RNA–Protein interactions for RNA: ENST00000530548.5

PPFIA1-215, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-215ENST00000530548 GRIN2AQ12879 1464 aa10.72□□□□□ -0.69
PPFIA1-215ENST00000530548 EPRSP07814 1512 aaKnown RBP10.72□□□□□ -0.69
PPFIA1-215ENST00000530548 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
PPFIA1-215ENST00000530548 ANKRD30AQ9BXX3 1397 aa10.71□□□□□ -0.69
PPFIA1-215ENST00000530548 IQGAP2Q13576 1575 aa10.71□□□□□ -0.69
PPFIA1-215ENST00000530548 KIAA0586Q9BVV6 1533 aa10.71□□□□□ -0.69
PPFIA1-215ENST00000530548 PTPRKQ15262 1439 aa10.71□□□□□ -0.7
PPFIA1-215ENST00000530548 EFCAB5A4FU69 1503 aa10.7□□□□□ -0.7
PPFIA1-215ENST00000530548 SAFB2Q14151 953 aaKnown RBP eCLIP10.69□□□□□ -0.7
PPFIA1-215ENST00000530548 TMC1Q8TDI8 760 aa10.69□□□□□ -0.7
PPFIA1-215ENST00000530548 SPAG9O60271 1321 aaKnown RBP10.68□□□□□ -0.7
PPFIA1-215ENST00000530548 CUL7Q14999 1698 aa10.68□□□□□ -0.7
PPFIA1-215ENST00000530548 ESF1Q9H501 851 aaKnown RBP10.68□□□□□ -0.7
PPFIA1-215ENST00000530548 CC2D1BQ5T0F9 858 aaKnown RBP10.67□□□□□ -0.7
PPFIA1-215ENST00000530548 SYNJ2O15056 1496 aa10.67□□□□□ -0.7
PPFIA1-215ENST00000530548 ARID4BQ4LE39 1312 aaPredicted RBP10.66□□□□□ -0.7
PPFIA1-215ENST00000530548 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
PPFIA1-215ENST00000530548 NAIPQ13075 1403 aa10.65□□□□□ -0.7
PPFIA1-215ENST00000530548 THOC2Q8NI27 1593 aaKnown RBP10.65□□□□□ -0.7
PPFIA1-215ENST00000530548 TNNT2P45379 298 aaPredicted RBP10.65□□□□□ -0.7
PPFIA1-215ENST00000530548 NBPF8Q3BBV2 869 aa10.65□□□□□ -0.7
PPFIA1-215ENST00000530548 ARHGEF11O15085 1522 aa10.65□□□□□ -0.7
PPFIA1-215ENST00000530548 KIF15Q9NS87 1388 aa10.64□□□□□ -0.71
PPFIA1-215ENST00000530548 UACAQ9BZF9 1416 aa10.64□□□□□ -0.71
PPFIA1-215ENST00000530548 ST20-MTHFSA0A0A6YYL1 179 aa10.64□□□□□ -0.71
PPFIA1-215ENST00000530548 TRHP20396 242 aaPredicted RBP10.63□□□□□ -0.71
PPFIA1-215ENST00000530548 TIMELESSQ9UNS1 1208 aa10.63□□□□□ -0.71
PPFIA1-215ENST00000530548 TROQ12816 1431 aaPredicted RBP10.63□□□□□ -0.71
PPFIA1-215ENST00000530548 SUPT16HQ9Y5B9 1047 aaKnown RBP10.62□□□□□ -0.71
PPFIA1-215ENST00000530548 ANKRD50Q9ULJ7 1429 aa10.61□□□□□ -0.71
PPFIA1-215ENST00000530548 BCL11AQ9H165 835 aa10.61□□□□□ -0.71
PPFIA1-215ENST00000530548 STK26Q9P289 416 aa10.61□□□□□ -0.71
PPFIA1-215ENST00000530548 WDR97A6NE52 1622 aa10.61□□□□□ -0.71
PPFIA1-215ENST00000530548 HFM1A2PYH4 1435 aa10.6□□□□□ -0.71
PPFIA1-215ENST00000530548 EHBP1L1Q8N3D4 1523 aa10.6□□□□□ -0.71
PPFIA1-215ENST00000530548 MAGI1Q96QZ7 1491 aaPredicted RBP10.59□□□□□ -0.71
PPFIA1-215ENST00000530548 EIF4G3O43432 1585 aaKnown RBP10.59□□□□□ -0.71
PPFIA1-215ENST00000530548 RAPGEF3O95398 923 aa10.59□□□□□ -0.71
PPFIA1-215ENST00000530548 NUP153P49790 1475 aaKnown RBP10.59□□□□□ -0.71
PPFIA1-215ENST00000530548 DAPK1P53355 1430 aa10.59□□□□□ -0.71
PPFIA1-215ENST00000530548 HECW1Q76N89 1606 aa10.59□□□□□ -0.71
PPFIA1-215ENST00000530548 ROCK2O75116 1388 aaKnown RBP10.58□□□□□ -0.72
PPFIA1-215ENST00000530548 ABCC5O15440 1437 aa10.58□□□□□ -0.72
PPFIA1-215ENST00000530548 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
PPFIA1-215ENST00000530548 ABCA5Q8WWZ7 1642 aa10.58□□□□□ -0.72
PPFIA1-215ENST00000530548 TARBP1Q13395 1621 aaKnown RBP10.57□□□□□ -0.72
PPFIA1-215ENST00000530548 ADAMTS12P58397 1594 aa10.57□□□□□ -0.72
PPFIA1-215ENST00000530548 SUPT6HQ7KZ85 1726 aaKnown RBP10.57□□□□□ -0.72
PPFIA1-215ENST00000530548 ARHGAP5Q13017 1502 aa10.57□□□□□ -0.72
PPFIA1-215ENST00000530548 WASHC2AQ641Q2 1341 aa10.57□□□□□ -0.72
PPFIA1-215ENST00000530548 C11orf95C9JLR9 678 aaPredicted RBP10.56□□□□□ -0.72
PPFIA1-215ENST00000530548 FAM69CQ0P6D2 419 aa10.56□□□□□ -0.72
PPFIA1-215ENST00000530548 WASHC2CQ9Y4E1 1318 aa10.56□□□□□ -0.72
PPFIA1-215ENST00000530548 PTPN23Q9H3S7 1636 aa10.56□□□□□ -0.72
PPFIA1-215ENST00000530548 C9orf84Q5VXU9 1444 aa10.55□□□□□ -0.72
PPFIA1-215ENST00000530548 DISP1Q96F81 1524 aa10.55□□□□□ -0.72
PPFIA1-215ENST00000530548 CTTNBP2Q8WZ74 1663 aa10.55□□□□□ -0.72
PPFIA1-215ENST00000530548 CCDC184Q52MB2 194 aa10.55□□□□□ -0.72
PPFIA1-215ENST00000530548 MAGI3Q5TCQ9 1506 aa10.55□□□□□ -0.72
PPFIA1-215ENST00000530548 ATP10BO94823 1461 aa10.55□□□□□ -0.72
PPFIA1-215ENST00000530548 NEUROD2Q15784 382 aa10.54□□□□□ -0.72
PPFIA1-215ENST00000530548 WDR62O43379 1518 aa10.54□□□□□ -0.72
PPFIA1-215ENST00000530548 MIA2Q96PC5 1412 aa10.53□□□□□ -0.72
PPFIA1-215ENST00000530548 SCAPERQ9BY12 1400 aa10.53□□□□□ -0.72
PPFIA1-215ENST00000530548 RSPH4AQ5TD94 716 aa10.53□□□□□ -0.72
PPFIA1-215ENST00000530548 TRAK1Q9UPV9 953 aa10.53□□□□□ -0.72
PPFIA1-215ENST00000530548 CCDC144AA2RUR9 1427 aa10.53□□□□□ -0.72
PPFIA1-215ENST00000530548 MAPKBP1O60336 1514 aa10.52□□□□□ -0.72
PPFIA1-215ENST00000530548 MAP3K1Q13233 1512 aa10.52□□□□□ -0.72
PPFIA1-215ENST00000530548 PPM1GO15355 546 aaPredicted RBP10.52□□□□□ -0.73
PPFIA1-215ENST00000530548 USP47Q96K76 1375 aa10.52□□□□□ -0.73
PPFIA1-215ENST00000530548 CAMSAP2Q08AD1 1489 aa10.52□□□□□ -0.73
PPFIA1-215ENST00000530548 KNSTRNQ9Y448 316 aa10.52□□□□□ -0.73
PPFIA1-215ENST00000530548 ERICH6Q7L0X2 663 aa10.51□□□□□ -0.73
PPFIA1-215ENST00000530548 KIF7Q2M1P5 1343 aa10.51□□□□□ -0.73
PPFIA1-215ENST00000530548 KANK1Q14678 1352 aa10.51□□□□□ -0.73
PPFIA1-215ENST00000530548 GPATCH8Q9UKJ3 1502 aaKnown RBP10.51□□□□□ -0.73
PPFIA1-215ENST00000530548 PBRM1Q86U86 1689 aa10.51□□□□□ -0.73
PPFIA1-215ENST00000530548 NCOA1Q15788 1441 aa10.5□□□□□ -0.73
PPFIA1-215ENST00000530548 NUTM2FA1L443 756 aa10.5□□□□□ -0.73
PPFIA1-215ENST00000530548 TMEM132EQ6IEE7 984 aa10.5□□□□□ -0.73
PPFIA1-215ENST00000530548 SLC24A1O60721 1099 aa10.49□□□□□ -0.73
PPFIA1-215ENST00000530548 TMF1P82094 1093 aa10.49□□□□□ -0.73
PPFIA1-215ENST00000530548 WDR43Q15061 677 aaKnown RBP eCLIP10.49□□□□□ -0.73
PPFIA1-215ENST00000530548 KIAA0556O60303 1618 aa10.49□□□□□ -0.73
PPFIA1-215ENST00000530548 PRKRIP1Q9H875 184 aaPredicted RBP10.49□□□□□ -0.73
PPFIA1-215ENST00000530548 SOX12O15370 315 aa10.48□□□□□ -0.73
PPFIA1-215ENST00000530548 CEP170Q5SW79 1584 aa10.48□□□□□ -0.73
PPFIA1-215ENST00000530548 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
PPFIA1-215ENST00000530548 POGKQ9P215 609 aa10.48□□□□□ -0.73
PPFIA1-215ENST00000530548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.47□□□□□ -0.732e-23■□□□□ 10
PPFIA1-215ENST00000530548 RAPGEF6Q8TEU7 1601 aa10.47□□□□□ -0.73
PPFIA1-215ENST00000530548 CFAP70Q5T0N1 1121 aa10.47□□□□□ -0.73
PPFIA1-215ENST00000530548 PANK3Q9H999 370 aa10.47□□□□□ -0.73
PPFIA1-215ENST00000530548 ANKRD30BQ9BXX2 1392 aa10.46□□□□□ -0.73
PPFIA1-215ENST00000530548 CCER2I3L3R5 266 aa10.46□□□□□ -0.74
PPFIA1-215ENST00000530548 SRPK2P78362 688 aaKnown RBP10.46□□□□□ -0.74
PPFIA1-215ENST00000530548 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
PPFIA1-215ENST00000530548 NUP160Q12769 1436 aa10.45□□□□□ -0.74
PPFIA1-215ENST00000530548 CCDC7Q96M83 1385 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms