RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 MORC1Q86VD1 984 aa18.56■□□□□ 0.56
LRRK1-207ENST00000531270 CLIP1P30622 1438 aa18.56■□□□□ 0.56
LRRK1-207ENST00000531270 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
LRRK1-207ENST00000531270 CHMP3Q9Y3E7 222 aa18.56■□□□□ 0.56
LRRK1-207ENST00000531270 STK26Q9P289 416 aa18.55■□□□□ 0.56
LRRK1-207ENST00000531270 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
LRRK1-207ENST00000531270 SIN3AQ96ST3 1273 aa18.54■□□□□ 0.56
LRRK1-207ENST00000531270 GORABQ5T7V8 394 aa18.53■□□□□ 0.56
LRRK1-207ENST00000531270 RASSF8Q8NHQ8 419 aa18.53■□□□□ 0.56
LRRK1-207ENST00000531270 G3V3G9 751 aa18.52■□□□□ 0.56
LRRK1-207ENST00000531270 DCAF8Q5TAQ9 597 aa18.52■□□□□ 0.56
LRRK1-207ENST00000531270 FBXO3Q9UK99 471 aa18.52■□□□□ 0.56
LRRK1-207ENST00000531270 TMF1P82094 1093 aa18.52■□□□□ 0.55
LRRK1-207ENST00000531270 DCAF11Q8TEB1 546 aa18.51■□□□□ 0.55
LRRK1-207ENST00000531270 VPS53Q5VIR6 699 aa18.5■□□□□ 0.55
LRRK1-207ENST00000531270 TNNT3P45378 269 aaPredicted RBP18.49■□□□□ 0.55
LRRK1-207ENST00000531270 WWC1Q8IX03 1113 aa18.49■□□□□ 0.55
LRRK1-207ENST00000531270 TAF7LQ5H9L4 462 aa18.48■□□□□ 0.55
LRRK1-207ENST00000531270 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
LRRK1-207ENST00000531270 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
LRRK1-207ENST00000531270 DEKP35659 375 aaKnown RBP18.46■□□□□ 0.55
LRRK1-207ENST00000531270 TPM4P67936 248 aa18.46■□□□□ 0.55
LRRK1-207ENST00000531270 HDGFP51858 240 aaKnown RBP18.46■□□□□ 0.55
LRRK1-207ENST00000531270 SLKQ9H2G2 1235 aaPredicted RBP18.46■□□□□ 0.55
LRRK1-207ENST00000531270 DCAF1Q9Y4B6 1507 aa18.45■□□□□ 0.54
LRRK1-207ENST00000531270 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
LRRK1-207ENST00000531270 GBP4Q96PP9 640 aa18.43■□□□□ 0.54
LRRK1-207ENST00000531270 TOMM22Q9NS69 142 aa18.43■□□□□ 0.54
LRRK1-207ENST00000531270 GOLGA6L1Q8N7Z2 621 aa18.43■□□□□ 0.54
LRRK1-207ENST00000531270 CEP89Q96ST8 783 aa18.43■□□□□ 0.54
LRRK1-207ENST00000531270 TRIM6-TRIM34B2RNG4 842 aa18.43■□□□□ 0.54
LRRK1-207ENST00000531270 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
LRRK1-207ENST00000531270 MARCH6O60337 910 aa18.41■□□□□ 0.54
LRRK1-207ENST00000531270 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
LRRK1-207ENST00000531270 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
LRRK1-207ENST00000531270 IPO8O15397 1037 aaKnown RBP18.4■□□□□ 0.54
LRRK1-207ENST00000531270 KANK1Q14678 1352 aa18.39■□□□□ 0.53
LRRK1-207ENST00000531270 FRAT2O75474 233 aaPredicted RBP18.39■□□□□ 0.53
LRRK1-207ENST00000531270 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
LRRK1-207ENST00000531270 GGT6Q6P531 493 aa18.39■□□□□ 0.53
LRRK1-207ENST00000531270 U2AF1L5P0DN76 240 aaPredicted RBP18.38■□□□□ 0.53
LRRK1-207ENST00000531270 U2AF1Q01081 240 aaKnown RBP eCLIP18.38■□□□□ 0.53
LRRK1-207ENST00000531270 PES1O00541 588 aaKnown RBP18.38■□□□□ 0.53
LRRK1-207ENST00000531270 KRI1Q8N9T8 703 aaKnown RBP18.38■□□□□ 0.53
LRRK1-207ENST00000531270 FOXD4L5Q5VV16 416 aaPredicted RBP18.36■□□□□ 0.53
LRRK1-207ENST00000531270 FOXD4L4Q8WXT5 416 aaPredicted RBP18.36■□□□□ 0.53
LRRK1-207ENST00000531270 SYAP1Q96A49 352 aaPredicted RBP18.36■□□□□ 0.53
LRRK1-207ENST00000531270 SLC4A10Q6U841 1118 aa18.36■□□□□ 0.53
LRRK1-207ENST00000531270 GPATCH3Q96I76 525 aa18.35■□□□□ 0.53
LRRK1-207ENST00000531270 CCDC34Q96HJ3 373 aa18.35■□□□□ 0.53
LRRK1-207ENST00000531270 PATL2C9JE40 543 aaKnown RBP18.33■□□□□ 0.53
LRRK1-207ENST00000531270 STK31Q9BXU1 1019 aa18.33■□□□□ 0.53
LRRK1-207ENST00000531270 GTF2E1P29083 439 aaPredicted RBP18.33■□□□□ 0.52
LRRK1-207ENST00000531270 TPM3P06753 285 aa18.33■□□□□ 0.52
LRRK1-207ENST00000531270 RWDD1Q9H446 243 aaPredicted RBP18.32■□□□□ 0.52
LRRK1-207ENST00000531270 PTMSP20962 102 aa18.31■□□□□ 0.52
LRRK1-207ENST00000531270 RAD21O60216 631 aa18.29■□□□□ 0.52
LRRK1-207ENST00000531270 LTV1Q96GA3 475 aaPredicted RBP18.29■□□□□ 0.52
LRRK1-207ENST00000531270 CCNB3Q8WWL7 1395 aa18.29■□□□□ 0.52
LRRK1-207ENST00000531270 SPAG9O60271 1321 aaKnown RBP18.28■□□□□ 0.52
LRRK1-207ENST00000531270 CALD1Q05682 793 aaKnown RBP18.28■□□□□ 0.52
LRRK1-207ENST00000531270 SF3A1Q15459 793 aaKnown RBP18.27■□□□□ 0.52
LRRK1-207ENST00000531270 TPD52L1Q16890 204 aaPredicted RBP18.27■□□□□ 0.52
LRRK1-207ENST00000531270 GOLGA6L3A6NEY3 463 aa18.26■□□□□ 0.51
LRRK1-207ENST00000531270 SMC4Q9NTJ3 1288 aa18.26■□□□□ 0.51
LRRK1-207ENST00000531270 CCAR2Q8N163 923 aaKnown RBP18.26■□□□□ 0.51
LRRK1-207ENST00000531270 MSH5O43196 834 aa18.26■□□□□ 0.51
LRRK1-207ENST00000531270 KTN1Q86UP2 1357 aaKnown RBP18.25■□□□□ 0.51
LRRK1-207ENST00000531270 CLUAP1Q96AJ1 413 aa18.25■□□□□ 0.51
LRRK1-207ENST00000531270 CEP162Q5TB80 1403 aa18.25■□□□□ 0.51
LRRK1-207ENST00000531270 CSPP1Q1MSJ5 1256 aa18.24■□□□□ 0.51
LRRK1-207ENST00000531270 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
LRRK1-207ENST00000531270 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
LRRK1-207ENST00000531270 FOXD1Q16676 465 aa18.23■□□□□ 0.51
LRRK1-207ENST00000531270 RCAN3Q9UKA8 241 aa18.23■□□□□ 0.51
LRRK1-207ENST00000531270 GOLGA3Q08378 1498 aa18.22■□□□□ 0.51
LRRK1-207ENST00000531270 RBM19Q9Y4C8 960 aaKnown RBP18.22■□□□□ 0.51
LRRK1-207ENST00000531270 NUTM2FA1L443 756 aa18.22■□□□□ 0.51
LRRK1-207ENST00000531270 HSPA5P11021 654 aaKnown RBP18.22■□□□□ 0.51
LRRK1-207ENST00000531270 FOXD4L6Q3SYB3 417 aaPredicted RBP18.21■□□□□ 0.51
LRRK1-207ENST00000531270 FOXD4L3Q6VB84 417 aaPredicted RBP18.21■□□□□ 0.51
LRRK1-207ENST00000531270 CCDC146Q8IYE0 955 aa18.21■□□□□ 0.51
LRRK1-207ENST00000531270 KIF16BQ96L93 1317 aa18.21■□□□□ 0.51
LRRK1-207ENST00000531270 HMMRO75330 724 aa18.21■□□□□ 0.51
LRRK1-207ENST00000531270 TCEAL9Q9UHQ7 104 aa18.21■□□□□ 0.51
LRRK1-207ENST00000531270 ERCC6Q03468 1493 aa18.2■□□□□ 0.5
LRRK1-207ENST00000531270 H3BQV1 296 aa18.19■□□□□ 0.5
LRRK1-207ENST00000531270 IFFO2Q5TF58 517 aa18.19■□□□□ 0.5
LRRK1-207ENST00000531270 PMFBP1Q8TBY8 1022 aa18.19■□□□□ 0.5
LRRK1-207ENST00000531270 TSR1Q2NL82 804 aaKnown RBP18.18■□□□□ 0.5
LRRK1-207ENST00000531270 NGDNQ8NEJ9 315 aaKnown RBP18.18■□□□□ 0.5
LRRK1-207ENST00000531270 AMPHP49418 695 aa18.17■□□□□ 0.5
LRRK1-207ENST00000531270 CTDP1Q9Y5B0 961 aaPredicted RBP18.17■□□□□ 0.5
LRRK1-207ENST00000531270 SETQ01105 290 aaPredicted RBP18.17■□□□□ 0.5
LRRK1-207ENST00000531270 USP35Q9P2H5 1018 aa18.16■□□□□ 0.5
LRRK1-207ENST00000531270 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
LRRK1-207ENST00000531270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.5
LRRK1-207ENST00000531270 AKAP17AQ02040 695 aaKnown RBP18.15■□□□□ 0.5
LRRK1-207ENST00000531270 RILPL2Q969X0 211 aa18.15■□□□□ 0.5
LRRK1-207ENST00000531270 TCERG1O14776 1098 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms