RNA–Protein interactions for RNA: ENST00000536461.5

KDM4B-203, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 5,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-203ENST00000536461 TNNT2P45379 298 aaPredicted RBP21.08■□□□□ 0.97
KDM4B-203ENST00000536461 CCDC18Q5T9S5 1454 aa21.08■□□□□ 0.96
KDM4B-203ENST00000536461 TSHZ2Q9NRE2 1034 aa21.07■□□□□ 0.96
KDM4B-203ENST00000536461 SOX12O15370 315 aa21.07■□□□□ 0.96
KDM4B-203ENST00000536461 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
KDM4B-203ENST00000536461 FAM69CQ0P6D2 419 aa21.06■□□□□ 0.96
KDM4B-203ENST00000536461 NPHP1O15259 732 aa21.05■□□□□ 0.96
KDM4B-203ENST00000536461 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
KDM4B-203ENST00000536461 BECN1Q14457 450 aa21.04■□□□□ 0.96
KDM4B-203ENST00000536461 LAS1LQ9Y4W2 734 aaKnown RBP21.03■□□□□ 0.96
KDM4B-203ENST00000536461 ERICH6BQ5W0A0 696 aa21.03■□□□□ 0.96
KDM4B-203ENST00000536461 U2SURPO15042 1029 aaKnown RBP21.01■□□□□ 0.95
KDM4B-203ENST00000536461 NEUROD2Q15784 382 aa21.01■□□□□ 0.95
KDM4B-203ENST00000536461 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
KDM4B-203ENST00000536461 PAK3O75914 559 aaPredicted RBP21■□□□□ 0.95
KDM4B-203ENST00000536461 B4GALNT3Q6L9W6 998 aa21■□□□□ 0.95
KDM4B-203ENST00000536461 HDGFL2Q7Z4V5 671 aaPredicted RBP21■□□□□ 0.95
KDM4B-203ENST00000536461 PNNQ9H307 717 aaKnown RBP20.99■□□□□ 0.95
KDM4B-203ENST00000536461 CCER2I3L3R5 266 aa20.99■□□□□ 0.95
KDM4B-203ENST00000536461 FOXD1Q16676 465 aa20.97■□□□□ 0.95
KDM4B-203ENST00000536461 RAD54L2Q9Y4B4 1467 aa20.97■□□□□ 0.95
KDM4B-203ENST00000536461 TRIM44Q96DX7 344 aaPredicted RBP20.97■□□□□ 0.95
KDM4B-203ENST00000536461 MPHOSPH9Q99550 1183 aa20.97■□□□□ 0.95
KDM4B-203ENST00000536461 CC2D1BQ5T0F9 858 aaKnown RBP20.96■□□□□ 0.95
KDM4B-203ENST00000536461 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.957e-7■■■■□ 19.5
KDM4B-203ENST00000536461 MORC1Q86VD1 984 aa20.93■□□□□ 0.94
KDM4B-203ENST00000536461 CSB-PGBD3P0DP91 1061 aa20.92■□□□□ 0.94
KDM4B-203ENST00000536461 SENP3-EIF4A1A0A087X0R7 540 aa20.91■□□□□ 0.94
KDM4B-203ENST00000536461 IGF1RP08069 1367 aa20.9■□□□□ 0.94
KDM4B-203ENST00000536461 CHMP4BQ9H444 224 aaKnown RBP20.89■□□□□ 0.94
KDM4B-203ENST00000536461 RAB3GAP2Q9H2M9 1393 aa20.88■□□□□ 0.93
KDM4B-203ENST00000536461 MS4A1P11836 297 aa20.88■□□□□ 0.93
KDM4B-203ENST00000536461 NUTM2DQ5VT03 806 aaPredicted RBP20.88■□□□□ 0.93
KDM4B-203ENST00000536461 CCDC9Q9Y3X0 531 aaKnown RBP20.88■□□□□ 0.93
KDM4B-203ENST00000536461 FTSJ3Q8IY81 847 aaKnown RBP20.85■□□□□ 0.93
KDM4B-203ENST00000536461 NAP1L5Q96NT1 182 aaPredicted RBP20.85■□□□□ 0.93
KDM4B-203ENST00000536461 NGDNQ8NEJ9 315 aaKnown RBP20.84■□□□□ 0.93
KDM4B-203ENST00000536461 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.93
KDM4B-203ENST00000536461 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
KDM4B-203ENST00000536461 MRC2Q9UBG0 1479 aa20.83■□□□□ 0.92
KDM4B-203ENST00000536461 ROCK2O75116 1388 aaKnown RBP20.82■□□□□ 0.92
KDM4B-203ENST00000536461 HSPA5P11021 654 aaKnown RBP20.82■□□□□ 0.92
KDM4B-203ENST00000536461 RTF1Q92541 710 aaKnown RBP20.81■□□□□ 0.92
KDM4B-203ENST00000536461 EIF3AQ14152 1382 aaKnown RBP20.79■□□□□ 0.92
KDM4B-203ENST00000536461 GOLGA6L22H0YM25 854 aa20.79■□□□□ 0.92
KDM4B-203ENST00000536461 NESP48681 1621 aa20.79■□□□□ 0.92
KDM4B-203ENST00000536461 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
KDM4B-203ENST00000536461 CASC1Q6TDU7 716 aa20.77■□□□□ 0.92
KDM4B-203ENST00000536461 VGFO15240 615 aaPredicted RBP20.76■□□□□ 0.91
KDM4B-203ENST00000536461 RUSC2Q8N2Y8 1516 aa20.76■□□□□ 0.91
KDM4B-203ENST00000536461 CFTRP13569 1480 aa20.75■□□□□ 0.91
KDM4B-203ENST00000536461 NUTM2FA1L443 756 aa20.74■□□□□ 0.91
KDM4B-203ENST00000536461 IFT140Q96RY7 1462 aa20.74■□□□□ 0.91
KDM4B-203ENST00000536461 RGS3P49796 1198 aa20.74■□□□□ 0.91
KDM4B-203ENST00000536461 KTN1Q86UP2 1357 aaKnown RBP20.74■□□□□ 0.91
KDM4B-203ENST00000536461 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
KDM4B-203ENST00000536461 RALBP1Q15311 655 aa20.71■□□□□ 0.91
KDM4B-203ENST00000536461 NCLP19338 710 aaKnown RBP20.71■□□□□ 0.91
KDM4B-203ENST00000536461 FRAT1Q92837 279 aaPredicted RBP20.7■□□□□ 0.9
KDM4B-203ENST00000536461 TRAK1Q9UPV9 953 aa20.7■□□□□ 0.9
KDM4B-203ENST00000536461 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
KDM4B-203ENST00000536461 OS9Q13438 667 aaPredicted RBP20.69■□□□□ 0.9
KDM4B-203ENST00000536461 GOLGA2Q08379 1002 aa20.68■□□□□ 0.9
KDM4B-203ENST00000536461 CCDC144AA2RUR9 1427 aa20.67■□□□□ 0.9
KDM4B-203ENST00000536461 UACAQ9BZF9 1416 aa20.66■□□□□ 0.9
KDM4B-203ENST00000536461 L3MBTL2Q969R5 705 aa20.66■□□□□ 0.9
KDM4B-203ENST00000536461 U2AF1L5P0DN76 240 aaPredicted RBP20.66■□□□□ 0.9
KDM4B-203ENST00000536461 U2AF1Q01081 240 aaKnown RBP eCLIP20.66■□□□□ 0.9
KDM4B-203ENST00000536461 AMPHP49418 695 aa20.64■□□□□ 0.9
KDM4B-203ENST00000536461 L1TD1Q5T7N2 865 aaKnown RBP20.63■□□□□ 0.89
KDM4B-203ENST00000536461 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.63■□□□□ 0.89
KDM4B-203ENST00000536461 HMGXB3Q12766 1538 aa20.62■□□□□ 0.89
KDM4B-203ENST00000536461 ZNF330Q9Y3S2 320 aaPredicted RBP20.62■□□□□ 0.89
KDM4B-203ENST00000536461 PTMAP06454 111 aaKnown RBP20.62■□□□□ 0.89
KDM4B-203ENST00000536461 CHMP4AQ9BY43 222 aa20.61■□□□□ 0.89
KDM4B-203ENST00000536461 CALD1Q05682 793 aaKnown RBP20.61■□□□□ 0.89
KDM4B-203ENST00000536461 IPO9Q96P70 1041 aaKnown RBP20.6■□□□□ 0.89
KDM4B-203ENST00000536461 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.59■□□□□ 0.89
KDM4B-203ENST00000536461 MYOM3Q5VTT5 1437 aa20.59■□□□□ 0.89
KDM4B-203ENST00000536461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.58■□□□□ 0.89
KDM4B-203ENST00000536461 CFAP44Q96MT7 982 aa20.58■□□□□ 0.88
KDM4B-203ENST00000536461 DNTTIP2Q5QJE6 756 aaKnown RBP20.58■□□□□ 0.88
KDM4B-203ENST00000536461 LTV1Q96GA3 475 aaPredicted RBP20.57■□□□□ 0.88
KDM4B-203ENST00000536461 SYNJ2O15056 1496 aa20.57■□□□□ 0.88
KDM4B-203ENST00000536461 TCERG1O14776 1098 aaKnown RBP20.56■□□□□ 0.88
KDM4B-203ENST00000536461 TOPBP1Q92547 1522 aa20.56■□□□□ 0.88
KDM4B-203ENST00000536461 AFAP1Q8N556 730 aa20.55■□□□□ 0.88
KDM4B-203ENST00000536461 DHX57Q6P158 1386 aaKnown RBP20.55■□□□□ 0.88
KDM4B-203ENST00000536461 TMX4Q9H1E5 349 aaPredicted RBP20.54■□□□□ 0.88
KDM4B-203ENST00000536461 EVA1CP58658 441 aa20.54■□□□□ 0.88
KDM4B-203ENST00000536461 ZNF644Q9H582 1327 aaPredicted RBP20.52■□□□□ 0.88
KDM4B-203ENST00000536461 IPO8O15397 1037 aaKnown RBP20.52■□□□□ 0.87
KDM4B-203ENST00000536461 KIF15Q9NS87 1388 aa20.51■□□□□ 0.87
KDM4B-203ENST00000536461 EVC2Q86UK5 1308 aa20.51■□□□□ 0.87
KDM4B-203ENST00000536461 ATF3P18847 181 aa20.51■□□□□ 0.87
KDM4B-203ENST00000536461 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
KDM4B-203ENST00000536461 PHLDB1Q86UU1 1377 aa20.5■□□□□ 0.87
KDM4B-203ENST00000536461 MINK1Q8N4C8 1332 aaPredicted RBP20.5■□□□□ 0.87
KDM4B-203ENST00000536461 MEX3CQ5U5Q3 659 aaKnown RBP20.5■□□□□ 0.87
KDM4B-203ENST00000536461 NLRP13Q86W25 1043 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms