RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 POGZQ7Z3K3 1410 aa14.38□□□□□ -0.11
COPB1-210ENST00000533533 SIGLEC1Q9BZZ2 1709 aa14.38□□□□□ -0.11
COPB1-210ENST00000533533 MAGI2Q86UL8 1455 aa14.38□□□□□ -0.11
COPB1-210ENST00000533533 ADRA2BP18089 450 aa14.37□□□□□ -0.11
COPB1-210ENST00000533533 YEATS2Q9ULM3 1422 aa14.37□□□□□ -0.11
COPB1-210ENST00000533533 PLCH2O75038 1416 aa14.36□□□□□ -0.11
COPB1-210ENST00000533533 HECW1Q76N89 1606 aa14.36□□□□□ -0.11
COPB1-210ENST00000533533 SCAPERQ9BY12 1400 aa14.35□□□□□ -0.11
COPB1-210ENST00000533533 FMN1Q68DA7 1419 aa14.34□□□□□ -0.11
COPB1-210ENST00000533533 UBTFP17480 764 aaKnown RBP14.34□□□□□ -0.11
COPB1-210ENST00000533533 MYO5CQ9NQX4 1742 aa14.33□□□□□ -0.12
COPB1-210ENST00000533533 FER1L4A9Z1Z3 1794 aa14.33□□□□□ -0.12
COPB1-210ENST00000533533 ATP1B4Q9UN42 357 aaPredicted RBP14.33□□□□□ -0.12
COPB1-210ENST00000533533 HSPA2P54652 639 aa14.32□□□□□ -0.12
COPB1-210ENST00000533533 MLECQ14165 292 aa14.32□□□□□ -0.12
COPB1-210ENST00000533533 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
COPB1-210ENST00000533533 ARHGAP35Q9NRY4 1499 aa14.31□□□□□ -0.12
COPB1-210ENST00000533533 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
COPB1-210ENST00000533533 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
COPB1-210ENST00000533533 ATP10AO60312 1499 aa14.3□□□□□ -0.12
COPB1-210ENST00000533533 KIF14Q15058 1648 aa14.29□□□□□ -0.12
COPB1-210ENST00000533533 C9orf84Q5VXU9 1444 aa14.28□□□□□ -0.12
COPB1-210ENST00000533533 ARHGEF12Q9NZN5 1544 aa14.27□□□□□ -0.12
COPB1-210ENST00000533533 TROQ12816 1431 aaPredicted RBP14.27□□□□□ -0.12
COPB1-210ENST00000533533 SETD1BQ9UPS6 1966 aaKnown RBP14.26□□□□□ -0.13
COPB1-210ENST00000533533 LRRIQ1Q96JM4 1722 aa14.26□□□□□ -0.13
COPB1-210ENST00000533533 ZNF518AQ6AHZ1 1483 aa14.25□□□□□ -0.13
COPB1-210ENST00000533533 ARHGAP5Q13017 1502 aa14.25□□□□□ -0.13
COPB1-210ENST00000533533 CLIP1P30622 1438 aa14.24□□□□□ -0.13
COPB1-210ENST00000533533 AFAP1Q8N556 730 aa14.24□□□□□ -0.13
COPB1-210ENST00000533533 KDM5CP41229 1560 aa14.24□□□□□ -0.13
COPB1-210ENST00000533533 PREX1Q8TCU6 1659 aa14.23□□□□□ -0.13
COPB1-210ENST00000533533 CDC42BPBQ9Y5S2 1711 aa14.23□□□□□ -0.13
COPB1-210ENST00000533533 CEBPAP49715 358 aaPredicted RBP14.21□□□□□ -0.13
COPB1-210ENST00000533533 CERKQ8TCT0 537 aa14.2□□□□□ -0.14
COPB1-210ENST00000533533 DIP2CQ9Y2E4 1556 aa14.2□□□□□ -0.14
COPB1-210ENST00000533533 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
COPB1-210ENST00000533533 REREQ9P2R6 1566 aa14.18□□□□□ -0.14
COPB1-210ENST00000533533 PREX2Q70Z35 1606 aa14.18□□□□□ -0.14
COPB1-210ENST00000533533 MLH3Q9UHC1 1453 aa14.18□□□□□ -0.14
COPB1-210ENST00000533533 CASKIN1Q8WXD9 1431 aa14.17□□□□□ -0.14
COPB1-210ENST00000533533 ABCA6Q8N139 1617 aa14.17□□□□□ -0.14
COPB1-210ENST00000533533 CCDC18Q5T9S5 1454 aa14.17□□□□□ -0.14
COPB1-210ENST00000533533 STRCQ7RTU9 1775 aa14.17□□□□□ -0.14
COPB1-210ENST00000533533 ABCC1P33527 1531 aa14.16□□□□□ -0.14
COPB1-210ENST00000533533 TRAPPC8Q9Y2L5 1435 aa14.15□□□□□ -0.14
COPB1-210ENST00000533533 ITSN2Q9NZM3 1697 aa14.15□□□□□ -0.14
COPB1-210ENST00000533533 CDC42BPAQ5VT25 1732 aa14.15□□□□□ -0.14
COPB1-210ENST00000533533 AGLP35573 1532 aa14.15□□□□□ -0.14
COPB1-210ENST00000533533 UHRF1BP1Q6BDS2 1440 aa14.15□□□□□ -0.14
COPB1-210ENST00000533533 C3P01024 1663 aa14.14□□□□□ -0.15
COPB1-210ENST00000533533 DMRT2Q9Y5R5 561 aa14.14□□□□□ -0.15
COPB1-210ENST00000533533 KIDINS220Q9ULH0 1771 aa14.13□□□□□ -0.15
COPB1-210ENST00000533533 ESF1Q9H501 851 aaKnown RBP14.11□□□□□ -0.15
COPB1-210ENST00000533533 FYCO1Q9BQS8 1478 aa14.11□□□□□ -0.15
COPB1-210ENST00000533533 SAMD9LQ8IVG5 1584 aa14.08□□□□□ -0.16
COPB1-210ENST00000533533 CNTLNQ9NXG0 1405 aa14.07□□□□□ -0.16
COPB1-210ENST00000533533 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
COPB1-210ENST00000533533 PTPRTO14522 1441 aa14.07□□□□□ -0.16
COPB1-210ENST00000533533 GPATCH8Q9UKJ3 1502 aaKnown RBP14.06□□□□□ -0.16
COPB1-210ENST00000533533 SYCP2Q9BX26 1530 aa14.05□□□□□ -0.16
COPB1-210ENST00000533533 MROH2AA6NES4 1674 aa14.04□□□□□ -0.16
COPB1-210ENST00000533533 HNRNPMP52272 730 aaKnown RBP eCLIP14.04□□□□□ -0.16
COPB1-210ENST00000533533 SPAG9O60271 1321 aaKnown RBP14.04□□□□□ -0.16
COPB1-210ENST00000533533 SUPT6HQ7KZ85 1726 aaKnown RBP14.04□□□□□ -0.16
COPB1-210ENST00000533533 NPATQ14207 1427 aa14.03□□□□□ -0.16
COPB1-210ENST00000533533 NCOA1Q15788 1441 aa14.02□□□□□ -0.16
COPB1-210ENST00000533533 KIAA1107Q9UPP5 1409 aa14.02□□□□□ -0.16
COPB1-210ENST00000533533 ZMYM3Q14202 1370 aa14.02□□□□□ -0.17
COPB1-210ENST00000533533 ATP7AQ04656 1500 aa14.01□□□□□ -0.17
COPB1-210ENST00000533533 PLEKHH2Q8IVE3 1493 aa14.01□□□□□ -0.17
COPB1-210ENST00000533533 CFDP1Q9UEE9 299 aaPredicted RBP14.01□□□□□ -0.17
COPB1-210ENST00000533533 CCNB3Q8WWL7 1395 aa14□□□□□ -0.17
COPB1-210ENST00000533533 LTBP4Q8N2S1 1624 aa14□□□□□ -0.17
COPB1-210ENST00000533533 PLXNC1O60486 1568 aa14□□□□□ -0.17
COPB1-210ENST00000533533 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
COPB1-210ENST00000533533 CAMSAP1Q5T5Y3 1602 aa13.99□□□□□ -0.17
COPB1-210ENST00000533533 A2MP01023 1474 aa13.99□□□□□ -0.17
COPB1-210ENST00000533533 CLTCQ00610 1675 aaKnown RBP13.98□□□□□ -0.17
COPB1-210ENST00000533533 MTUS2Q5JR59 1369 aa13.97□□□□□ -0.17
COPB1-210ENST00000533533 DISP3Q9P2K9 1392 aa13.96□□□□□ -0.17
COPB1-210ENST00000533533 ADGBQ8N7X0 1667 aa13.96□□□□□ -0.17
COPB1-210ENST00000533533 IQSEC2Q5JU85 1478 aa13.96□□□□□ -0.17
COPB1-210ENST00000533533 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
COPB1-210ENST00000533533 GGT6Q6P531 493 aa13.95□□□□□ -0.18
COPB1-210ENST00000533533 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
COPB1-210ENST00000533533 MYO3AQ8NEV4 1616 aa13.94□□□□□ -0.18
COPB1-210ENST00000533533 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
COPB1-210ENST00000533533 ZNF644Q9H582 1327 aaPredicted RBP13.93□□□□□ -0.18
COPB1-210ENST00000533533 TIAM1Q13009 1591 aa13.93□□□□□ -0.18
COPB1-210ENST00000533533 PLA2R1Q13018 1463 aa13.93□□□□□ -0.18
COPB1-210ENST00000533533 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
COPB1-210ENST00000533533 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
COPB1-210ENST00000533533 PKD2Q13563 968 aa13.92□□□□□ -0.18
COPB1-210ENST00000533533 ILDR2Q71H61 639 aa13.92□□□□□ -0.18
COPB1-210ENST00000533533 MBD5Q9P267 1494 aa13.92□□□□□ -0.18
COPB1-210ENST00000533533 EHBP1L1Q8N3D4 1523 aa13.91□□□□□ -0.18
COPB1-210ENST00000533533 ZNF335Q9H4Z2 1342 aaPredicted RBP13.9□□□□□ -0.18
COPB1-210ENST00000533533 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.18
COPB1-210ENST00000533533 TCOF1Q13428 1488 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms