RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 POTEJP0CG39 1038 aa9.97□□□□□ -0.81
SNHG1-207ENST00000537965 ILDR1Q86SU0 546 aaPredicted RBP9.96□□□□□ -0.82
SNHG1-207ENST00000537965 BCL11BQ9C0K0 894 aaPredicted RBP9.96□□□□□ -0.82
SNHG1-207ENST00000537965 URB2Q14146 1524 aaKnown RBP9.96□□□□□ -0.82
SNHG1-207ENST00000537965 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
SNHG1-207ENST00000537965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.95□□□□□ -0.82
SNHG1-207ENST00000537965 STK25O00506 426 aa9.94□□□□□ -0.82
SNHG1-207ENST00000537965 PDCD7Q8N8D1 485 aaKnown RBP9.94□□□□□ -0.82
SNHG1-207ENST00000537965 OTUD5Q96G74 571 aa9.93□□□□□ -0.82
SNHG1-207ENST00000537965 STK24Q9Y6E0 443 aa9.93□□□□□ -0.82
SNHG1-207ENST00000537965 AMER1Q5JTC6 1135 aaPredicted RBP9.92□□□□□ -0.82
SNHG1-207ENST00000537965 ABCC8Q09428 1581 aa9.92□□□□□ -0.82
SNHG1-207ENST00000537965 IFT140Q96RY7 1462 aa9.91□□□□□ -0.82
SNHG1-207ENST00000537965 SOX12O15370 315 aa9.91□□□□□ -0.82
SNHG1-207ENST00000537965 MAMSTRQ6ZN01 415 aa9.91□□□□□ -0.82
SNHG1-207ENST00000537965 RIMBP3CA6NJZ7 1639 aa9.89□□□□□ -0.83
SNHG1-207ENST00000537965 RIMBP3BA6NNM3 1639 aa9.89□□□□□ -0.83
SNHG1-207ENST00000537965 RIMBP3Q9UFD9 1639 aa9.89□□□□□ -0.83
SNHG1-207ENST00000537965 HS6ST3Q8IZP7 471 aa9.87□□□□□ -0.83
SNHG1-207ENST00000537965 SCUBE2Q9NQ36 999 aa9.87□□□□□ -0.83
SNHG1-207ENST00000537965 RTN4Q9NQC3 1192 aaKnown RBP9.87□□□□□ -0.83
SNHG1-207ENST00000537965 CCDC88BA6NC98 1476 aa9.86□□□□□ -0.83
SNHG1-207ENST00000537965 L3MBTL3Q96JM7 780 aaPredicted RBP9.86□□□□□ -0.83
SNHG1-207ENST00000537965 TOPBP1Q92547 1522 aa9.86□□□□□ -0.83
SNHG1-207ENST00000537965 DPY19L2Q6NUT2 758 aa9.85□□□□□ -0.83
SNHG1-207ENST00000537965 ZNF608Q9ULD9 1512 aaPredicted RBP9.84□□□□□ -0.83
SNHG1-207ENST00000537965 CHGAP10645 457 aaKnown RBP9.84□□□□□ -0.83
SNHG1-207ENST00000537965 PHF8Q9UPP1 1060 aa9.84□□□□□ -0.83
SNHG1-207ENST00000537965 ARHGEF11O15085 1522 aa9.83□□□□□ -0.84
SNHG1-207ENST00000537965 NLRP6P59044 892 aa9.83□□□□□ -0.84
SNHG1-207ENST00000537965 DNMBPQ6XZF7 1577 aa9.83□□□□□ -0.84
SNHG1-207ENST00000537965 FBXO22Q8NEZ5 403 aa9.82□□□□□ -0.84
SNHG1-207ENST00000537965 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
SNHG1-207ENST00000537965 MFRPQ9BY79 579 aa9.82□□□□□ -0.84
SNHG1-207ENST00000537965 EIF4G3O43432 1585 aaKnown RBP9.82□□□□□ -0.84
SNHG1-207ENST00000537965 CHD1O14646 1710 aa9.82□□□□□ -0.84
SNHG1-207ENST00000537965 CYB5RLQ6IPT4 315 aa9.79□□□□□ -0.84
SNHG1-207ENST00000537965 BOLA1Q9Y3E2 137 aa9.79□□□□□ -0.84
SNHG1-207ENST00000537965 TARBP1Q13395 1621 aaKnown RBP9.78□□□□□ -0.84
SNHG1-207ENST00000537965 TMEM121BQ9BXQ6 578 aaPredicted RBP9.77□□□□□ -0.85
SNHG1-207ENST00000537965 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.77□□□□□ -0.85
SNHG1-207ENST00000537965 G3V3G9 751 aa9.76□□□□□ -0.85
SNHG1-207ENST00000537965 AQRO60306 1485 aaKnown RBP eCLIP9.76□□□□□ -0.855e-14■■■■■ 43.1
SNHG1-207ENST00000537965 C3orf67Q6ZVT6 689 aa9.75□□□□□ -0.85
SNHG1-207ENST00000537965 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
SNHG1-207ENST00000537965 SLAIN1Q8ND83 568 aa9.74□□□□□ -0.85
SNHG1-207ENST00000537965 POLA1P09884 1462 aaPredicted RBP9.73□□□□□ -0.85
SNHG1-207ENST00000537965 SOGA1O94964 1423 aa9.73□□□□□ -0.85
SNHG1-207ENST00000537965 NKX1-1Q15270 411 aaPredicted RBP9.72□□□□□ -0.85
SNHG1-207ENST00000537965 MICALL2Q8IY33 904 aa9.72□□□□□ -0.85
SNHG1-207ENST00000537965 CHMP7Q8WUX9 453 aaPredicted RBP9.7□□□□□ -0.86
SNHG1-207ENST00000537965 ARAP1Q96P48 1450 aa9.7□□□□□ -0.86
SNHG1-207ENST00000537965 SYNJ1O43426 1573 aa9.69□□□□□ -0.86
SNHG1-207ENST00000537965 MAGI1Q96QZ7 1491 aaPredicted RBP9.68□□□□□ -0.86
SNHG1-207ENST00000537965 TDRD9Q8NDG6 1382 aaKnown RBP9.68□□□□□ -0.86
SNHG1-207ENST00000537965 RAD54L2Q9Y4B4 1467 aa9.67□□□□□ -0.86
SNHG1-207ENST00000537965 PPP1R37O75864 691 aa9.67□□□□□ -0.86
SNHG1-207ENST00000537965 RYDENQ9NUL5 291 aaKnown RBP9.67□□□□□ -0.86
SNHG1-207ENST00000537965 GRIN2BQ13224 1484 aa9.66□□□□□ -0.86
SNHG1-207ENST00000537965 SNAPC4Q5SXM2 1469 aa9.66□□□□□ -0.86
SNHG1-207ENST00000537965 FGD5Q6ZNL6 1462 aa9.66□□□□□ -0.86
SNHG1-207ENST00000537965 CLASP1Q7Z460 1538 aa9.64□□□□□ -0.87
SNHG1-207ENST00000537965 SYNJ2O15056 1496 aa9.63□□□□□ -0.87
SNHG1-207ENST00000537965 PBRM1Q86U86 1689 aa9.63□□□□□ -0.87
SNHG1-207ENST00000537965 GTPBP6O43824 516 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-207ENST00000537965 TMEM92Q6UXU6 159 aa9.62□□□□□ -0.87
SNHG1-207ENST00000537965 CUX1P39880 1505 aa9.61□□□□□ -0.87
SNHG1-207ENST00000537965 BBXQ8WY36 941 aaPredicted RBP9.61□□□□□ -0.87
SNHG1-207ENST00000537965 GAPVD1Q14C86 1478 aa9.6□□□□□ -0.87
SNHG1-207ENST00000537965 SNPHO15079 494 aa9.6□□□□□ -0.87
SNHG1-207ENST00000537965 FAM163AQ96GL9 167 aaPredicted RBP9.59□□□□□ -0.87
SNHG1-207ENST00000537965 ABCA10Q8WWZ4 1543 aa9.56□□□□□ -0.88
SNHG1-207ENST00000537965 LCE2DQ5TA82 110 aaPredicted RBP9.56□□□□□ -0.88
SNHG1-207ENST00000537965 KIF3CO14782 793 aa9.55□□□□□ -0.88
SNHG1-207ENST00000537965 ABCA5Q8WWZ7 1642 aa9.55□□□□□ -0.88
SNHG1-207ENST00000537965 ST18O60284 1047 aa9.53□□□□□ -0.88
SNHG1-207ENST00000537965 WRNQ14191 1432 aaPredicted RBP eCLIP9.53□□□□□ -0.88
SNHG1-207ENST00000537965 C2orf72A6NCS6 295 aa9.52□□□□□ -0.89
SNHG1-207ENST00000537965 HOXB3P14651 431 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-207ENST00000537965 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.52□□□□□ -0.89
SNHG1-207ENST00000537965 TMC2Q8TDI7 906 aa9.51□□□□□ -0.89
SNHG1-207ENST00000537965 GRIN2AQ12879 1464 aa9.51□□□□□ -0.89
SNHG1-207ENST00000537965 DOK7Q18PE1 504 aa9.49□□□□□ -0.89
SNHG1-207ENST00000537965 SPRYD3Q8NCJ5 442 aa9.49□□□□□ -0.89
SNHG1-207ENST00000537965 BIVM-ERCC5R4GMW8 1640 aa9.49□□□□□ -0.89
SNHG1-207ENST00000537965 GPHNQ9NQX3 736 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-207ENST00000537965 ADAMTS12P58397 1594 aa9.48□□□□□ -0.89
SNHG1-207ENST00000537965 CEP170Q5SW79 1584 aa9.48□□□□□ -0.89
SNHG1-207ENST00000537965 TOP2BQ02880 1626 aa9.48□□□□□ -0.89
SNHG1-207ENST00000537965 FHAD1B1AJZ9 1412 aa9.48□□□□□ -0.89
SNHG1-207ENST00000537965 NUP160Q12769 1436 aa9.48□□□□□ -0.89
SNHG1-207ENST00000537965 SHROOM2Q13796 1616 aa9.47□□□□□ -0.89
SNHG1-207ENST00000537965 POTEMA6NI47 508 aa9.47□□□□□ -0.89
SNHG1-207ENST00000537965 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
SNHG1-207ENST00000537965 ERICH3Q5RHP9 1530 aa9.46□□□□□ -0.89
SNHG1-207ENST00000537965 SUPT5HO00267 1087 aaKnown RBP9.46□□□□□ -0.9
SNHG1-207ENST00000537965 KIF13AQ9H1H9 1805 aa9.45□□□□□ -0.9
SNHG1-207ENST00000537965 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
SNHG1-207ENST00000537965 RIMBP2O15034 1052 aa9.44□□□□□ -0.9
SNHG1-207ENST00000537965 CRISPLD2Q9H0B8 497 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms