RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 DNMT1P26358 1616 aaKnown RBP22■■□□□ 1.11
CDH20-203ENST00000538374 AKNAQ7Z591 1439 aa21.99■■□□□ 1.11
CDH20-203ENST00000538374 CDC42BPAQ5VT25 1732 aa21.97■■□□□ 1.11
CDH20-203ENST00000538374 PTPRGP23470 1445 aa21.96■■□□□ 1.11
CDH20-203ENST00000538374 CDK11AQ9UQ88 783 aaPredicted RBP21.95■■□□□ 1.1
CDH20-203ENST00000538374 ABCC10Q5T3U5 1492 aa21.95■■□□□ 1.1
CDH20-203ENST00000538374 GPATCH8Q9UKJ3 1502 aaKnown RBP21.94■■□□□ 1.1
CDH20-203ENST00000538374 TRIM52Q96A61 297 aa21.93■■□□□ 1.1
CDH20-203ENST00000538374 CROCC2H7BZ55 1655 aa21.93■■□□□ 1.1
CDH20-203ENST00000538374 PPP1R15AO75807 674 aaPredicted RBP21.93■■□□□ 1.1
CDH20-203ENST00000538374 KDM6BO15054 1643 aa21.92■■□□□ 1.1
CDH20-203ENST00000538374 DAPK1P53355 1430 aa21.91■■□□□ 1.1
CDH20-203ENST00000538374 CAMSAP2Q08AD1 1489 aa21.9■■□□□ 1.1
CDH20-203ENST00000538374 UACAQ9BZF9 1416 aa21.89■■□□□ 1.09
CDH20-203ENST00000538374 ABCC2Q92887 1545 aa21.89■■□□□ 1.09
CDH20-203ENST00000538374 ABCC5O15440 1437 aa21.88■■□□□ 1.09
CDH20-203ENST00000538374 CHIC2Q9UKJ5 165 aa21.88■■□□□ 1.09
CDH20-203ENST00000538374 ADGBQ8N7X0 1667 aa21.87■■□□□ 1.09
CDH20-203ENST00000538374 FKBP8Q14318 412 aa21.86■■□□□ 1.09
CDH20-203ENST00000538374 TSHZ2Q9NRE2 1034 aa21.84■■□□□ 1.09
CDH20-203ENST00000538374 ROCK1Q13464 1354 aa21.84■■□□□ 1.09
CDH20-203ENST00000538374 ZNF644Q9H582 1327 aaPredicted RBP21.84■■□□□ 1.09
CDH20-203ENST00000538374 RRP7BPQ9NSQ0 103 aa21.83■■□□□ 1.09
CDH20-203ENST00000538374 PREX2Q70Z35 1606 aa21.81■■□□□ 1.08
CDH20-203ENST00000538374 DENND4BO75064 1496 aaPredicted RBP21.81■■□□□ 1.08
CDH20-203ENST00000538374 CDC42BPBQ9Y5S2 1711 aa21.81■■□□□ 1.08
CDH20-203ENST00000538374 UHRF1BP1LA0JNW5 1464 aa21.8■■□□□ 1.08
CDH20-203ENST00000538374 TONSLQ96HA7 1378 aa21.79■■□□□ 1.08
CDH20-203ENST00000538374 ZCCHC11Q5TAX3 1644 aaKnown RBP21.78■■□□□ 1.08
CDH20-203ENST00000538374 PLEKHD1A6NEE1 506 aa21.78■■□□□ 1.08
CDH20-203ENST00000538374 ADGRL2O95490 1459 aa21.77■■□□□ 1.08
CDH20-203ENST00000538374 TTC37Q6PGP7 1564 aa21.76■■□□□ 1.07
CDH20-203ENST00000538374 ANP32CO43423 234 aa21.76■■□□□ 1.07
CDH20-203ENST00000538374 CFDP1Q9UEE9 299 aaPredicted RBP21.74■■□□□ 1.07
CDH20-203ENST00000538374 SAMD9LQ8IVG5 1584 aa21.73■■□□□ 1.07
CDH20-203ENST00000538374 ARHGEF5Q12774 1597 aa21.73■■□□□ 1.07
CDH20-203ENST00000538374 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.73■■□□□ 1.07
CDH20-203ENST00000538374 KDM5BQ9UGL1 1544 aa21.73■■□□□ 1.07
CDH20-203ENST00000538374 FOXD1Q16676 465 aa21.73■■□□□ 1.07
CDH20-203ENST00000538374 SHANK2Q9UPX8 1470 aa21.72■■□□□ 1.07
CDH20-203ENST00000538374 MYO5CQ9NQX4 1742 aa21.69■■□□□ 1.06
CDH20-203ENST00000538374 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
CDH20-203ENST00000538374 NCOA1Q15788 1441 aa21.69■■□□□ 1.06
CDH20-203ENST00000538374 MBD5Q9P267 1494 aa21.66■■□□□ 1.06
CDH20-203ENST00000538374 IRX6P78412 446 aaPredicted RBP21.63■■□□□ 1.05
CDH20-203ENST00000538374 ZNF777Q9ULD5 760 aaPredicted RBP21.6■■□□□ 1.05
CDH20-203ENST00000538374 C9orf84Q5VXU9 1444 aa21.6■■□□□ 1.05
CDH20-203ENST00000538374 MAST1Q9Y2H9 1570 aa21.59■■□□□ 1.05
CDH20-203ENST00000538374 CCER2I3L3R5 266 aa21.59■■□□□ 1.05
CDH20-203ENST00000538374 HSPA5P11021 654 aaKnown RBP21.59■■□□□ 1.05
CDH20-203ENST00000538374 PZPP20742 1482 aa21.59■■□□□ 1.05
CDH20-203ENST00000538374 SYCP2Q9BX26 1530 aa21.57■■□□□ 1.04
CDH20-203ENST00000538374 CCDC141Q6ZP82 1450 aa21.56■■□□□ 1.04
CDH20-203ENST00000538374 ARHGAP5Q13017 1502 aa21.56■■□□□ 1.04
CDH20-203ENST00000538374 ANKRD30AQ9BXX3 1397 aa21.56■■□□□ 1.04
CDH20-203ENST00000538374 HNRNPUQ00839 825 aaKnown RBP eCLIP21.56■■□□□ 1.04
CDH20-203ENST00000538374 CNGB1Q14028 1251 aaPredicted RBP21.56■■□□□ 1.04
CDH20-203ENST00000538374 CCDC184Q52MB2 194 aa21.56■■□□□ 1.04
CDH20-203ENST00000538374 NEFLP07196 543 aa21.55■■□□□ 1.04
CDH20-203ENST00000538374 MPHOSPH9Q99550 1183 aa21.54■■□□□ 1.04
CDH20-203ENST00000538374 WASHC2AQ641Q2 1341 aa21.54■■□□□ 1.04
CDH20-203ENST00000538374 KDM5DQ9BY66 1539 aa21.53■■□□□ 1.04
CDH20-203ENST00000538374 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
CDH20-203ENST00000538374 MYT1Q01538 1121 aa21.52■■□□□ 1.03
CDH20-203ENST00000538374 L3MBTL2Q969R5 705 aa21.51■■□□□ 1.03
CDH20-203ENST00000538374 ARAP3Q8WWN8 1544 aa21.51■■□□□ 1.03
CDH20-203ENST00000538374 PLXNC1O60486 1568 aa21.5■■□□□ 1.03
CDH20-203ENST00000538374 PLCH2O75038 1416 aa21.5■■□□□ 1.03
CDH20-203ENST00000538374 ANKRD50Q9ULJ7 1429 aa21.5■■□□□ 1.03
CDH20-203ENST00000538374 KIAA1107Q9UPP5 1409 aa21.5■■□□□ 1.03
CDH20-203ENST00000538374 ANKRD30BQ9BXX2 1392 aa21.5■■□□□ 1.03
CDH20-203ENST00000538374 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
CDH20-203ENST00000538374 ABCC1P33527 1531 aa21.49■■□□□ 1.03
CDH20-203ENST00000538374 PLEKHH2Q8IVE3 1493 aa21.48■■□□□ 1.03
CDH20-203ENST00000538374 HNRNPMP52272 730 aaKnown RBP eCLIP21.48■■□□□ 1.03
CDH20-203ENST00000538374 WDR7Q9Y4E6 1490 aa21.47■■□□□ 1.03
CDH20-203ENST00000538374 ABCA9Q8IUA7 1624 aa21.47■■□□□ 1.03
CDH20-203ENST00000538374 RPRD2Q5VT52 1461 aaKnown RBP21.46■■□□□ 1.03
CDH20-203ENST00000538374 KIF15Q9NS87 1388 aa21.44■■□□□ 1.02
CDH20-203ENST00000538374 SENP3-EIF4A1A0A087X0R7 540 aa21.44■■□□□ 1.02
CDH20-203ENST00000538374 OSCARQ8IYS5 282 aa21.43■■□□□ 1.02
CDH20-203ENST00000538374 TEX14Q8IWB6 1497 aa21.43■■□□□ 1.02
CDH20-203ENST00000538374 UNC13BO14795 1591 aa21.43■■□□□ 1.02
CDH20-203ENST00000538374 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
CDH20-203ENST00000538374 RSPH4AQ5TD94 716 aa21.42■■□□□ 1.02
CDH20-203ENST00000538374 RBM19Q9Y4C8 960 aaKnown RBP21.42■■□□□ 1.02
CDH20-203ENST00000538374 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.02
CDH20-203ENST00000538374 FAM9BQ8IZU0 186 aa21.42■■□□□ 1.02
CDH20-203ENST00000538374 TSPY4P0CV99 314 aa21.4■■□□□ 1.02
CDH20-203ENST00000538374 TSPY10P0CW01 314 aa21.4■■□□□ 1.02
CDH20-203ENST00000538374 SLC4A1APQ9BWU0 796 aaKnown RBP21.37■■□□□ 1.01
CDH20-203ENST00000538374 POLR3GLQ9BT43 218 aa21.36■■□□□ 1.01
CDH20-203ENST00000538374 ASXL2Q76L83 1435 aa21.36■■□□□ 1.01
CDH20-203ENST00000538374 ANP32EQ9BTT0 268 aa21.35■■□□□ 1.01
CDH20-203ENST00000538374 ZNF326Q5BKZ1 582 aaKnown RBP21.34■■□□□ 1.01
CDH20-203ENST00000538374 MAGI2Q86UL8 1455 aa21.33■■□□□ 1.01
CDH20-203ENST00000538374 DUOX2Q9NRD8 1548 aa21.33■■□□□ 1
CDH20-203ENST00000538374 TRAPPC8Q9Y2L5 1435 aa21.33■■□□□ 1
CDH20-203ENST00000538374 IQGAP3Q86VI3 1631 aa21.32■■□□□ 1
CDH20-203ENST00000538374 FAM135AQ9P2D6 1515 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms