RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 ABCC2Q92887 1545 aa11.31□□□□□ -0.6
SOX6-211ENST00000528429 GPATCH8Q9UKJ3 1502 aaKnown RBP11.3□□□□□ -0.6
SOX6-211ENST00000528429 HFM1A2PYH4 1435 aa11.28□□□□□ -0.6
SOX6-211ENST00000528429 ADCY10Q96PN6 1610 aa11.26□□□□□ -0.61
SOX6-211ENST00000528429 NAIPQ13075 1403 aa11.26□□□□□ -0.61
SOX6-211ENST00000528429 CAMSAP2Q08AD1 1489 aa11.26□□□□□ -0.61
SOX6-211ENST00000528429 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
SOX6-211ENST00000528429 ABCC10Q5T3U5 1492 aa11.26□□□□□ -0.61
SOX6-211ENST00000528429 DAPK1P53355 1430 aa11.25□□□□□ -0.61
SOX6-211ENST00000528429 ABCC5O15440 1437 aa11.25□□□□□ -0.61
SOX6-211ENST00000528429 ITSN2Q9NZM3 1697 aa11.24□□□□□ -0.61
SOX6-211ENST00000528429 UHRF1BP1LA0JNW5 1464 aa11.24□□□□□ -0.61
SOX6-211ENST00000528429 TRIM52Q96A61 297 aa11.24□□□□□ -0.61
SOX6-211ENST00000528429 KDM5BQ9UGL1 1544 aa11.23□□□□□ -0.61
SOX6-211ENST00000528429 HNRNPMP52272 730 aaKnown RBP eCLIP11.22□□□□□ -0.61
SOX6-211ENST00000528429 ZCCHC11Q5TAX3 1644 aaKnown RBP11.22□□□□□ -0.61
SOX6-211ENST00000528429 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
SOX6-211ENST00000528429 DNMT1P26358 1616 aaKnown RBP11.21□□□□□ -0.61
SOX6-211ENST00000528429 CDC42BPAQ5VT25 1732 aa11.21□□□□□ -0.61
SOX6-211ENST00000528429 MAPKBP1O60336 1514 aa11.21□□□□□ -0.62
SOX6-211ENST00000528429 SIN3AQ96ST3 1273 aa11.21□□□□□ -0.62
SOX6-211ENST00000528429 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
SOX6-211ENST00000528429 TTC37Q6PGP7 1564 aa11.2□□□□□ -0.62
SOX6-211ENST00000528429 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.19□□□□□ -0.62
SOX6-211ENST00000528429 TSPY4P0CV99 314 aa11.19□□□□□ -0.62
SOX6-211ENST00000528429 TSPY10P0CW01 314 aa11.19□□□□□ -0.62
SOX6-211ENST00000528429 SCAF1Q9H7N4 1312 aaKnown RBP11.19□□□□□ -0.62
SOX6-211ENST00000528429 ARHGAP5Q13017 1502 aa11.19□□□□□ -0.62
SOX6-211ENST00000528429 AKNAQ7Z591 1439 aa11.19□□□□□ -0.62
SOX6-211ENST00000528429 ROCK1Q13464 1354 aa11.18□□□□□ -0.62
SOX6-211ENST00000528429 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
SOX6-211ENST00000528429 KDM6BO15054 1643 aa11.17□□□□□ -0.62
SOX6-211ENST00000528429 ANKRD30AQ9BXX3 1397 aa11.16□□□□□ -0.62
SOX6-211ENST00000528429 WDR7Q9Y4E6 1490 aa11.16□□□□□ -0.62
SOX6-211ENST00000528429 NCOA1Q15788 1441 aa11.16□□□□□ -0.62
SOX6-211ENST00000528429 PREX2Q70Z35 1606 aa11.16□□□□□ -0.62
SOX6-211ENST00000528429 CYB5RLQ6IPT4 315 aa11.15□□□□□ -0.62
SOX6-211ENST00000528429 GCC2Q8IWJ2 1684 aa11.15□□□□□ -0.62
SOX6-211ENST00000528429 C9orf84Q5VXU9 1444 aa11.15□□□□□ -0.62
SOX6-211ENST00000528429 EFCAB2Q5VUJ9 269 aa11.15□□□□□ -0.62
SOX6-211ENST00000528429 ASXL2Q76L83 1435 aa11.15□□□□□ -0.62
SOX6-211ENST00000528429 CDC42BPBQ9Y5S2 1711 aa11.15□□□□□ -0.63
SOX6-211ENST00000528429 SAMD9LQ8IVG5 1584 aa11.14□□□□□ -0.63
SOX6-211ENST00000528429 FOXD1Q16676 465 aa11.13□□□□□ -0.63
SOX6-211ENST00000528429 TIMELESSQ9UNS1 1208 aa11.13□□□□□ -0.63
SOX6-211ENST00000528429 SYCP2Q9BX26 1530 aa11.13□□□□□ -0.63
SOX6-211ENST00000528429 PLCH2O75038 1416 aa11.13□□□□□ -0.63
SOX6-211ENST00000528429 MBD5Q9P267 1494 aa11.13□□□□□ -0.63
SOX6-211ENST00000528429 MPHOSPH9Q99550 1183 aa11.12□□□□□ -0.63
SOX6-211ENST00000528429 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
SOX6-211ENST00000528429 MYO5CQ9NQX4 1742 aa11.12□□□□□ -0.63
SOX6-211ENST00000528429 SLC4A1APQ9BWU0 796 aaKnown RBP11.12□□□□□ -0.63
SOX6-211ENST00000528429 ADGRL2O95490 1459 aa11.11□□□□□ -0.63
SOX6-211ENST00000528429 KIF15Q9NS87 1388 aa11.11□□□□□ -0.63
SOX6-211ENST00000528429 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
SOX6-211ENST00000528429 ANKRD50Q9ULJ7 1429 aa11.11□□□□□ -0.63
SOX6-211ENST00000528429 CROCC2H7BZ55 1655 aa11.11□□□□□ -0.63
SOX6-211ENST00000528429 RSPH4AQ5TD94 716 aa11.11□□□□□ -0.63
SOX6-211ENST00000528429 SHANK2Q9UPX8 1470 aa11.1□□□□□ -0.63
SOX6-211ENST00000528429 ADGBQ8N7X0 1667 aa11.09□□□□□ -0.63
SOX6-211ENST00000528429 ARHGEF5Q12774 1597 aa11.09□□□□□ -0.63
SOX6-211ENST00000528429 PLEKHH2Q8IVE3 1493 aa11.09□□□□□ -0.63
SOX6-211ENST00000528429 TONSLQ96HA7 1378 aa11.08□□□□□ -0.63
SOX6-211ENST00000528429 ARHGEF12Q9NZN5 1544 aa11.08□□□□□ -0.64
SOX6-211ENST00000528429 AFAP1Q8N556 730 aa11.08□□□□□ -0.64
SOX6-211ENST00000528429 PODXL2Q9NZ53 605 aa11.08□□□□□ -0.64
SOX6-211ENST00000528429 MYT1LQ9UL68 1186 aa11.08□□□□□ -0.64
SOX6-211ENST00000528429 KIAA1107Q9UPP5 1409 aa11.08□□□□□ -0.64
SOX6-211ENST00000528429 DENND4BO75064 1496 aaPredicted RBP11.07□□□□□ -0.64
SOX6-211ENST00000528429 TRAPPC8Q9Y2L5 1435 aa11.06□□□□□ -0.64
SOX6-211ENST00000528429 FANCAO15360 1455 aa11.06□□□□□ -0.64
SOX6-211ENST00000528429 NUP155O75694 1391 aa11.06□□□□□ -0.64
SOX6-211ENST00000528429 ACIN1Q9UKV3 1341 aaKnown RBP11.06□□□□□ -0.64
SOX6-211ENST00000528429 DIEXFQ68CQ4 756 aaKnown RBP11.05□□□□□ -0.64
SOX6-211ENST00000528429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
SOX6-211ENST00000528429 SPAG9O60271 1321 aaKnown RBP11.04□□□□□ -0.64
SOX6-211ENST00000528429 PKD2Q13563 968 aa11.04□□□□□ -0.64
SOX6-211ENST00000528429 ABCC1P33527 1531 aa11.04□□□□□ -0.64
SOX6-211ENST00000528429 RIMBP3CA6NJZ7 1639 aa11.04□□□□□ -0.64
SOX6-211ENST00000528429 RIMBP3BA6NNM3 1639 aa11.04□□□□□ -0.64
SOX6-211ENST00000528429 RIMBP3Q9UFD9 1639 aa11.04□□□□□ -0.64
SOX6-211ENST00000528429 ABCA9Q8IUA7 1624 aa11.04□□□□□ -0.64
SOX6-211ENST00000528429 PZPP20742 1482 aa11.03□□□□□ -0.64
SOX6-211ENST00000528429 CD109Q6YHK3 1445 aa11.03□□□□□ -0.64
SOX6-211ENST00000528429 PPP1R15AO75807 674 aaPredicted RBP11.02□□□□□ -0.64
SOX6-211ENST00000528429 ARXQ96QS3 562 aa11.02□□□□□ -0.64
SOX6-211ENST00000528429 SCAPERQ9BY12 1400 aa11.02□□□□□ -0.64
SOX6-211ENST00000528429 ADGRL1O94910 1474 aa11.02□□□□□ -0.65
SOX6-211ENST00000528429 AEBP2Q6ZN18 517 aaPredicted RBP11.02□□□□□ -0.65
SOX6-211ENST00000528429 ARAP3Q8WWN8 1544 aa11.01□□□□□ -0.65
SOX6-211ENST00000528429 ANKRD30BQ9BXX2 1392 aa11.01□□□□□ -0.65
SOX6-211ENST00000528429 MAST1Q9Y2H9 1570 aa10.99□□□□□ -0.65
SOX6-211ENST00000528429 L3MBTL2Q969R5 705 aa10.98□□□□□ -0.65
SOX6-211ENST00000528429 HIRIP3Q9BW71 556 aaPredicted RBP10.97□□□□□ -0.65
SOX6-211ENST00000528429 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
SOX6-211ENST00000528429 DUOX2Q9NRD8 1548 aa10.97□□□□□ -0.65
SOX6-211ENST00000528429 PLXNC1O60486 1568 aa10.97□□□□□ -0.65
SOX6-211ENST00000528429 ZFYVE16Q7Z3T8 1539 aa10.95□□□□□ -0.66
SOX6-211ENST00000528429 RPRD2Q5VT52 1461 aaKnown RBP10.95□□□□□ -0.66
SOX6-211ENST00000528429 RAPGEF3O95398 923 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms