RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 SIN3AQ96ST3 1273 aa37.64■■■■□ 3.62
COL13A1-214ENST00000522165 ROCK1Q13464 1354 aa37.64■■■■□ 3.62
COL13A1-214ENST00000522165 ABCC10Q5T3U5 1492 aa37.63■■■■□ 3.61
COL13A1-214ENST00000522165 KDM6BO15054 1643 aa37.57■■■■□ 3.61
COL13A1-214ENST00000522165 TIMELESSQ9UNS1 1208 aa37.57■■■■□ 3.6
COL13A1-214ENST00000522165 CDC42BPAQ5VT25 1732 aa37.56■■■■□ 3.6
COL13A1-214ENST00000522165 NEUROD1Q13562 356 aa37.56■■■■□ 3.6
COL13A1-214ENST00000522165 ABCC2Q92887 1545 aa37.52■■■■□ 3.6
COL13A1-214ENST00000522165 ZNF777Q9ULD5 760 aaPredicted RBP37.48■■■■□ 3.59
COL13A1-214ENST00000522165 CROCC2H7BZ55 1655 aa37.44■■■■□ 3.58
COL13A1-214ENST00000522165 ACIN1Q9UKV3 1341 aaKnown RBP37.43■■■■□ 3.58
COL13A1-214ENST00000522165 ADGBQ8N7X0 1667 aa37.41■■■■□ 3.58
COL13A1-214ENST00000522165 TRIM52Q96A61 297 aa37.41■■■■□ 3.58
COL13A1-214ENST00000522165 DENND4BO75064 1496 aaPredicted RBP37.39■■■■□ 3.58
COL13A1-214ENST00000522165 ADGRL2O95490 1459 aa37.39■■■■□ 3.58
COL13A1-214ENST00000522165 NCOA1Q15788 1441 aa37.37■■■■□ 3.57
COL13A1-214ENST00000522165 UHRF1BP1LA0JNW5 1464 aa37.36■■■■□ 3.57
COL13A1-214ENST00000522165 PREX2Q70Z35 1606 aa37.32■■■■□ 3.56
COL13A1-214ENST00000522165 PPP1R15AO75807 674 aaPredicted RBP37.32■■■■□ 3.56
COL13A1-214ENST00000522165 MPHOSPH9Q99550 1183 aa37.31■■■■□ 3.56
COL13A1-214ENST00000522165 TONSLQ96HA7 1378 aa37.3■■■■□ 3.56
COL13A1-214ENST00000522165 SHANK2Q9UPX8 1470 aa37.3■■■■□ 3.56
COL13A1-214ENST00000522165 CDC42BPBQ9Y5S2 1711 aa37.29■■■■□ 3.56
COL13A1-214ENST00000522165 ANKRD30AQ9BXX3 1397 aa37.27■■■■□ 3.56
COL13A1-214ENST00000522165 ZCCHC11Q5TAX3 1644 aaKnown RBP37.25■■■■□ 3.55
COL13A1-214ENST00000522165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.25■■■■□ 3.55
COL13A1-214ENST00000522165 KDM5BQ9UGL1 1544 aa37.25■■■■□ 3.55
COL13A1-214ENST00000522165 ARHGEF5Q12774 1597 aa37.25■■■■□ 3.55
COL13A1-214ENST00000522165 TTC37Q6PGP7 1564 aa37.25■■■■□ 3.55
COL13A1-214ENST00000522165 SAMD9LQ8IVG5 1584 aa37.22■■■■□ 3.55
COL13A1-214ENST00000522165 C9orf84Q5VXU9 1444 aa37.21■■■■□ 3.55
COL13A1-214ENST00000522165 MBD5Q9P267 1494 aa37.21■■■■□ 3.55
COL13A1-214ENST00000522165 HNRNPMP52272 730 aaKnown RBP eCLIP37.16■■■■□ 3.54
COL13A1-214ENST00000522165 TSPY4P0CV99 314 aa37.14■■■■□ 3.54
COL13A1-214ENST00000522165 TSPY10P0CW01 314 aa37.14■■■■□ 3.54
COL13A1-214ENST00000522165 MIER1Q8N108 512 aa37.14■■■■□ 3.54
COL13A1-214ENST00000522165 MYO5CQ9NQX4 1742 aa37.12■■■■□ 3.53
COL13A1-214ENST00000522165 ARHGAP5Q13017 1502 aa37.12■■■■□ 3.53
COL13A1-214ENST00000522165 ANKRD50Q9ULJ7 1429 aa37.12■■■■□ 3.53
COL13A1-214ENST00000522165 CCDC141Q6ZP82 1450 aa37.11■■■■□ 3.53
COL13A1-214ENST00000522165 PZPP20742 1482 aa37.1■■■■□ 3.53
COL13A1-214ENST00000522165 RSPH4AQ5TD94 716 aa37.09■■■■□ 3.53
COL13A1-214ENST00000522165 KCNH8Q96L42 1107 aa37.08■■■■□ 3.53
COL13A1-214ENST00000522165 SLC4A1APQ9BWU0 796 aaKnown RBP37.08■■■■□ 3.53
COL13A1-214ENST00000522165 ANKRD30BQ9BXX2 1392 aa37.08■■■■□ 3.53
COL13A1-214ENST00000522165 FOXD1Q16676 465 aa37.08■■■■□ 3.53
COL13A1-214ENST00000522165 SYCP2Q9BX26 1530 aa37.04■■■■□ 3.52
COL13A1-214ENST00000522165 OSCARQ8IYS5 282 aa37.01■■■■□ 3.52
COL13A1-214ENST00000522165 PLEKHH2Q8IVE3 1493 aa37■■■■□ 3.51
COL13A1-214ENST00000522165 KIF15Q9NS87 1388 aa37■■■■□ 3.51
COL13A1-214ENST00000522165 PLCH2O75038 1416 aa37■■■■□ 3.51
COL13A1-214ENST00000522165 KIAA1107Q9UPP5 1409 aa37■■■■□ 3.51
COL13A1-214ENST00000522165 RPRD2Q5VT52 1461 aaKnown RBP36.97■■■■□ 3.51
COL13A1-214ENST00000522165 MAST1Q9Y2H9 1570 aa36.96■■■■□ 3.51
COL13A1-214ENST00000522165 KDM5DQ9BY66 1539 aa36.9■■■■□ 3.5
COL13A1-214ENST00000522165 WDR7Q9Y4E6 1490 aa36.89■■■■□ 3.5
COL13A1-214ENST00000522165 EFCAB2Q5VUJ9 269 aa36.88■■■■□ 3.49
COL13A1-214ENST00000522165 ARHGEF12Q9NZN5 1544 aa36.87■■■■□ 3.49
COL13A1-214ENST00000522165 L3MBTL2Q969R5 705 aa36.86■■■■□ 3.49
COL13A1-214ENST00000522165 NUP155O75694 1391 aa36.86■■■■□ 3.49
COL13A1-214ENST00000522165 ARAP3Q8WWN8 1544 aa36.84■■■■□ 3.49
COL13A1-214ENST00000522165 PKD2Q13563 968 aa36.84■■■■□ 3.49
COL13A1-214ENST00000522165 TEX14Q8IWB6 1497 aa36.82■■■■□ 3.49
COL13A1-214ENST00000522165 ABCC1P33527 1531 aa36.82■■■■□ 3.48
COL13A1-214ENST00000522165 PLXNC1O60486 1568 aa36.81■■■■□ 3.48
COL13A1-214ENST00000522165 HIRIP3Q9BW71 556 aaPredicted RBP36.77■■■■□ 3.48
COL13A1-214ENST00000522165 CENPBP07199 599 aaPredicted RBP36.74■■■■□ 3.47
COL13A1-214ENST00000522165 ABCA9Q8IUA7 1624 aa36.73■■■■□ 3.47
COL13A1-214ENST00000522165 ASXL2Q76L83 1435 aa36.72■■■■□ 3.47
COL13A1-214ENST00000522165 TRAPPC8Q9Y2L5 1435 aa36.69■■■■□ 3.46
COL13A1-214ENST00000522165 DUOX2Q9NRD8 1548 aa36.68■■■■□ 3.46
COL13A1-214ENST00000522165 UNC13BO14795 1591 aa36.67■■■■□ 3.46
COL13A1-214ENST00000522165 DDX10Q13206 875 aaKnown RBP36.67■■■■□ 3.46
COL13A1-214ENST00000522165 FAM135AQ9P2D6 1515 aa36.66■■■■□ 3.46
COL13A1-214ENST00000522165 YTHDC1Q96MU7 727 aaKnown RBP36.62■■■■□ 3.45
COL13A1-214ENST00000522165 NBPF8Q3BBV2 869 aa36.61■■■■□ 3.45
COL13A1-214ENST00000522165 ERBINQ96RT1 1412 aa36.6■■■■□ 3.45
COL13A1-214ENST00000522165 FANCAO15360 1455 aa36.6■■■■□ 3.45
COL13A1-214ENST00000522165 NPM1P06748 294 aaKnown RBP eCLIP36.58■■■■□ 3.45
COL13A1-214ENST00000522165 RTEL1-TNFRSF6BF6WH68 1400 aa36.57■■■■□ 3.44
COL13A1-214ENST00000522165 HSPA5P11021 654 aaKnown RBP36.57■■■■□ 3.44
COL13A1-214ENST00000522165 EIF4G2P78344 907 aaKnown RBP eCLIP36.55■■■■□ 3.44
COL13A1-214ENST00000522165 SPAG9O60271 1321 aaKnown RBP36.54■■■■□ 3.44
COL13A1-214ENST00000522165 IQGAP3Q86VI3 1631 aa36.53■■■■□ 3.44
COL13A1-214ENST00000522165 AFAP1Q8N556 730 aa36.52■■■■□ 3.44
COL13A1-214ENST00000522165 MAGI2Q86UL8 1455 aa36.52■■■■□ 3.44
COL13A1-214ENST00000522165 ZFYVE16Q7Z3T8 1539 aa36.52■■■■□ 3.44
COL13A1-214ENST00000522165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.47■■■■□ 3.43
COL13A1-214ENST00000522165 ADGRL1O94910 1474 aa36.46■■■■□ 3.43
COL13A1-214ENST00000522165 SCAPERQ9BY12 1400 aa36.43■■■■□ 3.42
COL13A1-214ENST00000522165 SCAF1Q9H7N4 1312 aaKnown RBP36.43■■■■□ 3.42
COL13A1-214ENST00000522165 INO80Q9ULG1 1556 aaPredicted RBP36.43■■■■□ 3.42
COL13A1-214ENST00000522165 ATP7AQ04656 1500 aa36.4■■■■□ 3.42
COL13A1-214ENST00000522165 UHRF1BP1Q6BDS2 1440 aa36.4■■■■□ 3.42
COL13A1-214ENST00000522165 SPATA31E1Q6ZUB1 1445 aa36.37■■■■□ 3.41
COL13A1-214ENST00000522165 PLA2R1Q13018 1463 aa36.37■■■■□ 3.41
COL13A1-214ENST00000522165 WASHC2AQ641Q2 1341 aa36.36■■■■□ 3.41
COL13A1-214ENST00000522165 CCDC144AA2RUR9 1427 aa36.34■■■■□ 3.41
COL13A1-214ENST00000522165 CD109Q6YHK3 1445 aa36.32■■■■□ 3.4
COL13A1-214ENST00000522165 ATP10AO60312 1499 aa36.29■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms