RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PAK3O75914 559 aaPredicted RBP21.46■■□□□ 1.03
SCARB1-205ENST00000538291 ISY1Q9ULR0 285 aaKnown RBP21.45■■□□□ 1.02
SCARB1-205ENST00000538291 CFAP44Q96MT7 982 aa21.45■■□□□ 1.02
SCARB1-205ENST00000538291 PKD2Q13563 968 aa21.44■■□□□ 1.02
SCARB1-205ENST00000538291 HSCBQ8IWL3 235 aa21.43■■□□□ 1.02
SCARB1-205ENST00000538291 EFCAB2Q5VUJ9 269 aa21.42■■□□□ 1.02
SCARB1-205ENST00000538291 ERICH6BQ5W0A0 696 aa21.42■■□□□ 1.02
SCARB1-205ENST00000538291 IPO8O15397 1037 aaKnown RBP21.41■■□□□ 1.02
SCARB1-205ENST00000538291 CALD1Q05682 793 aaKnown RBP21.41■■□□□ 1.02
SCARB1-205ENST00000538291 CLSTN1O94985 981 aa21.38■■□□□ 1.01
SCARB1-205ENST00000538291 CHMP4AQ9BY43 222 aa21.38■■□□□ 1.01
SCARB1-205ENST00000538291 KTN1Q86UP2 1357 aaKnown RBP21.38■■□□□ 1.01
SCARB1-205ENST00000538291 MYO15BQ96JP2 1530 aa21.38■■□□□ 1.01
SCARB1-205ENST00000538291 ARHGAP35Q9NRY4 1499 aa21.37■■□□□ 1.01
SCARB1-205ENST00000538291 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
SCARB1-205ENST00000538291 SMARCA2P51531 1590 aa21.35■■□□□ 1.01
SCARB1-205ENST00000538291 U2AF1L5P0DN76 240 aaPredicted RBP21.35■■□□□ 1.01
SCARB1-205ENST00000538291 U2AF1Q01081 240 aaKnown RBP eCLIP21.35■■□□□ 1.013e-14■■□□□ 13.6
SCARB1-205ENST00000538291 TMX4Q9H1E5 349 aaPredicted RBP21.35■■□□□ 1.01
SCARB1-205ENST00000538291 KIAA1211Q6ZU35 1233 aa21.34■■□□□ 1.01
SCARB1-205ENST00000538291 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
SCARB1-205ENST00000538291 HSPA5P11021 654 aaKnown RBP21.34■■□□□ 1.01
SCARB1-205ENST00000538291 B4GALNT3Q6L9W6 998 aa21.34■■□□□ 1.01
SCARB1-205ENST00000538291 GNL2Q13823 731 aaKnown RBP21.34■■□□□ 1.01
SCARB1-205ENST00000538291 PDS5BQ9NTI5 1447 aa21.33■■□□□ 1
SCARB1-205ENST00000538291 APBB1O00213 710 aa21.31■■□□□ 1
SCARB1-205ENST00000538291 NOP58Q9Y2X3 529 aaKnown RBP21.31■■□□□ 1
SCARB1-205ENST00000538291 CCDC9Q9Y3X0 531 aaKnown RBP21.31■■□□□ 1
SCARB1-205ENST00000538291 NUP155O75694 1391 aa21.3■■□□□ 1
SCARB1-205ENST00000538291 EID1Q9Y6B2 187 aa21.3■■□□□ 1
SCARB1-205ENST00000538291 ROCK2O75116 1388 aaKnown RBP21.3■■□□□ 1
SCARB1-205ENST00000538291 CCER2I3L3R5 266 aa21.29■■□□□ 1
SCARB1-205ENST00000538291 ANKRD30AQ9BXX3 1397 aa21.29■■□□□ 1
SCARB1-205ENST00000538291 SPAG9O60271 1321 aaKnown RBP21.28■■□□□ 1
SCARB1-205ENST00000538291 STK31Q9BXU1 1019 aa21.27■■□□□ 1
SCARB1-205ENST00000538291 EIF3AQ14152 1382 aaKnown RBP21.27■■□□□ 1
SCARB1-205ENST00000538291 KIF3BO15066 747 aa21.27■■□□□ 1
SCARB1-205ENST00000538291 FOXD1Q16676 465 aa21.26■□□□□ 0.99
SCARB1-205ENST00000538291 NAP1L5Q96NT1 182 aaPredicted RBP21.26■□□□□ 0.99
SCARB1-205ENST00000538291 TERF2IPQ9NYB0 399 aa21.26■□□□□ 0.99
SCARB1-205ENST00000538291 SOGA1O94964 1423 aa21.25■□□□□ 0.99
SCARB1-205ENST00000538291 HDAC5Q9UQL6 1122 aa21.25■□□□□ 0.99
SCARB1-205ENST00000538291 RALBP1Q15311 655 aa21.24■□□□□ 0.99
SCARB1-205ENST00000538291 GORABQ5T7V8 394 aa21.24■□□□□ 0.99
SCARB1-205ENST00000538291 CHAF1AQ13111 956 aaPredicted RBP21.23■□□□□ 0.99
SCARB1-205ENST00000538291 ITPRIPQ8IWB1 547 aa21.23■□□□□ 0.99
SCARB1-205ENST00000538291 FMN1Q68DA7 1419 aa21.23■□□□□ 0.99
SCARB1-205ENST00000538291 MPHOSPH9Q99550 1183 aa21.23■□□□□ 0.99
SCARB1-205ENST00000538291 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
SCARB1-205ENST00000538291 RWDD1Q9H446 243 aaPredicted RBP21.22■□□□□ 0.99
SCARB1-205ENST00000538291 L1TD1Q5T7N2 865 aaKnown RBP21.22■□□□□ 0.99
SCARB1-205ENST00000538291 NCBP3Q53F19 620 aaKnown RBP21.22■□□□□ 0.99
SCARB1-205ENST00000538291 NGDNQ8NEJ9 315 aaKnown RBP21.21■□□□□ 0.99
SCARB1-205ENST00000538291 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
SCARB1-205ENST00000538291 DRC7Q8IY82 874 aa21.21■□□□□ 0.99
SCARB1-205ENST00000538291 TAF7LQ5H9L4 462 aa21.21■□□□□ 0.99
SCARB1-205ENST00000538291 VPS8Q8N3P4 1428 aa21.2■□□□□ 0.98
SCARB1-205ENST00000538291 CHMP3Q9Y3E7 222 aa21.19■□□□□ 0.98
SCARB1-205ENST00000538291 SPRYD3Q8NCJ5 442 aa21.19■□□□□ 0.98
SCARB1-205ENST00000538291 WASHC2CQ9Y4E1 1318 aa21.18■□□□□ 0.98
SCARB1-205ENST00000538291 GPATCH3Q96I76 525 aa21.17■□□□□ 0.98
SCARB1-205ENST00000538291 RSPH4AQ5TD94 716 aa21.17■□□□□ 0.98
SCARB1-205ENST00000538291 HTATSF1O43719 755 aaKnown RBP21.16■□□□□ 0.98
SCARB1-205ENST00000538291 RCAN3Q9UKA8 241 aa21.15■□□□□ 0.98
SCARB1-205ENST00000538291 HMMRO75330 724 aa21.15■□□□□ 0.98
SCARB1-205ENST00000538291 AMPHP49418 695 aa21.15■□□□□ 0.98
SCARB1-205ENST00000538291 KANK4Q5T7N3 995 aaPredicted RBP21.14■□□□□ 0.97
SCARB1-205ENST00000538291 G3V3G9 751 aa21.14■□□□□ 0.97
SCARB1-205ENST00000538291 DCAF8Q5TAQ9 597 aa21.14■□□□□ 0.97
SCARB1-205ENST00000538291 MSNP26038 577 aaKnown RBP21.13■□□□□ 0.97
SCARB1-205ENST00000538291 HNRNPMP52272 730 aaKnown RBP eCLIP21.13■□□□□ 0.975e-9■■■■□ 25.7
SCARB1-205ENST00000538291 LMOD3Q0VAK6 560 aa21.13■□□□□ 0.97
SCARB1-205ENST00000538291 KIAA2012Q0VF49 1180 aa21.12■□□□□ 0.97
SCARB1-205ENST00000538291 SMC4Q9NTJ3 1288 aa21.12■□□□□ 0.97
SCARB1-205ENST00000538291 GBP4Q96PP9 640 aa21.11■□□□□ 0.97
SCARB1-205ENST00000538291 PMFBP1Q8TBY8 1022 aa21.1■□□□□ 0.97
SCARB1-205ENST00000538291 NUTM2DQ5VT03 806 aaPredicted RBP21.1■□□□□ 0.97
SCARB1-205ENST00000538291 PTMSP20962 102 aa21.09■□□□□ 0.97
SCARB1-205ENST00000538291 GTF2E1P29083 439 aaPredicted RBP21.09■□□□□ 0.97
SCARB1-205ENST00000538291 CCDC34Q96HJ3 373 aa21.08■□□□□ 0.97
SCARB1-205ENST00000538291 SLC4A10Q6U841 1118 aa21.07■□□□□ 0.96
SCARB1-205ENST00000538291 LTV1Q96GA3 475 aaPredicted RBP21.07■□□□□ 0.96
SCARB1-205ENST00000538291 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
SCARB1-205ENST00000538291 TRIM6-TRIM34B2RNG4 842 aa21.06■□□□□ 0.96
SCARB1-205ENST00000538291 CCDC88BA6NC98 1476 aa21.05■□□□□ 0.96
SCARB1-205ENST00000538291 HSP90B1P14625 803 aaKnown RBP21.04■□□□□ 0.96
SCARB1-205ENST00000538291 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.962e-8■□□□□ 8.6
SCARB1-205ENST00000538291 NUTM2FA1L443 756 aa21.04■□□□□ 0.96
SCARB1-205ENST00000538291 FRAT2O75474 233 aaPredicted RBP21.03■□□□□ 0.96
SCARB1-205ENST00000538291 RTN4Q9NQC3 1192 aaKnown RBP21.03■□□□□ 0.96
SCARB1-205ENST00000538291 SYAP1Q96A49 352 aaPredicted RBP21.02■□□□□ 0.96
SCARB1-205ENST00000538291 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
SCARB1-205ENST00000538291 TPM4P67936 248 aa21.01■□□□□ 0.95
SCARB1-205ENST00000538291 NLRP13Q86W25 1043 aa21■□□□□ 0.95
SCARB1-205ENST00000538291 TRAK1Q9UPV9 953 aa21■□□□□ 0.95
SCARB1-205ENST00000538291 TCERG1O14776 1098 aaKnown RBP21■□□□□ 0.95
SCARB1-205ENST00000538291 L3MBTL2Q969R5 705 aa21■□□□□ 0.95
SCARB1-205ENST00000538291 JPH4Q96JJ6 628 aa21■□□□□ 0.95
SCARB1-205ENST00000538291 RASSF8Q8NHQ8 419 aa20.99■□□□□ 0.95
SCARB1-205ENST00000538291 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms