RNA–Protein interactions for RNA: ENST00000529088.1

LINC02553-201, Transcript of long intergenic non-protein coding RNA 2553, humanhuman

TSL 5 BASIC

Gene LINC02553, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02553-201ENST00000529088 FBXO22Q8NEZ5 403 aa13.28□□□□□ -0.28
LINC02553-201ENST00000529088 ERBB3P21860 1342 aa13.28□□□□□ -0.28
LINC02553-201ENST00000529088 STK25O00506 426 aa13.27□□□□□ -0.29
LINC02553-201ENST00000529088 MFRPQ9BY79 579 aa13.26□□□□□ -0.29
LINC02553-201ENST00000529088 RGL2O15211 777 aa13.25□□□□□ -0.29
LINC02553-201ENST00000529088 NLRP6P59044 892 aa13.25□□□□□ -0.29
LINC02553-201ENST00000529088 PKD2Q13563 968 aa13.25□□□□□ -0.29
LINC02553-201ENST00000529088 VARS2Q5ST30 1063 aaKnown RBP13.23□□□□□ -0.29
LINC02553-201ENST00000529088 RIMBP2O15034 1052 aa13.22□□□□□ -0.29
LINC02553-201ENST00000529088 GPR153Q6NV75 609 aa13.19□□□□□ -0.3
LINC02553-201ENST00000529088 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
LINC02553-201ENST00000529088 ARSIQ5FYB1 569 aa13.18□□□□□ -0.3
LINC02553-201ENST00000529088 KHSRPQ92945 711 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC02553-201ENST00000529088 ZSWIM6Q9HCJ5 1215 aa13.13□□□□□ -0.31
LINC02553-201ENST00000529088 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
LINC02553-201ENST00000529088 PPP1R37O75864 691 aa13.08□□□□□ -0.32
LINC02553-201ENST00000529088 KIF3CO14782 793 aa13.07□□□□□ -0.32
LINC02553-201ENST00000529088 ZNF687Q8N1G0 1237 aa13.06□□□□□ -0.32
LINC02553-201ENST00000529088 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
LINC02553-201ENST00000529088 NUDT7P0C024 238 aa13.01□□□□□ -0.33
LINC02553-201ENST00000529088 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
LINC02553-201ENST00000529088 TMC2Q8TDI7 906 aa12.97□□□□□ -0.33
LINC02553-201ENST00000529088 RNF166Q96A37 237 aaPredicted RBP12.97□□□□□ -0.33
LINC02553-201ENST00000529088 PCDHGA4Q9Y5G9 962 aa12.95□□□□□ -0.34
LINC02553-201ENST00000529088 MYT1LQ9UL68 1186 aa12.94□□□□□ -0.34
LINC02553-201ENST00000529088 LHX6Q9UPM6 363 aa12.93□□□□□ -0.34
LINC02553-201ENST00000529088 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
LINC02553-201ENST00000529088 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
LINC02553-201ENST00000529088 SLC34A2O95436 690 aa12.87□□□□□ -0.35
LINC02553-201ENST00000529088 CHGAP10645 457 aaKnown RBP12.87□□□□□ -0.35
LINC02553-201ENST00000529088 HS6ST3Q8IZP7 471 aa12.87□□□□□ -0.35
LINC02553-201ENST00000529088 LSM11P83369 360 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC02553-201ENST00000529088 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
LINC02553-201ENST00000529088 PLPP6Q8IY26 295 aa12.8□□□□□ -0.36
LINC02553-201ENST00000529088 DSG2Q14126 1118 aa12.78□□□□□ -0.36
LINC02553-201ENST00000529088 FOXK1P85037 733 aa12.77□□□□□ -0.37
LINC02553-201ENST00000529088 GPHNQ9NQX3 736 aaPredicted RBP12.77□□□□□ -0.37
LINC02553-201ENST00000529088 KDM4FA0A1W2PPD8 638 aa12.76□□□□□ -0.37
LINC02553-201ENST00000529088 PTGER2P43116 358 aa12.75□□□□□ -0.37
LINC02553-201ENST00000529088 PTCD2Q8WV60 388 aaKnown RBP12.75□□□□□ -0.37
LINC02553-201ENST00000529088 PBX2P40425 430 aa12.74□□□□□ -0.37
LINC02553-201ENST00000529088 PSEN2P49810 448 aa12.71□□□□□ -0.37
LINC02553-201ENST00000529088 ARHGAP33O14559 1287 aa12.69□□□□□ -0.38
LINC02553-201ENST00000529088 DMRTA1Q5VZB9 504 aa12.69□□□□□ -0.38
LINC02553-201ENST00000529088 UPF1Q92900 1129 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC02553-201ENST00000529088 ADGRD1Q6QNK2 874 aa12.67□□□□□ -0.38
LINC02553-201ENST00000529088 PSDA5PKW4 1024 aaPredicted RBP12.63□□□□□ -0.39
LINC02553-201ENST00000529088 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
LINC02553-201ENST00000529088 TBC1D12O60347 775 aa12.61□□□□□ -0.39
LINC02553-201ENST00000529088 CRISPLD2Q9H0B8 497 aa12.61□□□□□ -0.39
LINC02553-201ENST00000529088 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
LINC02553-201ENST00000529088 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
LINC02553-201ENST00000529088 NCKAP5LQ9HCH0 1330 aa12.6□□□□□ -0.39
LINC02553-201ENST00000529088 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
LINC02553-201ENST00000529088 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
LINC02553-201ENST00000529088 HRO43593 1189 aa12.57□□□□□ -0.4
LINC02553-201ENST00000529088 GTPBP6O43824 516 aaPredicted RBP12.55□□□□□ -0.4
LINC02553-201ENST00000529088 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
LINC02553-201ENST00000529088 ZNF454Q8N9F8 522 aa12.54□□□□□ -0.4
LINC02553-201ENST00000529088 TK2O00142 265 aa12.52□□□□□ -0.41
LINC02553-201ENST00000529088 RYDENQ9NUL5 291 aaKnown RBP12.52□□□□□ -0.41
LINC02553-201ENST00000529088 KCTD12Q96CX2 325 aaKnown RBP12.51□□□□□ -0.41
LINC02553-201ENST00000529088 HCSTQ9UBK5 93 aa12.51□□□□□ -0.41
LINC02553-201ENST00000529088 LARP6Q9BRS8 491 aaKnown RBP12.5□□□□□ -0.41
LINC02553-201ENST00000529088 PLA2G2EQ9NZK7 142 aa12.5□□□□□ -0.41
LINC02553-201ENST00000529088 PDE4AP27815 886 aa12.49□□□□□ -0.41
LINC02553-201ENST00000529088 VPS9D1Q9Y2B5 631 aa12.46□□□□□ -0.41
LINC02553-201ENST00000529088 KCNH8Q96L42 1107 aa12.45□□□□□ -0.42
LINC02553-201ENST00000529088 STAC3Q96MF2 364 aa12.45□□□□□ -0.42
LINC02553-201ENST00000529088 EVI5O60447 810 aa12.44□□□□□ -0.42
LINC02553-201ENST00000529088 FOSBP53539 338 aa12.44□□□□□ -0.42
LINC02553-201ENST00000529088 DDX27Q96GQ7 796 aaKnown RBP12.44□□□□□ -0.42
LINC02553-201ENST00000529088 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
LINC02553-201ENST00000529088 BCL2L12Q9HB09 334 aa12.43□□□□□ -0.42
LINC02553-201ENST00000529088 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
LINC02553-201ENST00000529088 PTPN5P54829 565 aa12.4□□□□□ -0.42
LINC02553-201ENST00000529088 ADAM33Q9BZ11 813 aa12.4□□□□□ -0.42
LINC02553-201ENST00000529088 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.42
LINC02553-201ENST00000529088 PTPREP23469 700 aa12.38□□□□□ -0.43
LINC02553-201ENST00000529088 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
LINC02553-201ENST00000529088 MFSD10Q14728 455 aa12.36□□□□□ -0.43
LINC02553-201ENST00000529088 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
LINC02553-201ENST00000529088 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
LINC02553-201ENST00000529088 ZBED2Q9BTP6 218 aa12.36□□□□□ -0.43
LINC02553-201ENST00000529088 BHMG1C9JSJ3 638 aaPredicted RBP12.34□□□□□ -0.43
LINC02553-201ENST00000529088 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
LINC02553-201ENST00000529088 PCDHGA10Q9Y5H3 936 aa12.3□□□□□ -0.44
LINC02553-201ENST00000529088 PROX2Q3B8N5 592 aa12.28□□□□□ -0.44
LINC02553-201ENST00000529088 THSD4Q6ZMP0 1018 aa12.28□□□□□ -0.44
LINC02553-201ENST00000529088 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
LINC02553-201ENST00000529088 GOLGA8CPA6NN73 597 aa12.27□□□□□ -0.45
LINC02553-201ENST00000529088 COL9A1P20849 921 aa12.27□□□□□ -0.45
LINC02553-201ENST00000529088 WNT2BQ93097 391 aa12.27□□□□□ -0.45
LINC02553-201ENST00000529088 DPYSL4O14531 572 aa12.22□□□□□ -0.45
LINC02553-201ENST00000529088 PPP1R3GB7ZBB8 358 aa12.2□□□□□ -0.46
LINC02553-201ENST00000529088 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
LINC02553-201ENST00000529088 TYW1BQ6NUM6 668 aa12.19□□□□□ -0.46
LINC02553-201ENST00000529088 PHF14O94880 888 aa12.18□□□□□ -0.46
LINC02553-201ENST00000529088 CAMK2BQ13554 666 aa12.17□□□□□ -0.46
LINC02553-201ENST00000529088 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms