RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ZNF467Q7Z7K2 595 aaPredicted RBP6.69□□□□□ -1.34
SKP1-209ENST00000522552 IL27Q8NEV9 243 aa6.69□□□□□ -1.34
SKP1-209ENST00000522552 SGIP1Q9BQI5 828 aa6.69□□□□□ -1.34
SKP1-209ENST00000522552 VGFO15240 615 aaPredicted RBP6.68□□□□□ -1.34
SKP1-209ENST00000522552 GPBP1L1Q9HC44 474 aaPredicted RBP6.68□□□□□ -1.34
SKP1-209ENST00000522552 BMP2KQ9NSY1 1161 aaPredicted RBP6.68□□□□□ -1.34
SKP1-209ENST00000522552 TMEM106CQ9BVX2 250 aa6.67□□□□□ -1.34
SKP1-209ENST00000522552 STK24Q9Y6E0 443 aa6.67□□□□□ -1.34
SKP1-209ENST00000522552 TESPA1A2RU30 521 aaPredicted RBP6.66□□□□□ -1.34
SKP1-209ENST00000522552 SEMA3EO15041 775 aa6.66□□□□□ -1.34
SKP1-209ENST00000522552 ARHGEF1Q92888 912 aaKnown RBP6.66□□□□□ -1.34
SKP1-209ENST00000522552 BCL11BQ9C0K0 894 aaPredicted RBP6.66□□□□□ -1.34
SKP1-209ENST00000522552 TTLL13PA6NNM8 815 aa6.65□□□□□ -1.34
SKP1-209ENST00000522552 PSEN1P49768 467 aa6.65□□□□□ -1.34
SKP1-209ENST00000522552 ATN1P54259 1190 aaPredicted RBP6.65□□□□□ -1.34
SKP1-209ENST00000522552 MKRN3Q13064 507 aaKnown RBP6.65□□□□□ -1.34
SKP1-209ENST00000522552 ATMINO43313 823 aaPredicted RBP6.65□□□□□ -1.35
SKP1-209ENST00000522552 TIE1P35590 1138 aa6.64□□□□□ -1.35
SKP1-209ENST00000522552 PDAP1Q13442 181 aaKnown RBP6.64□□□□□ -1.35
SKP1-209ENST00000522552 SPNS2Q8IVW8 549 aa6.64□□□□□ -1.35
SKP1-209ENST00000522552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.63□□□□□ -1.35
SKP1-209ENST00000522552 POTEB2H3BUK9 544 aa6.63□□□□□ -1.35
SKP1-209ENST00000522552 ASTLQ6HA08 431 aaPredicted RBP6.63□□□□□ -1.35
SKP1-209ENST00000522552 BARGINQ6ZT62 677 aa6.63□□□□□ -1.35
SKP1-209ENST00000522552 ZFP91Q96JP5 570 aaPredicted RBP6.63□□□□□ -1.35
SKP1-209ENST00000522552 KCTD17Q8N5Z5 321 aa6.62□□□□□ -1.35
SKP1-209ENST00000522552 KDM4CQ9H3R0 1056 aa6.62□□□□□ -1.35
SKP1-209ENST00000522552 TRIM35Q9UPQ4 493 aa6.62□□□□□ -1.35
SKP1-209ENST00000522552 AK7Q96M32 723 aa6.61□□□□□ -1.35
SKP1-209ENST00000522552 IGSF3O75054 1194 aa6.6□□□□□ -1.35
SKP1-209ENST00000522552 CCDC82Q8N4S0 544 aa6.6□□□□□ -1.35
SKP1-209ENST00000522552 CABP2Q9NPB3 220 aa6.6□□□□□ -1.35
SKP1-209ENST00000522552 SHROOM4Q9ULL8 1493 aa6.59□□□□□ -1.36
SKP1-209ENST00000522552 TTBK1Q5TCY1 1321 aaPredicted RBP6.58□□□□□ -1.36
SKP1-209ENST00000522552 RAD21O60216 631 aa6.58□□□□□ -1.36
SKP1-209ENST00000522552 GOLGA2Q08379 1002 aa6.58□□□□□ -1.36
SKP1-209ENST00000522552 MAMSTRQ6ZN01 415 aa6.58□□□□□ -1.36
SKP1-209ENST00000522552 MYT1Q01538 1121 aa6.58□□□□□ -1.36
SKP1-209ENST00000522552 E2F4Q16254 413 aa6.57□□□□□ -1.36
SKP1-209ENST00000522552 METRNQ9UJH8 293 aa6.57□□□□□ -1.36
SKP1-209ENST00000522552 RGS22Q8NE09 1264 aa6.56□□□□□ -1.36
SKP1-209ENST00000522552 TRAIPQ9BWF2 469 aa6.55□□□□□ -1.36
SKP1-209ENST00000522552 FLIIQ13045 1269 aa6.55□□□□□ -1.36
SKP1-209ENST00000522552 SMYD5Q6GMV2 418 aa6.55□□□□□ -1.36
SKP1-209ENST00000522552 EFCAB3Q8N7B9 438 aa6.55□□□□□ -1.36
SKP1-209ENST00000522552 SLC39A7Q92504 469 aa6.55□□□□□ -1.36
SKP1-209ENST00000522552 SEC24BO95487 1268 aa6.54□□□□□ -1.36
SKP1-209ENST00000522552 C7P10643 843 aa6.53□□□□□ -1.36
SKP1-209ENST00000522552 COLQQ9Y215 455 aaPredicted RBP6.53□□□□□ -1.36
SKP1-209ENST00000522552 PDE4DQ08499 809 aa6.52□□□□□ -1.37
SKP1-209ENST00000522552 MTMR7Q9Y216 660 aa6.52□□□□□ -1.37
SKP1-209ENST00000522552 POTEFA5A3E0 1075 aa6.52□□□□□ -1.37
SKP1-209ENST00000522552 TRIM66O15016 1216 aa6.52□□□□□ -1.37
SKP1-209ENST00000522552 TRAK2O60296 914 aa6.52□□□□□ -1.37
SKP1-209ENST00000522552 AEBP1Q8IUX7 1158 aa6.52□□□□□ -1.37
SKP1-209ENST00000522552 KRI1Q8N9T8 703 aaKnown RBP6.52□□□□□ -1.37
SKP1-209ENST00000522552 FAM117AQ9C073 453 aa6.52□□□□□ -1.37
SKP1-209ENST00000522552 ZNF316A6NFI3 1004 aaPredicted RBP6.51□□□□□ -1.37
SKP1-209ENST00000522552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.51□□□□□ -1.373e-9■■□□□ 13.9
SKP1-209ENST00000522552 A6NJR5 290 aa6.5□□□□□ -1.37
SKP1-209ENST00000522552 ONECUT3O60422 494 aaPredicted RBP6.5□□□□□ -1.37
SKP1-209ENST00000522552 PLCG2P16885 1265 aa6.5□□□□□ -1.37
SKP1-209ENST00000522552 IRX5P78411 483 aaPredicted RBP6.5□□□□□ -1.37
SKP1-209ENST00000522552 IER5LQ5T953 404 aa6.5□□□□□ -1.37
SKP1-209ENST00000522552 CLUAP1Q96AJ1 413 aa6.5□□□□□ -1.37
SKP1-209ENST00000522552 TMCO4Q5TGY1 634 aa6.49□□□□□ -1.37
SKP1-209ENST00000522552 ZNF428Q96B54 188 aa6.49□□□□□ -1.37
SKP1-209ENST00000522552 PHF8Q9UPP1 1060 aa6.49□□□□□ -1.37
SKP1-209ENST00000522552 DPY19L2Q6NUT2 758 aa6.48□□□□□ -1.37
SKP1-209ENST00000522552 GPIHBP1Q8IV16 184 aa6.48□□□□□ -1.37
SKP1-209ENST00000522552 OCEL1Q9H607 264 aa6.48□□□□□ -1.37
SKP1-209ENST00000522552 PLEKHG3A1L390 1219 aa6.47□□□□□ -1.37
SKP1-209ENST00000522552 RBM25P49756 843 aaKnown RBP6.47□□□□□ -1.37
SKP1-209ENST00000522552 MFAP1P55081 439 aaKnown RBP6.47□□□□□ -1.37
SKP1-209ENST00000522552 RBM26Q5T8P6 1007 aaKnown RBP6.47□□□□□ -1.37
SKP1-209ENST00000522552 FOXD4L5Q5VV16 416 aaPredicted RBP6.47□□□□□ -1.37
SKP1-209ENST00000522552 PDCD7Q8N8D1 485 aaKnown RBP6.47□□□□□ -1.37
SKP1-209ENST00000522552 FOXD4L4Q8WXT5 416 aaPredicted RBP6.47□□□□□ -1.37
SKP1-209ENST00000522552 MFRPQ9BY79 579 aa6.45□□□□□ -1.38
SKP1-209ENST00000522552 SOX12O15370 315 aa6.45□□□□□ -1.38
SKP1-209ENST00000522552 EIF5BO60841 1220 aaKnown RBP6.45□□□□□ -1.38
SKP1-209ENST00000522552 POTEJP0CG39 1038 aa6.45□□□□□ -1.38
SKP1-209ENST00000522552 GZF1Q9H116 711 aaPredicted RBP6.45□□□□□ -1.38
SKP1-209ENST00000522552 HMGB1P09429 215 aaKnown RBP6.44□□□□□ -1.38
SKP1-209ENST00000522552 DDRGK1Q96HY6 314 aa6.44□□□□□ -1.38
SKP1-209ENST00000522552 MS4A4AQ96JQ5 239 aa6.44□□□□□ -1.38
SKP1-209ENST00000522552 CDK11BP21127 795 aaKnown RBP6.42□□□□□ -1.38
SKP1-209ENST00000522552 NLRP6P59044 892 aa6.42□□□□□ -1.38
SKP1-209ENST00000522552 FBXO22Q8NEZ5 403 aa6.42□□□□□ -1.38
SKP1-209ENST00000522552 CDK11AQ9UQ88 783 aaPredicted RBP6.42□□□□□ -1.38
SKP1-209ENST00000522552 HSP90B1P14625 803 aaKnown RBP6.42□□□□□ -1.38
SKP1-209ENST00000522552 ILDR1Q86SU0 546 aaPredicted RBP6.42□□□□□ -1.38
SKP1-209ENST00000522552 SCUBE2Q9NQ36 999 aa6.42□□□□□ -1.38
SKP1-209ENST00000522552 ZNF777Q9ULD5 760 aaPredicted RBP6.42□□□□□ -1.38
SKP1-209ENST00000522552 PPP1R37O75864 691 aa6.41□□□□□ -1.38
SKP1-209ENST00000522552 RETREG2Q8NC44 543 aa6.41□□□□□ -1.38
SKP1-209ENST00000522552 ARIH1Q9Y4X5 557 aaPredicted RBP6.41□□□□□ -1.38
SKP1-209ENST00000522552 MLLT3P42568 568 aaPredicted RBP6.4□□□□□ -1.38
SKP1-209ENST00000522552 CCDC97Q96F63 343 aaPredicted RBP6.4□□□□□ -1.38
SKP1-209ENST00000522552 SERPINA10Q9UK55 444 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms