RNA–Protein interactions for RNA: ENST00000531318.1

NFRKB-208, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 4

Gene NFRKB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-208ENST00000531318 ZFYVE16Q7Z3T8 1539 aa12.39□□□□□ -0.43
NFRKB-208ENST00000531318 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
NFRKB-208ENST00000531318 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
NFRKB-208ENST00000531318 POGZQ7Z3K3 1410 aa12.37□□□□□ -0.43
NFRKB-208ENST00000531318 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
NFRKB-208ENST00000531318 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
NFRKB-208ENST00000531318 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
NFRKB-208ENST00000531318 MYO5CQ9NQX4 1742 aa12.36□□□□□ -0.43
NFRKB-208ENST00000531318 ZMYM4Q5VZL5 1548 aa12.36□□□□□ -0.43
NFRKB-208ENST00000531318 EEA1Q15075 1411 aa12.34□□□□□ -0.43
NFRKB-208ENST00000531318 SCAPERQ9BY12 1400 aa12.33□□□□□ -0.44
NFRKB-208ENST00000531318 PREX1Q8TCU6 1659 aa12.32□□□□□ -0.44
NFRKB-208ENST00000531318 SETD1BQ9UPS6 1966 aaKnown RBP12.31□□□□□ -0.44
NFRKB-208ENST00000531318 MYT1LQ9UL68 1186 aa12.31□□□□□ -0.44
NFRKB-208ENST00000531318 MAGI2Q86UL8 1455 aa12.3□□□□□ -0.44
NFRKB-208ENST00000531318 KIF14Q15058 1648 aa12.29□□□□□ -0.44
NFRKB-208ENST00000531318 UBTFP17480 764 aaKnown RBP12.29□□□□□ -0.44
NFRKB-208ENST00000531318 CEBPAP49715 358 aaPredicted RBP12.29□□□□□ -0.44
NFRKB-208ENST00000531318 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
NFRKB-208ENST00000531318 PLCH2O75038 1416 aa12.28□□□□□ -0.44
NFRKB-208ENST00000531318 ATP10AO60312 1499 aa12.27□□□□□ -0.44
NFRKB-208ENST00000531318 LRRIQ1Q96JM4 1722 aa12.27□□□□□ -0.45
NFRKB-208ENST00000531318 C9orf84Q5VXU9 1444 aa12.27□□□□□ -0.45
NFRKB-208ENST00000531318 ARHGAP5Q13017 1502 aa12.27□□□□□ -0.45
NFRKB-208ENST00000531318 ARHGEF12Q9NZN5 1544 aa12.27□□□□□ -0.45
NFRKB-208ENST00000531318 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
NFRKB-208ENST00000531318 STRCQ7RTU9 1775 aa12.25□□□□□ -0.45
NFRKB-208ENST00000531318 CDC42BPBQ9Y5S2 1711 aa12.25□□□□□ -0.45
NFRKB-208ENST00000531318 CDK11AQ9UQ88 783 aaPredicted RBP12.24□□□□□ -0.45
NFRKB-208ENST00000531318 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
NFRKB-208ENST00000531318 C3P01024 1663 aa12.22□□□□□ -0.45
NFRKB-208ENST00000531318 ZNF518AQ6AHZ1 1483 aa12.22□□□□□ -0.45
NFRKB-208ENST00000531318 ARHGAP35Q9NRY4 1499 aa12.22□□□□□ -0.45
NFRKB-208ENST00000531318 AFAP1Q8N556 730 aa12.22□□□□□ -0.45
NFRKB-208ENST00000531318 ABCA6Q8N139 1617 aa12.22□□□□□ -0.45
NFRKB-208ENST00000531318 DIP2CQ9Y2E4 1556 aa12.22□□□□□ -0.45
NFRKB-208ENST00000531318 CLIP1P30622 1438 aa12.2□□□□□ -0.46
NFRKB-208ENST00000531318 TROQ12816 1431 aaPredicted RBP12.2□□□□□ -0.46
NFRKB-208ENST00000531318 UHRF1BP1Q6BDS2 1440 aa12.2□□□□□ -0.46
NFRKB-208ENST00000531318 KDM5CP41229 1560 aa12.2□□□□□ -0.46
NFRKB-208ENST00000531318 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
NFRKB-208ENST00000531318 DISP3Q9P2K9 1392 aa12.19□□□□□ -0.46
NFRKB-208ENST00000531318 ESF1Q9H501 851 aaKnown RBP12.19□□□□□ -0.46
NFRKB-208ENST00000531318 PREX2Q70Z35 1606 aa12.18□□□□□ -0.46
NFRKB-208ENST00000531318 CDC42BPAQ5VT25 1732 aa12.17□□□□□ -0.46
NFRKB-208ENST00000531318 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
NFRKB-208ENST00000531318 SUPT6HQ7KZ85 1726 aaKnown RBP12.16□□□□□ -0.46
NFRKB-208ENST00000531318 KIDINS220Q9ULH0 1771 aa12.15□□□□□ -0.46
NFRKB-208ENST00000531318 ABCC1P33527 1531 aa12.15□□□□□ -0.46
NFRKB-208ENST00000531318 TRAPPC8Q9Y2L5 1435 aa12.14□□□□□ -0.47
NFRKB-208ENST00000531318 ILDR2Q71H61 639 aa12.14□□□□□ -0.47
NFRKB-208ENST00000531318 REREQ9P2R6 1566 aa12.13□□□□□ -0.47
NFRKB-208ENST00000531318 ZNF777Q9ULD5 760 aaPredicted RBP12.13□□□□□ -0.47
NFRKB-208ENST00000531318 MLH3Q9UHC1 1453 aa12.13□□□□□ -0.47
NFRKB-208ENST00000531318 SPATA31D1Q6ZQQ2 1576 aa12.11□□□□□ -0.47
NFRKB-208ENST00000531318 AGLP35573 1532 aa12.11□□□□□ -0.47
NFRKB-208ENST00000531318 CCDC18Q5T9S5 1454 aa12.1□□□□□ -0.47
NFRKB-208ENST00000531318 PTPRTO14522 1441 aa12.1□□□□□ -0.47
NFRKB-208ENST00000531318 CLTCQ00610 1675 aaKnown RBP12.1□□□□□ -0.47
NFRKB-208ENST00000531318 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
NFRKB-208ENST00000531318 MROH2AA6NES4 1674 aa12.09□□□□□ -0.47
NFRKB-208ENST00000531318 SAMD9LQ8IVG5 1584 aa12.09□□□□□ -0.47
NFRKB-208ENST00000531318 CAMSAP1Q5T5Y3 1602 aa12.08□□□□□ -0.48
NFRKB-208ENST00000531318 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
NFRKB-208ENST00000531318 CASKIN1Q8WXD9 1431 aa12.08□□□□□ -0.48
NFRKB-208ENST00000531318 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
NFRKB-208ENST00000531318 CNTLNQ9NXG0 1405 aa12.07□□□□□ -0.48
NFRKB-208ENST00000531318 NCOA1Q15788 1441 aa12.06□□□□□ -0.48
NFRKB-208ENST00000531318 SOCS7O14512 581 aa12.06□□□□□ -0.48
NFRKB-208ENST00000531318 HNRNPMP52272 730 aaKnown RBP eCLIP12.06□□□□□ -0.48
NFRKB-208ENST00000531318 SPAG9O60271 1321 aaKnown RBP12.05□□□□□ -0.48
NFRKB-208ENST00000531318 NCKAP5LQ9HCH0 1330 aa12.05□□□□□ -0.48
NFRKB-208ENST00000531318 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
NFRKB-208ENST00000531318 FYCO1Q9BQS8 1478 aa12.03□□□□□ -0.48
NFRKB-208ENST00000531318 ATP7AQ04656 1500 aa12.03□□□□□ -0.48
NFRKB-208ENST00000531318 ZMYM3Q14202 1370 aa12.03□□□□□ -0.48
NFRKB-208ENST00000531318 GGT6Q6P531 493 aa12.02□□□□□ -0.49
NFRKB-208ENST00000531318 ZNF142P52746 1687 aaPredicted RBP12.02□□□□□ -0.49
NFRKB-208ENST00000531318 ZNF335Q9H4Z2 1342 aaPredicted RBP12.02□□□□□ -0.49
NFRKB-208ENST00000531318 GPATCH8Q9UKJ3 1502 aaKnown RBP12.01□□□□□ -0.49
NFRKB-208ENST00000531318 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
NFRKB-208ENST00000531318 UBAP1LF5GYI3 381 aa12.01□□□□□ -0.49
NFRKB-208ENST00000531318 NPATQ14207 1427 aa12.01□□□□□ -0.49
NFRKB-208ENST00000531318 CEP170BQ9Y4F5 1589 aaPredicted RBP12.01□□□□□ -0.49
NFRKB-208ENST00000531318 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
NFRKB-208ENST00000531318 CFDP1Q9UEE9 299 aaPredicted RBP12□□□□□ -0.49
NFRKB-208ENST00000531318 A2MP01023 1474 aa12□□□□□ -0.49
NFRKB-208ENST00000531318 IQSEC2Q5JU85 1478 aa12□□□□□ -0.49
NFRKB-208ENST00000531318 CCNB3Q8WWL7 1395 aa11.99□□□□□ -0.49
NFRKB-208ENST00000531318 PLXNC1O60486 1568 aa11.98□□□□□ -0.49
NFRKB-208ENST00000531318 SCAF1Q9H7N4 1312 aaKnown RBP11.98□□□□□ -0.49
NFRKB-208ENST00000531318 CFAP65Q6ZU64 1925 aaKnown RBP11.98□□□□□ -0.49
NFRKB-208ENST00000531318 POLR1AO95602 1720 aaPredicted RBP11.97□□□□□ -0.49
NFRKB-208ENST00000531318 PLEKHH2Q8IVE3 1493 aa11.97□□□□□ -0.49
NFRKB-208ENST00000531318 MTUS2Q5JR59 1369 aa11.97□□□□□ -0.49
NFRKB-208ENST00000531318 PTPRKQ15262 1439 aa11.96□□□□□ -0.49
NFRKB-208ENST00000531318 ZNF644Q9H582 1327 aaPredicted RBP11.95□□□□□ -0.5
NFRKB-208ENST00000531318 PKD2Q13563 968 aa11.95□□□□□ -0.5
NFRKB-208ENST00000531318 PLA2R1Q13018 1463 aa11.95□□□□□ -0.5
NFRKB-208ENST00000531318 KIAA1107Q9UPP5 1409 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms