16Q7Z3T8 1539 aa20.99■□□□□ 0.95
TSFM-207ENST00000540550 ADGRL1O94910 1474 aa20.97■□□□□ 0.95
TSFM-207ENST00000540550 EIF4G2P78344 907 aaKnown RBP eCLIP20.97■□□□□ 0.95
TSFM-207ENST00000540550 MAGI2Q86UL8 1455 aa20.97■□□□□ 0.95
TSFM-207ENST00000540550 HSPA5P11021 654 aaKnown RBP20.96■□□□□ 0.95
TSFM-207ENST00000540550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.96■□□□□ 0.95
TSFM-207ENST00000540550 CFAP74Q9C0B2 1584 aa20.95■□□□□ 0.94
TSFM-207ENST00000540550 INO80Q9ULG1 1556 aaPredicted RBP20.95■□□□□ 0.94
TSFM-207ENST00000540550 ATP7AQ04656 1500 aa20.94■□□□□ 0.94
TSFM-207ENST00000540550 NBPF8Q3BBV2 869 aa20.94■□□□□ 0.94
TSFM-207ENST00000540550 AFAP1Q8N556 730 aa20.94■□□□□ 0.94
TSFM-207ENST00000540550 SCAPERQ9BY12 1400 aa20.93■□□□□ 0.94
TSFM-207ENST00000540550 RIMBP3CA6NJZ7 1639 aa20.91■□□□□ 0.94
TSFM-207ENST00000540550 RIMBP3BA6NNM3 1639 aa20.91■□□□□ 0.94
TSFM-207ENST00000540550 RIMBP3Q9UFD9 1639 aa20.91■□□□□ 0.94
TSFM-207ENST00000540550 PELP1Q8IZL8 1130 aaKnown RBP20.9■□□□□ 0.94
TSFM-207ENST00000540550 CCDC144AA2RUR9 1427 aa20.88■□□□□ 0.93
TSFM-207ENST00000540550 CD109Q6YHK3 1445 aa20.88■□□□□ 0.93
TSFM-207ENST00000540550 CYB5RLQ6IPT4 315 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms