RNA–Protein interactions for RNA: ENST00000527655.5

EDRF1-212, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 3

Gene EDRF1, Length 851 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-212ENST00000527655 HOXB1P14653 301 aaPredicted RBP16■□□□□ 0.15
EDRF1-212ENST00000527655 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
EDRF1-212ENST00000527655 KRTAP3-3Q9BYR6 98 aa15.99■□□□□ 0.15
EDRF1-212ENST00000527655 KRTAP3-2Q9BYR7 98 aa15.99■□□□□ 0.15
EDRF1-212ENST00000527655 SPNS2Q8IVW8 549 aa15.98■□□□□ 0.15
EDRF1-212ENST00000527655 ZNF710Q8N1W2 664 aa15.96■□□□□ 0.15
EDRF1-212ENST00000527655 MMRN1Q13201 1228 aa15.91■□□□□ 0.14
EDRF1-212ENST00000527655 GPR153Q6NV75 609 aa15.88■□□□□ 0.13
EDRF1-212ENST00000527655 KIF3CO14782 793 aa15.85■□□□□ 0.13
EDRF1-212ENST00000527655 RIMBP2O15034 1052 aa15.85■□□□□ 0.13
EDRF1-212ENST00000527655 ZSWIM6Q9HCJ5 1215 aa15.84■□□□□ 0.13
EDRF1-212ENST00000527655 ERBB3P21860 1342 aa15.83■□□□□ 0.12
EDRF1-212ENST00000527655 PPP1R37O75864 691 aa15.82■□□□□ 0.12
EDRF1-212ENST00000527655 C2orf72A6NCS6 295 aa15.8■□□□□ 0.12
EDRF1-212ENST00000527655 VARS2Q5ST30 1063 aaKnown RBP15.79■□□□□ 0.12
EDRF1-212ENST00000527655 ARSIQ5FYB1 569 aa15.77■□□□□ 0.12
EDRF1-212ENST00000527655 KHSRPQ92945 711 aaKnown RBP eCLIP15.77■□□□□ 0.12
EDRF1-212ENST00000527655 HS6ST3Q8IZP7 471 aa15.73■□□□□ 0.11
EDRF1-212ENST00000527655 ZNF687Q8N1G0 1237 aa15.67■□□□□ 0.1
EDRF1-212ENST00000527655 ZNF316A6NFI3 1004 aaPredicted RBP15.63■□□□□ 0.09
EDRF1-212ENST00000527655 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
EDRF1-212ENST00000527655 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
EDRF1-212ENST00000527655 TMC2Q8TDI7 906 aa15.62■□□□□ 0.09
EDRF1-212ENST00000527655 SLC34A2O95436 690 aa15.61■□□□□ 0.09
EDRF1-212ENST00000527655 NUDT7P0C024 238 aa15.59■□□□□ 0.09
EDRF1-212ENST00000527655 PCDHGA4Q9Y5G9 962 aa15.58■□□□□ 0.08
EDRF1-212ENST00000527655 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
EDRF1-212ENST00000527655 LHX6Q9UPM6 363 aa15.51■□□□□ 0.07
EDRF1-212ENST00000527655 POTEEQ6S8J3 1075 aa15.49■□□□□ 0.07
EDRF1-212ENST00000527655 KDM4FA0A1W2PPD8 638 aa15.48■□□□□ 0.07
EDRF1-212ENST00000527655 FOXK1P85037 733 aa15.48■□□□□ 0.07
EDRF1-212ENST00000527655 GPHNQ9NQX3 736 aaPredicted RBP15.48■□□□□ 0.07
EDRF1-212ENST00000527655 DSG2Q14126 1118 aa15.46■□□□□ 0.07
EDRF1-212ENST00000527655 PLPP6Q8IY26 295 aa15.45■□□□□ 0.06
EDRF1-212ENST00000527655 PTCD2Q8WV60 388 aaKnown RBP15.44■□□□□ 0.06
EDRF1-212ENST00000527655 RNF166Q96A37 237 aaPredicted RBP15.43■□□□□ 0.06
EDRF1-212ENST00000527655 LSM11P83369 360 aaKnown RBP eCLIP15.41■□□□□ 0.06
EDRF1-212ENST00000527655 MYT1LQ9UL68 1186 aa15.41■□□□□ 0.06
EDRF1-212ENST00000527655 ANKRD13DQ6ZTN6 518 aa15.4■□□□□ 0.06
EDRF1-212ENST00000527655 AXIN2Q9Y2T1 843 aa15.39■□□□□ 0.05
EDRF1-212ENST00000527655 PBX2P40425 430 aa15.35■□□□□ 0.05
EDRF1-212ENST00000527655 CRISPLD2Q9H0B8 497 aa15.35■□□□□ 0.05
EDRF1-212ENST00000527655 GTPBP6O43824 516 aaPredicted RBP15.33■□□□□ 0.04
EDRF1-212ENST00000527655 NCKAP5LQ9HCH0 1330 aa15.31■□□□□ 0.04
EDRF1-212ENST00000527655 PTGER2P43116 358 aa15.3■□□□□ 0.04
EDRF1-212ENST00000527655 RYDENQ9NUL5 291 aaKnown RBP15.3■□□□□ 0.04
EDRF1-212ENST00000527655 OXER1Q8TDS5 423 aa15.27■□□□□ 0.04
EDRF1-212ENST00000527655 PSDA5PKW4 1024 aaPredicted RBP15.25■□□□□ 0.03
EDRF1-212ENST00000527655 ARHGAP33O14559 1287 aa15.24■□□□□ 0.03
EDRF1-212ENST00000527655 PPP1R15BQ5SWA1 713 aa15.24■□□□□ 0.03
EDRF1-212ENST00000527655 UPF1Q92900 1129 aaKnown RBP eCLIP15.22■□□□□ 0.03
EDRF1-212ENST00000527655 PSEN2P49810 448 aa15.21■□□□□ 0.03
EDRF1-212ENST00000527655 DMRTA1Q5VZB9 504 aa15.21■□□□□ 0.03
EDRF1-212ENST00000527655 TBC1D12O60347 775 aa15.2■□□□□ 0.02
EDRF1-212ENST00000527655 ADGRD1Q6QNK2 874 aa15.18■□□□□ 0.02
EDRF1-212ENST00000527655 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
EDRF1-212ENST00000527655 PDE4AP27815 886 aa15.16■□□□□ 0.02
EDRF1-212ENST00000527655 PPP4R3BQ5MIZ7 849 aa15.15■□□□□ 0.02
EDRF1-212ENST00000527655 HRO43593 1189 aa15.12■□□□□ 0.01
EDRF1-212ENST00000527655 LARP6Q9BRS8 491 aaKnown RBP15.12■□□□□ 0.01
EDRF1-212ENST00000527655 TK2O00142 265 aa15.11■□□□□ 0.01
EDRF1-212ENST00000527655 MFSD10Q14728 455 aa15.11■□□□□ 0.01
EDRF1-212ENST00000527655 CADPS2Q86UW7 1296 aa15.11■□□□□ 0.01
EDRF1-212ENST00000527655 KCNK17Q96T54 332 aa15.08■□□□□ 0
EDRF1-212ENST00000527655 ZNF454Q8N9F8 522 aa15.07■□□□□ 0
EDRF1-212ENST00000527655 DDX27Q96GQ7 796 aaKnown RBP15.07■□□□□ 0
EDRF1-212ENST00000527655 ANO8Q9HCE9 1232 aaPredicted RBP15.07■□□□□ 0
EDRF1-212ENST00000527655 FOSBP53539 338 aa15.06■□□□□ 0
EDRF1-212ENST00000527655 EMILIN3Q9NT22 766 aa15.04■□□□□ -0
EDRF1-212ENST00000527655 EVI5O60447 810 aa15.02■□□□□ -0
EDRF1-212ENST00000527655 BCL2L12Q9HB09 334 aa15.02■□□□□ -0
EDRF1-212ENST00000527655 VPS9D1Q9Y2B5 631 aa14.99□□□□□ -0.01
EDRF1-212ENST00000527655 JPH4Q96JJ6 628 aa14.98□□□□□ -0.01
EDRF1-212ENST00000527655 ADAM33Q9BZ11 813 aa14.95□□□□□ -0.02
EDRF1-212ENST00000527655 HCSTQ9UBK5 93 aa14.95□□□□□ -0.02
EDRF1-212ENST00000527655 MAP3K9P80192 1104 aa14.93□□□□□ -0.02
EDRF1-212ENST00000527655 SLC4A5Q9BY07 1137 aa14.92□□□□□ -0.02
EDRF1-212ENST00000527655 ZDHHC16Q969W1 377 aa14.91□□□□□ -0.02
EDRF1-212ENST00000527655 KCTD12Q96CX2 325 aaKnown RBP14.91□□□□□ -0.02
EDRF1-212ENST00000527655 KCNH8Q96L42 1107 aa14.91□□□□□ -0.02
EDRF1-212ENST00000527655 ZBED2Q9BTP6 218 aa14.91□□□□□ -0.02
EDRF1-212ENST00000527655 PTPREP23469 700 aa14.9□□□□□ -0.02
EDRF1-212ENST00000527655 BHMG1C9JSJ3 638 aaPredicted RBP14.88□□□□□ -0.03
EDRF1-212ENST00000527655 PCDHGA10Q9Y5H3 936 aa14.88□□□□□ -0.03
EDRF1-212ENST00000527655 CAMK2BQ13554 666 aa14.87□□□□□ -0.03
EDRF1-212ENST00000527655 BBXQ8WY36 941 aaPredicted RBP14.87□□□□□ -0.03
EDRF1-212ENST00000527655 PLA2G2EQ9NZK7 142 aa14.85□□□□□ -0.03
EDRF1-212ENST00000527655 STAC3Q96MF2 364 aa14.8□□□□□ -0.04
EDRF1-212ENST00000527655 DPYSL4O14531 572 aa14.79□□□□□ -0.04
EDRF1-212ENST00000527655 COL9A1P20849 921 aa14.79□□□□□ -0.04
EDRF1-212ENST00000527655 PHF14O94880 888 aa14.76□□□□□ -0.05
EDRF1-212ENST00000527655 PPP1R3GB7ZBB8 358 aa14.75□□□□□ -0.05
EDRF1-212ENST00000527655 PROX2Q3B8N5 592 aa14.75□□□□□ -0.05
EDRF1-212ENST00000527655 TYW1BQ6NUM6 668 aa14.75□□□□□ -0.05
EDRF1-212ENST00000527655 RTN4Q9NQC3 1192 aaKnown RBP14.74□□□□□ -0.05
EDRF1-212ENST00000527655 PTPN5P54829 565 aa14.73□□□□□ -0.05
EDRF1-212ENST00000527655 THSD4Q6ZMP0 1018 aa14.73□□□□□ -0.05
EDRF1-212ENST00000527655 MRPL50Q8N5N7 158 aaKnown RBP14.71□□□□□ -0.05
EDRF1-212ENST00000527655 FBXW7Q969H0 707 aa14.71□□□□□ -0.05
EDRF1-212ENST00000527655 AMER1Q5JTC6 1135 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms