RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 EHMT2Q96KQ7 1210 aa31.03■■■□□ 2.56
SNHG6-204ENST00000521127 MLECQ14165 292 aa31.02■■■□□ 2.56
SNHG6-204ENST00000521127 ATP1B4Q9UN42 357 aaPredicted RBP31■■■□□ 2.55
SNHG6-204ENST00000521127 UBTFP17480 764 aaKnown RBP30.98■■■□□ 2.55
SNHG6-204ENST00000521127 ARHGAP35Q9NRY4 1499 aa30.96■■■□□ 2.55
SNHG6-204ENST00000521127 FMN1Q68DA7 1419 aa30.96■■■□□ 2.55
SNHG6-204ENST00000521127 EFCAB2Q5VUJ9 269 aa30.95■■■□□ 2.55
SNHG6-204ENST00000521127 FER1L4A9Z1Z3 1794 aa30.93■■■□□ 2.54
SNHG6-204ENST00000521127 ATP10AO60312 1499 aa30.93■■■□□ 2.54
SNHG6-204ENST00000521127 MYO5CQ9NQX4 1742 aa30.91■■■□□ 2.54
SNHG6-204ENST00000521127 KIF14Q15058 1648 aa30.9■■■□□ 2.54
SNHG6-204ENST00000521127 CDK11AQ9UQ88 783 aaPredicted RBP30.89■■■□□ 2.54
SNHG6-204ENST00000521127 ARHGEF12Q9NZN5 1544 aa30.88■■■□□ 2.53
SNHG6-204ENST00000521127 C9orf84Q5VXU9 1444 aa30.88■■■□□ 2.53
SNHG6-204ENST00000521127 TROQ12816 1431 aaPredicted RBP30.85■■■□□ 2.53
SNHG6-204ENST00000521127 AFAP1Q8N556 730 aa30.83■■■□□ 2.53
SNHG6-204ENST00000521127 CEBPAP49715 358 aaPredicted RBP30.81■■■□□ 2.52
SNHG6-204ENST00000521127 LRRIQ1Q96JM4 1722 aa30.8■■■□□ 2.52
SNHG6-204ENST00000521127 ZNF518AQ6AHZ1 1483 aa30.8■■■□□ 2.52
SNHG6-204ENST00000521127 ARHGAP5Q13017 1502 aa30.79■■■□□ 2.52
SNHG6-204ENST00000521127 CHIC1Q5VXU3 224 aa30.78■■■□□ 2.52
SNHG6-204ENST00000521127 KDM5CP41229 1560 aa30.78■■■□□ 2.52
SNHG6-204ENST00000521127 CERKQ8TCT0 537 aa30.76■■■□□ 2.51
SNHG6-204ENST00000521127 CLIP1P30622 1438 aa30.75■■■□□ 2.51
SNHG6-204ENST00000521127 PREX1Q8TCU6 1659 aa30.73■■■□□ 2.51
SNHG6-204ENST00000521127 DIP2CQ9Y2E4 1556 aa30.71■■■□□ 2.51
SNHG6-204ENST00000521127 CDC42BPBQ9Y5S2 1711 aa30.71■■■□□ 2.51
SNHG6-204ENST00000521127 MYT1LQ9UL68 1186 aa30.69■■■□□ 2.5
SNHG6-204ENST00000521127 MLH3Q9UHC1 1453 aa30.66■■■□□ 2.5
SNHG6-204ENST00000521127 TRAPPC8Q9Y2L5 1435 aa30.65■■■□□ 2.5
SNHG6-204ENST00000521127 REREQ9P2R6 1566 aa30.65■■■□□ 2.5
SNHG6-204ENST00000521127 ABCA6Q8N139 1617 aa30.65■■■□□ 2.5
SNHG6-204ENST00000521127 SETD1BQ9UPS6 1966 aaKnown RBP30.65■■■□□ 2.5
SNHG6-204ENST00000521127 STRCQ7RTU9 1775 aa30.63■■■□□ 2.49
SNHG6-204ENST00000521127 CASKIN1Q8WXD9 1431 aa30.63■■■□□ 2.49
SNHG6-204ENST00000521127 PREX2Q70Z35 1606 aa30.62■■■□□ 2.49
SNHG6-204ENST00000521127 ABCC1P33527 1531 aa30.61■■■□□ 2.49
SNHG6-204ENST00000521127 UHRF1BP1Q6BDS2 1440 aa30.6■■■□□ 2.49
SNHG6-204ENST00000521127 CCDC18Q5T9S5 1454 aa30.58■■■□□ 2.49
SNHG6-204ENST00000521127 AGLP35573 1532 aa30.57■■■□□ 2.49
SNHG6-204ENST00000521127 ITSN2Q9NZM3 1697 aa30.57■■■□□ 2.48
SNHG6-204ENST00000521127 C3P01024 1663 aa30.55■■■□□ 2.48
SNHG6-204ENST00000521127 DMRT2Q9Y5R5 561 aa30.55■■■□□ 2.48
SNHG6-204ENST00000521127 KIDINS220Q9ULH0 1771 aa30.54■■■□□ 2.48
SNHG6-204ENST00000521127 CDC42BPAQ5VT25 1732 aa30.53■■■□□ 2.48
SNHG6-204ENST00000521127 ESF1Q9H501 851 aaKnown RBP30.48■■■□□ 2.47
SNHG6-204ENST00000521127 FYCO1Q9BQS8 1478 aa30.45■■■□□ 2.47
SNHG6-204ENST00000521127 PTPRTO14522 1441 aa30.45■■■□□ 2.46
SNHG6-204ENST00000521127 ZNF777Q9ULD5 760 aaPredicted RBP30.44■■■□□ 2.46
SNHG6-204ENST00000521127 SAMD9LQ8IVG5 1584 aa30.44■■■□□ 2.46
SNHG6-204ENST00000521127 GPATCH8Q9UKJ3 1502 aaKnown RBP30.42■■■□□ 2.46
SNHG6-204ENST00000521127 CNTLNQ9NXG0 1405 aa30.41■■■□□ 2.46
SNHG6-204ENST00000521127 HNRNPMP52272 730 aaKnown RBP eCLIP30.39■■■□□ 2.46
SNHG6-204ENST00000521127 SYCP2Q9BX26 1530 aa30.38■■■□□ 2.45
SNHG6-204ENST00000521127 SPAG9O60271 1321 aaKnown RBP30.37■■■□□ 2.45
SNHG6-204ENST00000521127 NCOA1Q15788 1441 aa30.35■■■□□ 2.45
SNHG6-204ENST00000521127 LTBP4Q8N2S1 1624 aa30.33■■■□□ 2.45
SNHG6-204ENST00000521127 ZMYM3Q14202 1370 aa30.32■■■□□ 2.44
SNHG6-204ENST00000521127 NPATQ14207 1427 aa30.31■■■□□ 2.44
SNHG6-204ENST00000521127 SUPT6HQ7KZ85 1726 aaKnown RBP30.31■■■□□ 2.44
SNHG6-204ENST00000521127 MROH2AA6NES4 1674 aa30.31■■■□□ 2.44
SNHG6-204ENST00000521127 KIAA1107Q9UPP5 1409 aa30.3■■■□□ 2.44
SNHG6-204ENST00000521127 ATP7AQ04656 1500 aa30.29■■■□□ 2.44
SNHG6-204ENST00000521127 CFDP1Q9UEE9 299 aaPredicted RBP30.29■■■□□ 2.44
SNHG6-204ENST00000521127 CAMSAP1Q5T5Y3 1602 aa30.26■■■□□ 2.44
SNHG6-204ENST00000521127 CCNB3Q8WWL7 1395 aa30.26■■■□□ 2.43
SNHG6-204ENST00000521127 PLEKHH2Q8IVE3 1493 aa30.25■■■□□ 2.43
SNHG6-204ENST00000521127 PLXNC1O60486 1568 aa30.25■■■□□ 2.43
SNHG6-204ENST00000521127 INO80Q9ULG1 1556 aaPredicted RBP30.25■■■□□ 2.43
SNHG6-204ENST00000521127 DISP3Q9P2K9 1392 aa30.25■■■□□ 2.43
SNHG6-204ENST00000521127 A2MP01023 1474 aa30.25■■■□□ 2.43
SNHG6-204ENST00000521127 ILDR2Q71H61 639 aa30.23■■■□□ 2.43
SNHG6-204ENST00000521127 CLTCQ00610 1675 aaKnown RBP30.22■■■□□ 2.43
SNHG6-204ENST00000521127 NCKAP5LQ9HCH0 1330 aa30.22■■■□□ 2.43
SNHG6-204ENST00000521127 MTUS2Q5JR59 1369 aa30.19■■■□□ 2.42
SNHG6-204ENST00000521127 GGT6Q6P531 493 aa30.18■■■□□ 2.42
SNHG6-204ENST00000521127 PTPRKQ15262 1439 aa30.18■■■□□ 2.42
SNHG6-204ENST00000521127 ZNF644Q9H582 1327 aaPredicted RBP30.18■■■□□ 2.42
SNHG6-204ENST00000521127 IQSEC2Q5JU85 1478 aa30.18■■■□□ 2.42
SNHG6-204ENST00000521127 MYO3AQ8NEV4 1616 aa30.14■■■□□ 2.41
SNHG6-204ENST00000521127 ZNF142P52746 1687 aaPredicted RBP30.13■■■□□ 2.41
SNHG6-204ENST00000521127 TIAM1Q13009 1591 aa30.12■■■□□ 2.41
SNHG6-204ENST00000521127 ZNF335Q9H4Z2 1342 aaPredicted RBP30.12■■■□□ 2.41
SNHG6-204ENST00000521127 MBD5Q9P267 1494 aa30.12■■■□□ 2.41
SNHG6-204ENST00000521127 PLA2R1Q13018 1463 aa30.1■■■□□ 2.41
SNHG6-204ENST00000521127 CEP170BQ9Y4F5 1589 aaPredicted RBP30.1■■■□□ 2.41
SNHG6-204ENST00000521127 ADGBQ8N7X0 1667 aa30.1■■■□□ 2.41
SNHG6-204ENST00000521127 PPP6R1Q9UPN7 881 aa30.09■■■□□ 2.41
SNHG6-204ENST00000521127 PKD2Q13563 968 aa30.08■■■□□ 2.41
SNHG6-204ENST00000521127 TCOF1Q13428 1488 aaKnown RBP30.07■■■□□ 2.4
SNHG6-204ENST00000521127 SPATA31D1Q6ZQQ2 1576 aa30.05■■■□□ 2.4
SNHG6-204ENST00000521127 EHBP1L1Q8N3D4 1523 aa30.05■■■□□ 2.4
SNHG6-204ENST00000521127 SOCS7O14512 581 aa30.04■■■□□ 2.4
SNHG6-204ENST00000521127 RTEL1-TNFRSF6BF6WH68 1400 aa30.04■■■□□ 2.4
SNHG6-204ENST00000521127 CEP162Q5TB80 1403 aa30.03■■■□□ 2.4
SNHG6-204ENST00000521127 DHX29Q7Z478 1369 aaKnown RBP30.02■■■□□ 2.4
SNHG6-204ENST00000521127 UBAP1LF5GYI3 381 aa29.99■■■□□ 2.39
SNHG6-204ENST00000521127 A2ML1A8K2U0 1454 aa29.99■■■□□ 2.39
SNHG6-204ENST00000521127 FBXO31Q5XUX0 539 aaPredicted RBP29.96■■■□□ 2.39
SNHG6-204ENST00000521127 DNMT1P26358 1616 aaKnown RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms