RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 DOK7Q18PE1 504 aa9.86□□□□□ -0.83
KNTC1-210ENST00000539013 HOXB3P14651 431 aaPredicted RBP9.84□□□□□ -0.83
KNTC1-210ENST00000539013 EMP3P54852 163 aa9.84□□□□□ -0.83
KNTC1-210ENST00000539013 MARVELD3Q96A59 401 aa9.84□□□□□ -0.83
KNTC1-210ENST00000539013 MFRPQ9BY79 579 aa9.84□□□□□ -0.83
KNTC1-210ENST00000539013 RIMBP2O15034 1052 aa9.83□□□□□ -0.84
KNTC1-210ENST00000539013 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
KNTC1-210ENST00000539013 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
KNTC1-210ENST00000539013 TMEM92Q6UXU6 159 aa9.8□□□□□ -0.84
KNTC1-210ENST00000539013 ZSWIM6Q9HCJ5 1215 aa9.8□□□□□ -0.84
KNTC1-210ENST00000539013 HS3ST6Q96QI5 342 aa9.76□□□□□ -0.85
KNTC1-210ENST00000539013 NACADO15069 1562 aa9.75□□□□□ -0.85
KNTC1-210ENST00000539013 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
KNTC1-210ENST00000539013 ABCC9O60706 1549 aa9.75□□□□□ -0.85
KNTC1-210ENST00000539013 HS6ST3Q8IZP7 471 aa9.74□□□□□ -0.85
KNTC1-210ENST00000539013 RTN4Q9NQC3 1192 aaKnown RBP9.73□□□□□ -0.85
KNTC1-210ENST00000539013 KIF3CO14782 793 aa9.7□□□□□ -0.86
KNTC1-210ENST00000539013 POTEB3A0JP26 581 aa9.69□□□□□ -0.86
KNTC1-210ENST00000539013 ERBB3P21860 1342 aa9.69□□□□□ -0.86
KNTC1-210ENST00000539013 GPR153Q6NV75 609 aa9.69□□□□□ -0.86
KNTC1-210ENST00000539013 POTEBQ6S5H4 581 aa9.69□□□□□ -0.86
KNTC1-210ENST00000539013 DNAJC5Q9H3Z4 198 aa9.69□□□□□ -0.86
KNTC1-210ENST00000539013 SCRIBQ14160 1630 aa9.67□□□□□ -0.86
KNTC1-210ENST00000539013 SPNS2Q8IVW8 549 aa9.67□□□□□ -0.86
KNTC1-210ENST00000539013 C2orf72A6NCS6 295 aa9.66□□□□□ -0.86
KNTC1-210ENST00000539013 CHGAP10645 457 aaKnown RBP9.65□□□□□ -0.86
KNTC1-210ENST00000539013 TMC2Q8TDI7 906 aa9.65□□□□□ -0.86
KNTC1-210ENST00000539013 KRTAP3-3Q9BYR6 98 aa9.65□□□□□ -0.86
KNTC1-210ENST00000539013 KRTAP3-2Q9BYR7 98 aa9.65□□□□□ -0.86
KNTC1-210ENST00000539013 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
KNTC1-210ENST00000539013 PPP1R37O75864 691 aa9.63□□□□□ -0.87
KNTC1-210ENST00000539013 SLC34A2O95436 690 aa9.63□□□□□ -0.87
KNTC1-210ENST00000539013 MMRN1Q13201 1228 aa9.63□□□□□ -0.87
KNTC1-210ENST00000539013 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
KNTC1-210ENST00000539013 ARSIQ5FYB1 569 aa9.61□□□□□ -0.87
KNTC1-210ENST00000539013 RSF1Q96T23 1441 aaPredicted RBP9.61□□□□□ -0.87
KNTC1-210ENST00000539013 ZNF687Q8N1G0 1237 aa9.6□□□□□ -0.87
KNTC1-210ENST00000539013 RB1CC1Q8TDY2 1594 aa9.58□□□□□ -0.88
KNTC1-210ENST00000539013 ZNF316A6NFI3 1004 aaPredicted RBP9.57□□□□□ -0.88
KNTC1-210ENST00000539013 FOXK1P85037 733 aa9.55□□□□□ -0.88
KNTC1-210ENST00000539013 GPHNQ9NQX3 736 aaPredicted RBP9.55□□□□□ -0.88
KNTC1-210ENST00000539013 NKX1-1Q15270 411 aaPredicted RBP9.54□□□□□ -0.88
KNTC1-210ENST00000539013 PCDHGA4Q9Y5G9 962 aa9.54□□□□□ -0.88
KNTC1-210ENST00000539013 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.886e-8■□□□□ 8.3
KNTC1-210ENST00000539013 NUDT7P0C024 238 aa9.51□□□□□ -0.89
KNTC1-210ENST00000539013 PTCD2Q8WV60 388 aaKnown RBP9.51□□□□□ -0.89
KNTC1-210ENST00000539013 PSDA5PKW4 1024 aaPredicted RBP9.49□□□□□ -0.89
KNTC1-210ENST00000539013 PTGER2P43116 358 aa9.49□□□□□ -0.89
KNTC1-210ENST00000539013 PLPP6Q8IY26 295 aa9.49□□□□□ -0.89
KNTC1-210ENST00000539013 TBC1D12O60347 775 aa9.48□□□□□ -0.89
KNTC1-210ENST00000539013 PBX2P40425 430 aa9.48□□□□□ -0.89
KNTC1-210ENST00000539013 DSG2Q14126 1118 aa9.47□□□□□ -0.89
KNTC1-210ENST00000539013 LHX6Q9UPM6 363 aa9.47□□□□□ -0.89
KNTC1-210ENST00000539013 KDM4FA0A1W2PPD8 638 aa9.44□□□□□ -0.9
KNTC1-210ENST00000539013 GTPBP6O43824 516 aaPredicted RBP9.44□□□□□ -0.9
KNTC1-210ENST00000539013 CRISPLD2Q9H0B8 497 aa9.44□□□□□ -0.9
KNTC1-210ENST00000539013 CECR2Q9BXF3 1484 aa9.44□□□□□ -0.9
KNTC1-210ENST00000539013 MROH2BQ7Z745 1585 aa9.44□□□□□ -0.9
KNTC1-210ENST00000539013 BAZ1AQ9NRL2 1556 aaPredicted RBP9.44□□□□□ -0.9
KNTC1-210ENST00000539013 PDE4AP27815 886 aa9.43□□□□□ -0.9
KNTC1-210ENST00000539013 LSM11P83369 360 aaKnown RBP eCLIP9.42□□□□□ -0.9
KNTC1-210ENST00000539013 RNF166Q96A37 237 aaPredicted RBP9.41□□□□□ -0.9
KNTC1-210ENST00000539013 MYT1LQ9UL68 1186 aa9.41□□□□□ -0.9
KNTC1-210ENST00000539013 PPP1R15BQ5SWA1 713 aa9.39□□□□□ -0.91
KNTC1-210ENST00000539013 ANKRD13DQ6ZTN6 518 aa9.39□□□□□ -0.91
KNTC1-210ENST00000539013 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
KNTC1-210ENST00000539013 ARHGAP33O14559 1287 aa9.37□□□□□ -0.91
KNTC1-210ENST00000539013 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.37□□□□□ -0.91
KNTC1-210ENST00000539013 NCKAP5LQ9HCH0 1330 aa9.36□□□□□ -0.91
KNTC1-210ENST00000539013 PPP4R3BQ5MIZ7 849 aa9.36□□□□□ -0.91
KNTC1-210ENST00000539013 WIZO95785 1651 aa9.36□□□□□ -0.91
KNTC1-210ENST00000539013 POTEEQ6S8J3 1075 aa9.35□□□□□ -0.91
KNTC1-210ENST00000539013 SMARCA4P51532 1647 aa9.34□□□□□ -0.91
KNTC1-210ENST00000539013 MFSD10Q14728 455 aa9.33□□□□□ -0.92
KNTC1-210ENST00000539013 DDX27Q96GQ7 796 aaKnown RBP9.33□□□□□ -0.92
KNTC1-210ENST00000539013 UNC13AQ9UPW8 1703 aa9.33□□□□□ -0.92
KNTC1-210ENST00000539013 TOP2AP11388 1531 aaKnown RBP9.32□□□□□ -0.92
KNTC1-210ENST00000539013 TK2O00142 265 aa9.32□□□□□ -0.92
KNTC1-210ENST00000539013 AXIN2Q9Y2T1 843 aa9.32□□□□□ -0.92
KNTC1-210ENST00000539013 BBXQ8WY36 941 aaPredicted RBP9.31□□□□□ -0.92
KNTC1-210ENST00000539013 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
KNTC1-210ENST00000539013 LARP6Q9BRS8 491 aaKnown RBP9.31□□□□□ -0.92
KNTC1-210ENST00000539013 UPF1Q92900 1129 aaKnown RBP eCLIP9.3□□□□□ -0.92
KNTC1-210ENST00000539013 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
KNTC1-210ENST00000539013 EIF4G1Q04637 1599 aaKnown RBP9.29□□□□□ -0.92
KNTC1-210ENST00000539013 ANO8Q9HCE9 1232 aaPredicted RBP9.28□□□□□ -0.92
KNTC1-210ENST00000539013 LOC105371045A0A1W2PR82 267 aa9.27□□□□□ -0.93
KNTC1-210ENST00000539013 BICRAQ9NZM4 1560 aa9.25□□□□□ -0.93
KNTC1-210ENST00000539013 HRCP23327 699 aa9.25□□□□□ -0.93
KNTC1-210ENST00000539013 PSEN2P49810 448 aa9.25□□□□□ -0.93
KNTC1-210ENST00000539013 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
KNTC1-210ENST00000539013 BCL2L12Q9HB09 334 aa9.25□□□□□ -0.93
KNTC1-210ENST00000539013 PEG3Q9GZU2 1588 aa9.24□□□□□ -0.93
KNTC1-210ENST00000539013 EVI5O60447 810 aa9.24□□□□□ -0.93
KNTC1-210ENST00000539013 FOSBP53539 338 aa9.24□□□□□ -0.93
KNTC1-210ENST00000539013 MAP3K9P80192 1104 aa9.24□□□□□ -0.93
KNTC1-210ENST00000539013 DMRTA1Q5VZB9 504 aa9.24□□□□□ -0.93
KNTC1-210ENST00000539013 JPH4Q96JJ6 628 aa9.24□□□□□ -0.93
KNTC1-210ENST00000539013 HRO43593 1189 aa9.23□□□□□ -0.93
KNTC1-210ENST00000539013 SMARCA2P51531 1590 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms