RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 CERS3Q8IU89 383 aa9.08□□□□□ -0.96
CHEK1-216ENST00000534070 TRAIPQ9BWF2 469 aa9.06□□□□□ -0.96
CHEK1-216ENST00000534070 PPARGC1BQ86YN6 1023 aaKnown RBP9.05□□□□□ -0.96
CHEK1-216ENST00000534070 CUX2O14529 1486 aa9.04□□□□□ -0.96
CHEK1-216ENST00000534070 ZMYND10O75800 440 aa9.04□□□□□ -0.96
CHEK1-216ENST00000534070 POLA2Q14181 598 aa9.04□□□□□ -0.96
CHEK1-216ENST00000534070 ARID4BQ4LE39 1312 aaPredicted RBP9.04□□□□□ -0.96
CHEK1-216ENST00000534070 KDM4AO75164 1064 aa9.04□□□□□ -0.96
CHEK1-216ENST00000534070 SHROOM2Q13796 1616 aa9.03□□□□□ -0.96
CHEK1-216ENST00000534070 ABCA5Q8WWZ7 1642 aa9.03□□□□□ -0.96
CHEK1-216ENST00000534070 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
CHEK1-216ENST00000534070 CARNS1A5YM72 827 aa9.02□□□□□ -0.97
CHEK1-216ENST00000534070 MYT1LQ9UL68 1186 aa9.02□□□□□ -0.97
CHEK1-216ENST00000534070 TRAK2O60296 914 aa9.01□□□□□ -0.97
CHEK1-216ENST00000534070 STK25O00506 426 aa9□□□□□ -0.97
CHEK1-216ENST00000534070 NEFLP07196 543 aa9□□□□□ -0.97
CHEK1-216ENST00000534070 ZNF219Q9P2Y4 722 aaPredicted RBP8.99□□□□□ -0.97
CHEK1-216ENST00000534070 SMARCA5O60264 1052 aaPredicted RBP8.98□□□□□ -0.97
CHEK1-216ENST00000534070 CFTRP13569 1480 aa8.98□□□□□ -0.97
CHEK1-216ENST00000534070 UNCXA6NJT0 531 aa8.97□□□□□ -0.97
CHEK1-216ENST00000534070 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.96□□□□□ -0.98
CHEK1-216ENST00000534070 PBRM1Q86U86 1689 aa8.96□□□□□ -0.98
CHEK1-216ENST00000534070 POM121Q96HA1 1249 aa8.95□□□□□ -0.98
CHEK1-216ENST00000534070 BAZ1BQ9UIG0 1483 aaKnown RBP8.95□□□□□ -0.98
CHEK1-216ENST00000534070 RSPH4AQ5TD94 716 aa8.94□□□□□ -0.98
CHEK1-216ENST00000534070 CECR2Q9BXF3 1484 aa8.94□□□□□ -0.98
CHEK1-216ENST00000534070 ONECUT3O60422 494 aaPredicted RBP8.93□□□□□ -0.98
CHEK1-216ENST00000534070 PSMD1Q99460 953 aa8.92□□□□□ -0.98
CHEK1-216ENST00000534070 PRDM16Q9HAZ2 1276 aa8.91□□□□□ -0.98
CHEK1-216ENST00000534070 PLEKHG3A1L390 1219 aa8.9□□□□□ -0.98
CHEK1-216ENST00000534070 MIER1Q8N108 512 aa8.89□□□□□ -0.99
CHEK1-216ENST00000534070 PDE4DQ08499 809 aa8.89□□□□□ -0.99
CHEK1-216ENST00000534070 DNMBPQ6XZF7 1577 aa8.88□□□□□ -0.99
CHEK1-216ENST00000534070 BARGINQ6ZT62 677 aa8.88□□□□□ -0.99
CHEK1-216ENST00000534070 PRDM10Q9NQV6 1147 aa8.88□□□□□ -0.99
CHEK1-216ENST00000534070 BCCIPQ9P287 314 aaKnown RBP eCLIP8.88□□□□□ -0.99
CHEK1-216ENST00000534070 HOXD11P31277 338 aaPredicted RBP8.88□□□□□ -0.99
CHEK1-216ENST00000534070 CCDC27Q2M243 656 aa8.88□□□□□ -0.99
CHEK1-216ENST00000534070 CCDC97Q96F63 343 aaPredicted RBP8.88□□□□□ -0.99
CHEK1-216ENST00000534070 TESPA1A2RU30 521 aaPredicted RBP8.87□□□□□ -0.99
CHEK1-216ENST00000534070 KRI1Q8N9T8 703 aaKnown RBP8.87□□□□□ -0.99
CHEK1-216ENST00000534070 PKNOX2Q96KN3 472 aa8.87□□□□□ -0.99
CHEK1-216ENST00000534070 TICAM2Q86XR7 235 aa8.87□□□□□ -0.99
CHEK1-216ENST00000534070 TOP2BQ02880 1626 aa8.87□□□□□ -0.99
CHEK1-216ENST00000534070 RBM26Q5T8P6 1007 aaKnown RBP8.86□□□□□ -0.99
CHEK1-216ENST00000534070 CCDC125Q86Z20 511 aa8.86□□□□□ -0.99
CHEK1-216ENST00000534070 RSF1Q96T23 1441 aaPredicted RBP8.86□□□□□ -0.99
CHEK1-216ENST00000534070 CLASP1Q7Z460 1538 aa8.86□□□□□ -0.99
CHEK1-216ENST00000534070 AK7Q96M32 723 aa8.85□□□□□ -0.99
CHEK1-216ENST00000534070 FGD1P98174 961 aa8.84□□□□□ -0.99
CHEK1-216ENST00000534070 PCGF6Q9BYE7 350 aa8.83□□□□□ -1
CHEK1-216ENST00000534070 TRIM66O15016 1216 aa8.83□□□□□ -1
CHEK1-216ENST00000534070 PPP1R1BQ9UD71 204 aaPredicted RBP8.83□□□□□ -1
CHEK1-216ENST00000534070 STK24Q9Y6E0 443 aa8.83□□□□□ -1
CHEK1-216ENST00000534070 FLIIQ13045 1269 aa8.82□□□□□ -1
CHEK1-216ENST00000534070 ACIN1Q9UKV3 1341 aaKnown RBP8.8□□□□□ -1
CHEK1-216ENST00000534070 A6NJR5 290 aa8.8□□□□□ -1
CHEK1-216ENST00000534070 BRD1O95696 1058 aa8.79□□□□□ -1
CHEK1-216ENST00000534070 MCM6Q14566 821 aa8.79□□□□□ -1
CHEK1-216ENST00000534070 PROSER2Q86WR7 435 aaPredicted RBP8.79□□□□□ -1
CHEK1-216ENST00000534070 ARIH1Q9Y4X5 557 aaPredicted RBP8.77□□□□□ -1.01
CHEK1-216ENST00000534070 U3KPZ7 1027 aaPredicted RBP8.76□□□□□ -1.01
CHEK1-216ENST00000534070 ZEB1P37275 1124 aaPredicted RBP8.76□□□□□ -1.01
CHEK1-216ENST00000534070 RIOK3O14730 519 aaKnown RBP8.75□□□□□ -1.01
CHEK1-216ENST00000534070 CLSTN1O94985 981 aa8.75□□□□□ -1.01
CHEK1-216ENST00000534070 KIAA1522Q9P206 1035 aaPredicted RBP8.75□□□□□ -1.01
CHEK1-216ENST00000534070 CADPSQ9ULU8 1353 aa8.75□□□□□ -1.01
CHEK1-216ENST00000534070 ZNF662Q6ZS27 426 aa8.75□□□□□ -1.01
CHEK1-216ENST00000534070 SERPINA10Q9UK55 444 aa8.74□□□□□ -1.01
CHEK1-216ENST00000534070 FOSBP53539 338 aa8.74□□□□□ -1.01
CHEK1-216ENST00000534070 NOL8Q76FK4 1167 aaKnown RBP8.74□□□□□ -1.01
CHEK1-216ENST00000534070 EIF4G3O43432 1585 aaKnown RBP8.73□□□□□ -1.01
CHEK1-216ENST00000534070 FNBP4Q8N3X1 1017 aaPredicted RBP8.73□□□□□ -1.01
CHEK1-216ENST00000534070 IVNS1ABPQ9Y6Y0 642 aa8.73□□□□□ -1.01
CHEK1-216ENST00000534070 ARHGEF1Q92888 912 aaKnown RBP8.73□□□□□ -1.01
CHEK1-216ENST00000534070 NESP48681 1621 aa8.73□□□□□ -1.01
CHEK1-216ENST00000534070 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.72□□□□□ -1.01
CHEK1-216ENST00000534070 ABCC8Q09428 1581 aa8.72□□□□□ -1.01
CHEK1-216ENST00000534070 URB2Q14146 1524 aaKnown RBP8.72□□□□□ -1.01
CHEK1-216ENST00000534070 CHD1O14646 1710 aa8.72□□□□□ -1.01
CHEK1-216ENST00000534070 MLLT3P42568 568 aaPredicted RBP8.72□□□□□ -1.01
CHEK1-216ENST00000534070 SIRT1Q96EB6 747 aa8.72□□□□□ -1.01
CHEK1-216ENST00000534070 PLSCR2Q9NRY7 297 aa8.72□□□□□ -1.01
CHEK1-216ENST00000534070 IGSF5Q9NSI5 407 aa8.71□□□□□ -1.01
CHEK1-216ENST00000534070 CUL7Q14999 1698 aa8.71□□□□□ -1.01
CHEK1-216ENST00000534070 CC2D2BQ6DHV5 1058 aa8.71□□□□□ -1.02
CHEK1-216ENST00000534070 NEUROD1Q13562 356 aa8.7□□□□□ -1.02
CHEK1-216ENST00000534070 MRC2Q9UBG0 1479 aa8.7□□□□□ -1.02
CHEK1-216ENST00000534070 E2F4Q16254 413 aa8.7□□□□□ -1.02
CHEK1-216ENST00000534070 GPIHBP1Q8IV16 184 aa8.7□□□□□ -1.02
CHEK1-216ENST00000534070 ADAMTS12P58397 1594 aa8.69□□□□□ -1.02
CHEK1-216ENST00000534070 NAP1L5Q96NT1 182 aaPredicted RBP8.68□□□□□ -1.02
CHEK1-216ENST00000534070 MARCH6O60337 910 aa8.68□□□□□ -1.02
CHEK1-216ENST00000534070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.68□□□□□ -1.022e-7■■□□□ 11.9
CHEK1-216ENST00000534070 RFX1P22670 979 aa8.68□□□□□ -1.02
CHEK1-216ENST00000534070 SKIV2LQ15477 1246 aaKnown RBP8.68□□□□□ -1.02
CHEK1-216ENST00000534070 DCAF8L1A6NGE4 600 aa8.67□□□□□ -1.02
CHEK1-216ENST00000534070 MRRFQ96E11 262 aaKnown RBP8.67□□□□□ -1.02
CHEK1-216ENST00000534070 SPATA32Q96LK8 384 aa8.67□□□□□ -1.02
CHEK1-216ENST00000534070 CTTNBP2Q8WZ74 1663 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms