RNA–Protein interactions for RNA: ENST00000539643.1

SLC38A10-203, Transcript of solute carrier family 38 member 10, humanhuman

TSL 1 (best)

Gene SLC38A10, Length 1,988 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-203ENST00000539643 CENPBP07199 599 aaPredicted RBP26.27■■□□□ 1.8
SLC38A10-203ENST00000539643 ABCC5O15440 1437 aa26.26■■□□□ 1.79
SLC38A10-203ENST00000539643 ROCK1Q13464 1354 aa26.25■■□□□ 1.79
SLC38A10-203ENST00000539643 CFDP1Q9UEE9 299 aaPredicted RBP26.25■■□□□ 1.79
SLC38A10-203ENST00000539643 CAMSAP2Q08AD1 1489 aa26.24■■□□□ 1.79
SLC38A10-203ENST00000539643 MIER1Q8N108 512 aa26.24■■□□□ 1.79
SLC38A10-203ENST00000539643 ZNF644Q9H582 1327 aaPredicted RBP26.23■■□□□ 1.79
SLC38A10-203ENST00000539643 NEUROD1Q13562 356 aa26.22■■□□□ 1.79
SLC38A10-203ENST00000539643 KDM5BQ9UGL1 1544 aa26.22■■□□□ 1.79
SLC38A10-203ENST00000539643 CDC42BPAQ5VT25 1732 aa26.22■■□□□ 1.79
SLC38A10-203ENST00000539643 CHIC2Q9UKJ5 165 aa26.2■■□□□ 1.79
SLC38A10-203ENST00000539643 ZCCHC11Q5TAX3 1644 aaKnown RBP26.19■■□□□ 1.78
SLC38A10-203ENST00000539643 RRP7BPQ9NSQ0 103 aa26.18■■□□□ 1.78
SLC38A10-203ENST00000539643 ZNF777Q9ULD5 760 aaPredicted RBP26.13■■□□□ 1.77
SLC38A10-203ENST00000539643 KDM6BO15054 1643 aa26.12■■□□□ 1.77
SLC38A10-203ENST00000539643 SIN3AQ96ST3 1273 aa26.12■■□□□ 1.77
SLC38A10-203ENST00000539643 TIMELESSQ9UNS1 1208 aa26.12■■□□□ 1.77
SLC38A10-203ENST00000539643 CROCC2H7BZ55 1655 aa26.11■■□□□ 1.77
SLC38A10-203ENST00000539643 ADGRL2O95490 1459 aa26.1■■□□□ 1.77
SLC38A10-203ENST00000539643 KCNH8Q96L42 1107 aa26.08■■□□□ 1.77
SLC38A10-203ENST00000539643 PREX2Q70Z35 1606 aa26.08■■□□□ 1.77
SLC38A10-203ENST00000539643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.08■■□□□ 1.77
SLC38A10-203ENST00000539643 ADGBQ8N7X0 1667 aa26.08■■□□□ 1.77
SLC38A10-203ENST00000539643 NCOA1Q15788 1441 aa26.06■■□□□ 1.76
SLC38A10-203ENST00000539643 SHANK2Q9UPX8 1470 aa26.05■■□□□ 1.76
SLC38A10-203ENST00000539643 TTC37Q6PGP7 1564 aa26.04■■□□□ 1.76
SLC38A10-203ENST00000539643 CDC42BPBQ9Y5S2 1711 aa26.04■■□□□ 1.76
SLC38A10-203ENST00000539643 YTHDC1Q96MU7 727 aaKnown RBP26.04■■□□□ 1.76
SLC38A10-203ENST00000539643 ARHGEF5Q12774 1597 aa26.03■■□□□ 1.76
SLC38A10-203ENST00000539643 DENND4BO75064 1496 aaPredicted RBP26.02■■□□□ 1.76
SLC38A10-203ENST00000539643 SAMD9LQ8IVG5 1584 aa25.99■■□□□ 1.75
SLC38A10-203ENST00000539643 MBD5Q9P267 1494 aa25.99■■□□□ 1.75
SLC38A10-203ENST00000539643 ANKRD30AQ9BXX3 1397 aa25.97■■□□□ 1.75
SLC38A10-203ENST00000539643 MYO5CQ9NQX4 1742 aa25.97■■□□□ 1.75
SLC38A10-203ENST00000539643 WDR7Q9Y4E6 1490 aa25.97■■□□□ 1.75
SLC38A10-203ENST00000539643 TRIM52Q96A61 297 aa25.95■■□□□ 1.75
SLC38A10-203ENST00000539643 ARHGAP5Q13017 1502 aa25.95■■□□□ 1.74
SLC38A10-203ENST00000539643 C9orf84Q5VXU9 1444 aa25.95■■□□□ 1.74
SLC38A10-203ENST00000539643 NPM1P06748 294 aaKnown RBP eCLIP25.94■■□□□ 1.74
SLC38A10-203ENST00000539643 HNRNPMP52272 730 aaKnown RBP eCLIP25.94■■□□□ 1.74
SLC38A10-203ENST00000539643 PLCH2O75038 1416 aa25.93■■□□□ 1.74
SLC38A10-203ENST00000539643 MPHOSPH9Q99550 1183 aa25.93■■□□□ 1.74
SLC38A10-203ENST00000539643 RSPH4AQ5TD94 716 aa25.92■■□□□ 1.74
SLC38A10-203ENST00000539643 CCDC141Q6ZP82 1450 aa25.91■■□□□ 1.74
SLC38A10-203ENST00000539643 PPP1R15AO75807 674 aaPredicted RBP25.91■■□□□ 1.74
SLC38A10-203ENST00000539643 TSPY4P0CV99 314 aa25.91■■□□□ 1.74
SLC38A10-203ENST00000539643 TSPY10P0CW01 314 aa25.91■■□□□ 1.74
SLC38A10-203ENST00000539643 GTF3C3Q9Y5Q9 886 aa25.91■■□□□ 1.74
SLC38A10-203ENST00000539643 ASXL2Q76L83 1435 aa25.91■■□□□ 1.74
SLC38A10-203ENST00000539643 TONSLQ96HA7 1378 aa25.9■■□□□ 1.74
SLC38A10-203ENST00000539643 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
SLC38A10-203ENST00000539643 PLEKHH2Q8IVE3 1493 aa25.88■■□□□ 1.73
SLC38A10-203ENST00000539643 EFCAB2Q5VUJ9 269 aa25.87■■□□□ 1.73
SLC38A10-203ENST00000539643 ANKRD50Q9ULJ7 1429 aa25.87■■□□□ 1.73
SLC38A10-203ENST00000539643 SYCP2Q9BX26 1530 aa25.84■■□□□ 1.73
SLC38A10-203ENST00000539643 MAST1Q9Y2H9 1570 aa25.84■■□□□ 1.73
SLC38A10-203ENST00000539643 PZPP20742 1482 aa25.83■■□□□ 1.73
SLC38A10-203ENST00000539643 ARAP3Q8WWN8 1544 aa25.83■■□□□ 1.72
SLC38A10-203ENST00000539643 ABCA9Q8IUA7 1624 aa25.82■■□□□ 1.72
SLC38A10-203ENST00000539643 ANKRD30BQ9BXX2 1392 aa25.8■■□□□ 1.72
SLC38A10-203ENST00000539643 KIF15Q9NS87 1388 aa25.79■■□□□ 1.72
SLC38A10-203ENST00000539643 RIMBP3CA6NJZ7 1639 aa25.78■■□□□ 1.72
SLC38A10-203ENST00000539643 RIMBP3BA6NNM3 1639 aa25.78■■□□□ 1.72
SLC38A10-203ENST00000539643 RIMBP3Q9UFD9 1639 aa25.78■■□□□ 1.72
SLC38A10-203ENST00000539643 CYB5RLQ6IPT4 315 aa25.78■■□□□ 1.72
SLC38A10-203ENST00000539643 SLC4A1APQ9BWU0 796 aaKnown RBP25.77■■□□□ 1.72
SLC38A10-203ENST00000539643 ARHGEF12Q9NZN5 1544 aa25.77■■□□□ 1.72
SLC38A10-203ENST00000539643 KDM5DQ9BY66 1539 aa25.76■■□□□ 1.71
SLC38A10-203ENST00000539643 ABCC1P33527 1531 aa25.74■■□□□ 1.71
SLC38A10-203ENST00000539643 PLXNC1O60486 1568 aa25.73■■□□□ 1.71
SLC38A10-203ENST00000539643 RPRD2Q5VT52 1461 aaKnown RBP25.72■■□□□ 1.71
SLC38A10-203ENST00000539643 FOXD1Q16676 465 aa25.71■■□□□ 1.71
SLC38A10-203ENST00000539643 FANCAO15360 1455 aa25.7■■□□□ 1.7
SLC38A10-203ENST00000539643 DDX10Q13206 875 aaKnown RBP25.67■■□□□ 1.7
SLC38A10-203ENST00000539643 TRAPPC8Q9Y2L5 1435 aa25.67■■□□□ 1.7
SLC38A10-203ENST00000539643 NUP155O75694 1391 aa25.65■■□□□ 1.7
SLC38A10-203ENST00000539643 HIRIP3Q9BW71 556 aaPredicted RBP25.64■■□□□ 1.7
SLC38A10-203ENST00000539643 CD109Q6YHK3 1445 aa25.62■■□□□ 1.69
SLC38A10-203ENST00000539643 TEX14Q8IWB6 1497 aa25.61■■□□□ 1.69
SLC38A10-203ENST00000539643 DUOX2Q9NRD8 1548 aa25.61■■□□□ 1.69
SLC38A10-203ENST00000539643 PKD2Q13563 968 aa25.61■■□□□ 1.69
SLC38A10-203ENST00000539643 AFAP1Q8N556 730 aa25.61■■□□□ 1.69
SLC38A10-203ENST00000539643 UNC13BO14795 1591 aa25.6■■□□□ 1.69
SLC38A10-203ENST00000539643 ADGRL1O94910 1474 aa25.59■■□□□ 1.69
SLC38A10-203ENST00000539643 L3MBTL2Q969R5 705 aa25.58■■□□□ 1.69
SLC38A10-203ENST00000539643 RTEL1-TNFRSF6BF6WH68 1400 aa25.58■■□□□ 1.69
SLC38A10-203ENST00000539643 SPAG9O60271 1321 aaKnown RBP25.58■■□□□ 1.69
SLC38A10-203ENST00000539643 SCAPERQ9BY12 1400 aa25.58■■□□□ 1.68
SLC38A10-203ENST00000539643 ERBINQ96RT1 1412 aa25.57■■□□□ 1.68
SLC38A10-203ENST00000539643 FAM135AQ9P2D6 1515 aa25.55■■□□□ 1.68
SLC38A10-203ENST00000539643 MAGI2Q86UL8 1455 aa25.52■■□□□ 1.68
SLC38A10-203ENST00000539643 ZFYVE16Q7Z3T8 1539 aa25.52■■□□□ 1.68
SLC38A10-203ENST00000539643 CFAP74Q9C0B2 1584 aa25.51■■□□□ 1.67
SLC38A10-203ENST00000539643 IQGAP3Q86VI3 1631 aa25.49■■□□□ 1.67
SLC38A10-203ENST00000539643 INO80Q9ULG1 1556 aaPredicted RBP25.48■■□□□ 1.67
SLC38A10-203ENST00000539643 GLI2P10070 1586 aa25.46■■□□□ 1.67
SLC38A10-203ENST00000539643 ATP7AQ04656 1500 aa25.46■■□□□ 1.67
SLC38A10-203ENST00000539643 ZNF518AQ6AHZ1 1483 aa25.44■■□□□ 1.66
SLC38A10-203ENST00000539643 NEO1Q92859 1461 aa25.44■■□□□ 1.66
SLC38A10-203ENST00000539643 MAP3K4Q9Y6R4 1608 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms