RNA–Protein interactions for RNA: ENST00000518585.1

CTNNA1-209, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-209ENST00000518585 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-209ENST00000518585 VGFO15240 615 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-209ENST00000518585 ZFP91Q96JP5 570 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-209ENST00000518585 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
CTNNA1-209ENST00000518585 ARSIQ5FYB1 569 aa9.68□□□□□ -0.86
CTNNA1-209ENST00000518585 MS4A4AQ96JQ5 239 aa9.68□□□□□ -0.86
CTNNA1-209ENST00000518585 ANKRD13DQ6ZTN6 518 aa9.67□□□□□ -0.86
CTNNA1-209ENST00000518585 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-209ENST00000518585 NLRP6P59044 892 aa9.64□□□□□ -0.87
CTNNA1-209ENST00000518585 RNF25Q96BH1 459 aaPredicted RBP9.63□□□□□ -0.87
CTNNA1-209ENST00000518585 TAOK2Q9UL54 1235 aa9.62□□□□□ -0.87
CTNNA1-209ENST00000518585 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
CTNNA1-209ENST00000518585 KHSRPQ92945 711 aaKnown RBP eCLIP9.6□□□□□ -0.872e-12■■■■□ 20.7
CTNNA1-209ENST00000518585 PBX2P40425 430 aa9.57□□□□□ -0.88
CTNNA1-209ENST00000518585 BCL11BQ9C0K0 894 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-209ENST00000518585 NUDT7P0C024 238 aa9.54□□□□□ -0.88
CTNNA1-209ENST00000518585 FBXO22Q8NEZ5 403 aa9.54□□□□□ -0.88
CTNNA1-209ENST00000518585 STK24Q9Y6E0 443 aa9.54□□□□□ -0.88
CTNNA1-209ENST00000518585 C2orf72A6NCS6 295 aa9.52□□□□□ -0.89
CTNNA1-209ENST00000518585 KIF3CO14782 793 aa9.5□□□□□ -0.89
CTNNA1-209ENST00000518585 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
CTNNA1-209ENST00000518585 MFRPQ9BY79 579 aa9.49□□□□□ -0.89
CTNNA1-209ENST00000518585 PLA2G2EQ9NZK7 142 aa9.49□□□□□ -0.89
CTNNA1-209ENST00000518585 STK25O00506 426 aa9.48□□□□□ -0.89
CTNNA1-209ENST00000518585 HCSTQ9UBK5 93 aa9.48□□□□□ -0.89
CTNNA1-209ENST00000518585 AXIN2Q9Y2T1 843 aa9.48□□□□□ -0.89
CTNNA1-209ENST00000518585 PCDHGA4Q9Y5G9 962 aa9.48□□□□□ -0.89
CTNNA1-209ENST00000518585 SLC34A2O95436 690 aa9.47□□□□□ -0.89
CTNNA1-209ENST00000518585 TMC2Q8TDI7 906 aa9.47□□□□□ -0.89
CTNNA1-209ENST00000518585 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-209ENST00000518585 POTEEQ6S8J3 1075 aa9.44□□□□□ -0.9
CTNNA1-209ENST00000518585 ADGRD1Q6QNK2 874 aa9.43□□□□□ -0.9
CTNNA1-209ENST00000518585 ARHGAP33O14559 1287 aa9.42□□□□□ -0.9
CTNNA1-209ENST00000518585 ECM2O94769 699 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-209ENST00000518585 TK2O00142 265 aa9.37□□□□□ -0.91
CTNNA1-209ENST00000518585 STAC3Q96MF2 364 aa9.37□□□□□ -0.91
CTNNA1-209ENST00000518585 PPP4R3BQ5MIZ7 849 aa9.33□□□□□ -0.92
CTNNA1-209ENST00000518585 KCNH8Q96L42 1107 aa9.33□□□□□ -0.92
CTNNA1-209ENST00000518585 PTCD2Q8WV60 388 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-209ENST00000518585 HRO43593 1189 aa9.31□□□□□ -0.92
CTNNA1-209ENST00000518585 PSEN2P49810 448 aa9.31□□□□□ -0.92
CTNNA1-209ENST00000518585 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
CTNNA1-209ENST00000518585 KCTD12Q96CX2 325 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-209ENST00000518585 TBC1D12O60347 775 aa9.29□□□□□ -0.92
CTNNA1-209ENST00000518585 KDM4FA0A1W2PPD8 638 aa9.28□□□□□ -0.92
CTNNA1-209ENST00000518585 PPP1R37O75864 691 aa9.27□□□□□ -0.93
CTNNA1-209ENST00000518585 FOXK1P85037 733 aa9.27□□□□□ -0.93
CTNNA1-209ENST00000518585 PLPP6Q8IY26 295 aa9.27□□□□□ -0.93
CTNNA1-209ENST00000518585 RGL2O15211 777 aa9.25□□□□□ -0.93
CTNNA1-209ENST00000518585 KCNK17Q96T54 332 aa9.25□□□□□ -0.93
CTNNA1-209ENST00000518585 GPHNQ9NQX3 736 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-209ENST00000518585 PTPN5P54829 565 aa9.22□□□□□ -0.93
CTNNA1-209ENST00000518585 DSG2Q14126 1118 aa9.2□□□□□ -0.94
CTNNA1-209ENST00000518585 PKD2Q13563 968 aa9.19□□□□□ -0.94
CTNNA1-209ENST00000518585 VPS9D1Q9Y2B5 631 aa9.19□□□□□ -0.94
CTNNA1-209ENST00000518585 RGS20O76081 388 aa9.18□□□□□ -0.94
CTNNA1-209ENST00000518585 NISCHQ9Y2I1 1504 aa9.17□□□□□ -0.94
CTNNA1-209ENST00000518585 GOLGA8CPA6NN73 597 aa9.16□□□□□ -0.94
CTNNA1-209ENST00000518585 ZNF454Q8N9F8 522 aa9.16□□□□□ -0.94
CTNNA1-209ENST00000518585 IFFO2Q5TF58 517 aa9.15□□□□□ -0.94
CTNNA1-209ENST00000518585 UPF1Q92900 1129 aaKnown RBP eCLIP9.14□□□□□ -0.95
CTNNA1-209ENST00000518585 SLC4A5Q9BY07 1137 aa9.14□□□□□ -0.95
CTNNA1-209ENST00000518585 IRX2Q9BZI1 471 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-209ENST00000518585 BCL2L12Q9HB09 334 aa9.14□□□□□ -0.95
CTNNA1-209ENST00000518585 PTPREP23469 700 aa9.12□□□□□ -0.95
CTNNA1-209ENST00000518585 THSD4Q6ZMP0 1018 aa9.12□□□□□ -0.95
CTNNA1-209ENST00000518585 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-209ENST00000518585 OXER1Q8TDS5 423 aa9.11□□□□□ -0.95
CTNNA1-209ENST00000518585 WNT2BQ93097 391 aa9.11□□□□□ -0.95
CTNNA1-209ENST00000518585 A0A0G2JS52 829 aa9.1□□□□□ -0.95
CTNNA1-209ENST00000518585 HS6ST3Q8IZP7 471 aa9.1□□□□□ -0.95
CTNNA1-209ENST00000518585 BHMG1C9JSJ3 638 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-209ENST00000518585 NBPF3Q9H094 633 aa9.08□□□□□ -0.96
CTNNA1-209ENST00000518585 FOSBP53539 338 aa9.07□□□□□ -0.96
CTNNA1-209ENST00000518585 ZBED2Q9BTP6 218 aa9.07□□□□□ -0.96
CTNNA1-209ENST00000518585 RYDENQ9NUL5 291 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-209ENST00000518585 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
CTNNA1-209ENST00000518585 JPH4Q96JJ6 628 aa9.04□□□□□ -0.96
CTNNA1-209ENST00000518585 ZDHHC16Q969W1 377 aa9.03□□□□□ -0.96
CTNNA1-209ENST00000518585 CRISPLD2Q9H0B8 497 aa9.03□□□□□ -0.96
CTNNA1-209ENST00000518585 CHGAP10645 457 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-209ENST00000518585 EVI5O60447 810 aa9□□□□□ -0.97
CTNNA1-209ENST00000518585 PDE4AP27815 886 aa9□□□□□ -0.97
CTNNA1-209ENST00000518585 ANO8Q9HCE9 1232 aaPredicted RBP9□□□□□ -0.97
CTNNA1-209ENST00000518585 ANKK1Q8NFD2 765 aa8.99□□□□□ -0.97
CTNNA1-209ENST00000518585 ADAM33Q9BZ11 813 aa8.99□□□□□ -0.97
CTNNA1-209ENST00000518585 PPP1R3GB7ZBB8 358 aa8.96□□□□□ -0.98
CTNNA1-209ENST00000518585 RABGEF1Q9UJ41 708 aa8.96□□□□□ -0.98
CTNNA1-209ENST00000518585 ITGBL1O95965 494 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-209ENST00000518585 MAP3K9P80192 1104 aa8.95□□□□□ -0.98
CTNNA1-209ENST00000518585 Q6ZNB5 142 aa8.94□□□□□ -0.98
CTNNA1-209ENST00000518585 DNAJC5Q9H3Z4 198 aa8.94□□□□□ -0.98
CTNNA1-209ENST00000518585 NKX1-1Q15270 411 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-209ENST00000518585 NYAP1Q6ZVC0 841 aa8.93□□□□□ -0.98
CTNNA1-209ENST00000518585 NCKAP5LQ9HCH0 1330 aa8.93□□□□□ -0.98
CTNNA1-209ENST00000518585 DDX27Q96GQ7 796 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-209ENST00000518585 LAPTM4BQ86VI4 370 aa8.91□□□□□ -0.98
CTNNA1-209ENST00000518585 LARP6Q9BRS8 491 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-209ENST00000518585 BCAMP50895 628 aa8.9□□□□□ -0.98
CTNNA1-209ENST00000518585 PROX2Q3B8N5 592 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms